prot_E-siliculosus-1a_F_contig1160.1047.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1160.1047.1
Unique Nameprot_E-siliculosus-1a_F_contig1160.1047.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length516
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1160.1047.1 vs. uniprot
Match: A0A6H5KTJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ7_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 2.010e-135
Identity = 338/396 (85.35%), Postives = 344/396 (86.87%), Query Frame = 0 
Query:  135 CVY---YNVHTYQQSILSEMGTLIAAANAKANPGGVNVAPQKVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLITTQNKIITDELEQKLGMNLASLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAAIKAASANPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVPVKMEDVKPTVVTKPMATPAVPASHHVVQQAHLAPQQHAVVAPQPVAPAQVKLPPTSVAVAGTASAPLVIGASPDPTPVVAAAPPAPAAXXXXXXXXXXXXXXXXXXXXXXXX--------------GVAQHGQTPVYGGQAPGAAXXXXXXXXXQQ-RAAPQAPTAPAXXXXXXXXXXXXPPAYTKPKVYNDVDPRTGLQKV 512
            C+Y   + +    +SILSEMGTLIAAANAKANPGGVNVAPQ+VVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLI TQNKIITDELEQKLGMNL SLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAAIKAASANPG XXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXX AAVPVKMEDVKPTVVTKPMA PA   SHHVVQQAHLAPQQ AVVAPQPVAPAQVKLPPTSVAVAGTASAPLVIGASPD TPV AAAPP    XXXXXXXXXXXXXXXXXXXXXXXX              GVAQH QTPVYGGQAPGAAXXXXXXXXX   RAAPQAPTA A  XXXXXXXXXX PAYTKPKVYNDVDPRTGLQK+
Sbjct:    2 CLYSGEFPLDDCSKSILSEMGTLIAAANAKANPGGVNVAPQRVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLINTQNKIITDELEQKLGMNLTSLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAAIKAASANPG-XXXXXXXXXXXXXXXXXXXXXXXXXXPQVVAMPXXXXXXXPAAVPVKMEDVKPTVVTKPMAAPAAATSHHVVQQAHLAPQQQAVVAPQPVAPAQVKLPPTSVAVAGTASAPLVIGASPDSTPVAAAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAQHSQTPVYGGQAPGAAXXXXXXXXXXXXRAAPQAPTAHAPAXXXXXXXXXXXPAYTKPKVYNDVDPRTGLQKL 396
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BLAST of mRNA_E-siliculosus-1a_F_contig1160.1047.1 vs. uniprot
Match: D8LCB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB6_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 6.240e-64
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:  151 MGTLIAAANAKANPGGVNVAPQKVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLITTQNKIITDELEQKLGMNLASLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAAIKA 273
            MGTLIAAANAKANPGGVNVAPQKVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLITTQNKIITDELEQKLGMNLASLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAA+KA
Sbjct:    1 MGTLIAAANAKANPGGVNVAPQKVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLITTQNKIITDELEQKLGMNLASLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAAMKA 123
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1160.1047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTJ7_9PHAE2.010e-13585.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCB6_ECTSI6.240e-6499.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1160contigE-siliculosus-1a_F_contig1160:2069..5664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1160.1047.1mRNA_E-siliculosus-1a_F_contig1160.1047.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1160 697..5774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1160.1047.1 ID=prot_E-siliculosus-1a_F_contig1160.1047.1|Name=mRNA_E-siliculosus-1a_F_contig1160.1047.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=516bp
MSQQQDDEGLPSQLTHALLSEDSRSELPPRRQADMLTPAPAVVAAASAYA
PFAARPVAAPVAAPGLVRTAPVAAPTLPQPPQQQQQQQQVVAPQQQQQAA
AAAQPQQQQVRQGAAVAVRWQNKNETAAQTAIWNCVYYNVHTYQQSILSE
MGTLIAAANAKANPGGVNVAPQKVVDHLKAAVKRMNVRLIELRSGNSTKI
EYNTTIMSKLITTQNKIITDELEQKLGMNLASLAPHLDLEGELKKRSDTA
YLAVKNKVDRAKRSEAHKAAIKAASANPGGGAGSSNSPAVAMAAAAVAAA
SMPRPPQVVATPAAAAAAAAPAAVPVKMEDVKPTVVTKPMATPAVPASHH
VVQQAHLAPQQHAVVAPQPVAPAQVKLPPTSVAVAGTASAPLVIGASPDP
TPVVAAAPPAPAAAPAAAPAAAATSAAAAATPAAAPAGVAQHGQTPVYGG
QAPGAAPPHAAGAAAQQRAAPQAPTAPAPAPVPQQSAPPPPPAYTKPKVY
NDVDPRTGLQKVGPR*
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