prot_E-siliculosus-1a_F_contig115.982.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig115.982.1
Unique Nameprot_E-siliculosus-1a_F_contig115.982.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length311
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 578 bits (1489), Expect = 1.120e-207
Identity = 290/310 (93.55%), Postives = 299/310 (96.45%), Query Frame = 0
Query:    1 MGCCSVTAPDLALRAATSRFLKPGPFVAYKGLFVAYFLTWCFLWPLEYNSMYLFATYWVWYTGSAYFALSFATACTHFRRWSAATQAAAPEHGSGGGGSDRPGPSWTNLTGDVSTPVLRTRIHPFEQAVLAIQLFTWNVACLGSLFVAIIYWTSLYTGAPITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLAQELIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAESSSGVLNDRLLSAEDGGSSTQSESVTSHVPQTGTDLAAIEDV 310
            MGCCSVTAPDLALRAATSRFLKPGPFVA+KGLFVAYFL WCFLWPL+Y SMYLFATYWVWYTG+AYFALSFATAC HFRRWSAATQA AP++GS GGGSDRPGPSW+NLTGDVSTP LRTRIHP EQAVLAIQLFTWNVACLGSLFVAIIYW+SLYTG PITSVDMNAHTLIAFVMVADQ+LVATPFRIRDMWKAEVFAITYLVYSLLWYFL QELIYVILDWDRHFWEAF YSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAE+SSGVLNDRLLSAEDGGSSTQSESVTSHVPQTGTDLAAIE V
Sbjct:    1 MGCCSVTAPDLALRAATSRFLKPGPFVAFKGLFVAYFLIWCFLWPLDYTSMYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQARAPDNGSAGGGSDRPGPSWSNLTGDVSTPALRTRIHPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGTPITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFLEQELIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAEASSGVLNDRLLSAEDGGSSTQSESVTSHVPQTGTDLAAIETV 310          
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 6.260e-43
Identity = 96/266 (36.09%), Postives = 144/266 (54.14%), Query Frame = 0
Query:    9 PDLALRAATSRFLKPGPFVAYKGLFVAYFLTWCFLWPL--EYNSMYLFATYWVWYTGSAYFALSFATACTHFRRWSAA------TQAAAPEHGSGGGGSDRPGPSWTNLTGDVSTPVLRTRIHPFEQAVLAIQLFTWNVACLGSLFVAIIYWTSLYTGAPITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLAQE---LIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHYYIFRLRESIYATC 263
            P+  +RA TSRFL    F+ YK +   YF+ WC+ WP   + +  + F TYW WY  + YF +S ATA +      A+      T A AP  G                  + + P+   R     +A+L  Q+F+WNVAC+GSL +  ++W +L+   P+TS D+NAH LIA VM  DQLLVAT F  + M  + +F+I Y+ ++++++  A E   +IY  +DW      +  ++    FVL+P   ++HY +FRLRE IY TC
Sbjct:   15 PNDPVRAVTSRFLSQRSFLCYKVIATIYFVFWCYFWPFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFLGSPMASDGPVRGTHAVAPHRG------------------NRNQPLSSNR-----RALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYETC 257          
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 3.480e-29
Identity = 64/163 (39.26%), Postives = 97/163 (59.51%), Query Frame = 0
Query:  115 TPVLRTRIHPFE---QAVLAIQLFTWNVACLGSLFVAIIYWTSLYTGAPITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLAQE---LIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAESSS 271
            TP    R  P     +A+L  Q+F+WNVAC+GSL +  ++W +L+   P+TS D+NAH LIA +M  DQLLVAT F  + M  +  F+I Y+ ++++++  A E   +IY  +DW      +  ++    FVL+P   ++HY +FRLRE IY TC   +  SS
Sbjct:   14 TPHRGNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIYETCGSGSRPSS 176          
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.440e-17
Identity = 54/165 (32.73%), Postives = 88/165 (53.33%), Query Frame = 0
Query:  109 LTGDVSTPVLRTRIHPFEQAVLAIQLFTWNVACLGSLFVAIIYWTSLYTGAP---ITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLAQE----LIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQR 266
            L G+V  PV R         +  +QL  WN+AC+ SL V  ++ T  Y       + + D+ AH L+AF M+ DQLL+A  +++  M   +++ + YL +S++W++   E    L    LDWD +  +A L     + VL+P   +LH  +FRLRE++Y   R +
Sbjct:   85 LDGNVQPPVPR--------GLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDK 241          
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 9.380e-17
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 0
Query:  124 PFEQAVLAIQLFTWNVACLGSLFVAIIYWTSLYTGAP---ITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLAQE----LIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQR 266
            P  + +  +QL  WN+AC+ SL V  ++ +  Y         + D+ AH L+AF M+ DQLL+A  F++  M   +++ + YL +S++W++   E    L    LDW  +  +A L     + VL+P   +LH  +FRLRE++Y   R +
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGTKNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALYGRVRDK 159          
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Match: A0A1S3KB91_LINUN (protein rolling stone n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KB91_LINUN)

HSP 1 Score: 55.8 bits (133), Expect = 2.600e-5
Identity = 41/142 (28.87%), Postives = 70/142 (49.30%), Query Frame = 0
Query:  137 WNVACLGSLFVAIIYW-----TSLYTGAPITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLAQ------ELIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRA 267
            +N++   ++ VA +YW       L  G  I  +D+  H   A  +++D  + ATP RI     + ++AI YL++S+++  L          IY  LDWD     A +Y+V    V +P    + Y ++RLR ++Y  C  R+
Sbjct:  127 YNISSNAAIVVAALYWGLRIPPKLAAGGEIHYMDVGTHLGNAIYVLSDIFITATPVRIYHFLHSSLYAIVYLIFSVVYDVLKGTNAVEGSYIYPQLDWDVP-GTAAIYAVLVALVAVPLVQCVLYGLYRLRLALYGCCCPRS 267          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig115.982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G736_ECTSI1.120e-20793.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMZ5_9PHAE6.260e-4336.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G735_ECTSI3.480e-2939.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVA0_9PHAE3.440e-1732.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX10_ECTSI9.380e-1732.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1S3KB91_LINUN2.600e-528.87protein rolling stone n=2 Tax=Lingula unguis TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 23..271
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 23..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 253..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 219..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 166..185
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig115contigE-siliculosus-1a_F_contig115:58934..66380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig115.982.1mRNA_E-siliculosus-1a_F_contig115.982.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig115 58797..67676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig115.982.1 ID=prot_E-siliculosus-1a_F_contig115.982.1|Name=mRNA_E-siliculosus-1a_F_contig115.982.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=311bp
MGCCSVTAPDLALRAATSRFLKPGPFVAYKGLFVAYFLTWCFLWPLEYNS
MYLFATYWVWYTGSAYFALSFATACTHFRRWSAATQAAAPEHGSGGGGSD
RPGPSWTNLTGDVSTPVLRTRIHPFEQAVLAIQLFTWNVACLGSLFVAII
YWTSLYTGAPITSVDMNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAI
TYLVYSLLWYFLAQELIYVILDWDRHFWEAFLYSVAGIFVLIPATSVLHY
YIFRLRESIYATCRQRAESSSGVLNDRLLSAEDGGSSTQSESVTSHVPQT
GTDLAAIEDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost