prot_E-siliculosus-1a_F_contig1159.1035.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1159.1035.1
Unique Name	prot_E-siliculosus-1a_F_contig1159.1035.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	1082

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1035.1 vs. uniprot
Match: D7G0P3_ECTSI (Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P3_ECTSI)

HSP 1 Score: 1273 bits (3295), Expect = 0.000e+0
Identity = 784/1031 (76.04%), Postives = 796/1031 (77.21%), Query Frame = 0

Query:   73 LLTDTVQVMHSQIALLRQTVLDLRETKAQEIGDLRRHIDALEKSGPGNAKALFDDIDSRLRAVEQQPGGSGMSAGDSERLYLLEGAVWGGGTAVRKSLDMDIGESSEEDAPTEVNTPDEXXXXXXXXXXXXXXXXXXTSTAVEDIGIDXXXXXXXXXXXREEKQAAAATARKSPKMKTVAKTVLMLGGGMALCPKVDTLQSQVGTIGEREDQIETRVAALERKLLADAEGAKAAAAERKRKLLDRLMRQTIVLRNTLIADGMAAGTEGGSEGESDAAQEEDCWAGVREDMVRGGGXXXXXXXXXDEEELILTARARLAWLETYAEDTPSSGGITGSGPAGSADDAETERNDQPATSDNGDIDVVVPEEGGTPASGMSDGVGQRRAEGALPAEAWAAPGDEGGGGRXXXXWAGRPRSSGGTGGGDADGEVAQLWRWMDEIESRIYRRCPDGGRLPSRGSGDVVTSKAAEVTGADLQNLQDSVELSSLAMGNKLEEGLATLGERMDLLEGNVRSVKARALSSG----------------------HPPXXLVIAPPDDSRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEATVAEDGAGQAGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXXAAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEELAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDATVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGSIKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSSSRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAHERXXXXXXXXXXXXXXXXXRAETAGAVGDGGRRAGDSGGGGRITIGASSSQILPPSDAVLGPGGIDASRDGRLPGIPNMLDSASAGGRETGGGAGVVGGVVGVGGRNKRVSVGSLAASSDAPHRGRFVRQR 1081
            L  DTVQVMHSQIALLRQTVLDLRETKAQEIGDLRR IDALE SGPGNAKA FDDIDSRLRAVEQQPGGSGM                                                                                                                                  VGTIGERED+IE+RVAALERKLLADAEGAKAAAAERKR+LLDRLMRQTIVLRNT+IA+GMAAGTEG SEGES+AAQEEDCWAGVREDMVRGG          DEEELILTARARLAWLE+ AE+TPSSGGI GSGPAGS DDAETERNDQPATSDNGDID+VVPEEGGTPASGMSD VGQRRA GALPAEAW APGDEG    XXXX             GDADGEVA+LWRWMDEIESRIYRRC D GRLPSRG+GDVVTSKA EVTGADLQNLQDSVELSSLAMGNKLEEGLATL ERM+LLEGNVRSVKARALS                           XX       DSRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEATVAEDGAG AGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXX AEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEELAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDATVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGSIKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSSSRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAHER  XXXXXXXXXXXXXXX  ETAGAVGDG                    QILPPSD VLGPGGIDASRDGRLPGIPNMLDS SAGGRETGGGAGVVGGVVGVGGRNKRVSVGSLAASSDAPHRGRFVRQR
Sbjct:    6 LCKDTVQVMHSQIALLRQTVLDLRETKAQEIGDLRRQIDALETSGPGNAKARFDDIDSRLRAVEQQPGGSGM----------------------------------------------------------------------------------------------------------------------------------VGTIGEREDRIESRVAALERKLLADAEGAKAAAAERKRRLLDRLMRQTIVLRNTIIAEGMAAGTEGRSEGESEAAQEEDCWAGVREDMVRGGRGSGGVGQAADEEELILTARARLAWLESCAENTPSSGGIAGSGPAGSGDDAETERNDQPATSDNGDIDLVVPEEGGTPASGMSDDVGQRRAAGALPAEAWTAPGDEGXXXXXXXXXXXXXXXXXXXXXGDADGEVARLWRWMDEIESRIYRRCSDRGRLPSRGAGDVVTSKAGEVTGADLQNLQDSVELSSLAMGNKLEEGLATLDERMNLLEGNVRSVKARALSRSALDAVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXDSRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEATVAEDGAGGAGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXXXAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEELAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDATVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGSIKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSSSRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAHERQRXXXXXXXXXXXXXXXXXETAGAVGDGXXXXXXXXXXXXXXXXXXXXQILPPSDEVLGPGGIDASRDGRLPGIPNMLDSTSAGGRETGGGAGVVGGVVGVGGRNKRVSVGSLAASSDAPHRGRFVRQR 906

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1159.1035.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1159.1035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G0P3_ECTSI	0.000e+0	76.04	Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 654..674
None	No IPR available	COILS	Coil	Coil	coord: 684..711
None	No IPR available	COILS	Coil	Coil	coord: 297..317
None	No IPR available	PANTHER	PTHR34491:SF3	HOLOCENTRIC CHROMOSOME BINDING PROTEIN-RELATED	coord: 76..982
None	No IPR available	PANTHER	PTHR34491	FAMILY NOT NAMED	coord: 76..982

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1159	contig	E-siliculosus-1a_F_contig1159:26350..33045 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1159.1035.1	mRNA_E-siliculosus-1a_F_contig1159.1035.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1159 26350..33045 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1159.1035.1 ID=prot_E-siliculosus-1a_F_contig1159.1035.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1035.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1082bp
MTSEEDEEESKAAFEGEEQTGRKASSAADHQGYGDAPSPVHHVAISSKLE
DEWPEIELGGEKGLVVCSIDVQLLTDTVQVMHSQIALLRQTVLDLRETKA
QEIGDLRRHIDALEKSGPGNAKALFDDIDSRLRAVEQQPGGSGMSAGDSE
RLYLLEGAVWGGGTAVRKSLDMDIGESSEEDAPTEVNTPDEPDEPDEPAA
AAAAAAAAATSTAVEDIGIDDEGGDGEGGEGREEKQAAAATARKSPKMKT
VAKTVLMLGGGMALCPKVDTLQSQVGTIGEREDQIETRVAALERKLLADA
EGAKAAAAERKRKLLDRLMRQTIVLRNTLIADGMAAGTEGGSEGESDAAQ
EEDCWAGVREDMVRGGGGSGGDGQAADEEELILTARARLAWLETYAEDTP
SSGGITGSGPAGSADDAETERNDQPATSDNGDIDVVVPEEGGTPASGMSD
GVGQRRAEGALPAEAWAAPGDEGGGGRGGRGWAGRPRSSGGTGGGDADGE
VAQLWRWMDEIESRIYRRCPDGGRLPSRGSGDVVTSKAAEVTGADLQNLQ
DSVELSSLAMGNKLEEGLATLGERMDLLEGNVRSVKARALSSGHPPPPLV
IAPPDDSRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEATVAEDGAGQA
GLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARRAR
EEREAAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEE
LAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDA
TVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGS
IKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSS
SRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAH
ERQRQHQHQHRQQQQQQRHRAETAGAVGDGGRRAGDSGGGGRITIGASSS
QILPPSDAVLGPGGIDASRDGRLPGIPNMLDSASAGGRETGGGAGVVGGV
VGVGGRNKRVSVGSLAASSDAPHRGRFVRQR*