prot_E-siliculosus-1a_F_contig1143.944.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1143.944.1
Unique Nameprot_E-siliculosus-1a_F_contig1143.944.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length838
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: D7FRR0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRR0_ECTSI)

HSP 1 Score: 1351 bits (3496), Expect = 0.000e+0
Identity = 760/795 (95.60%), Postives = 766/795 (96.35%), Query Frame = 0
Query:   43 MRRIARTHWDADGPLDHRENLSPRSQQLDGEYLLPLACGDDSFGDHTGGGAXXXXXXXXXXXXXXXXXXXSSLASGMEAGVSTGSPRAGGIGSVGAGVTSPRDRDVSGGGGGRKRGKGDRRRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPWLAAIPLCVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLVPVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATSLQGRGAAASPSGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGGESFWVEAGGAAPARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAVMTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMILEHGRPGSSVRPETTCPWLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIAAKTASSSASELKKGRGQPSPSLAPSLTXXXXXXXXXXXXXXXXAERCAADNAADPNAANSLSEPSPANASLLLAARAAVAGTSAFGDACGRGDTRDRSPKATEGGGSGGGARDSRGAGNGNEGEALLQPAQEAMRRMIVHIDTLDPYPCVLGIPVKPALFATSKVYVFGCFAVISVKLMYDVISGVV 837
            MRRIARTHWDADGPLDHRENLSPRSQQLDGEYLLPLACGDDSFGDHTGGGAXXXXXXXXXXXXXXXXXXX  LASGMEAG+STGSPRAGGIGSVGAGVTSPRDRDVSGGGGGRKRGK DRRRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPWLAAIP+CVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLVPVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATS QGRGAAAS SGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGGE+FWVEA  A+PARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAVMTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMILEHGRPGSSVRPETTCPWLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIAAKTASSSASELKK RGQPSPSL     XXXXXXXXXXXXXXX AER AADNAA PNAANS+SEPSPANASLL AARAAV GTSA GDA GR DTRDRSPKA E GGSGGGAR   GAGN  EGEALL PAQEAMRRMIVHIDTLDPYPCVLGIPVKPALFATSKVYVFGCFAVISVKLMYDVISG+V
Sbjct:    1 MRRIARTHWDADGPLDHRENLSPRSQQLDGEYLLPLACGDDSFGDHTGGGAXXXXXXXXXXXXXXXXXXXXXLASGMEAGISTGSPRAGGIGSVGAGVTSPRDRDVSGGGGGRKRGKRDRRRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPWLAAIPVCVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLVPVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATSPQGRGAAASTSGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGGENFWVEADRASPARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAVMTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMILEHGRPGSSVRPETTCPWLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIAAKTASSSASELKKERGQPSPSLXXXXXXXXXXXXXXXXXXXXAAERGAADNAAHPNAANSVSEPSPANASLLAAARAAVTGTSALGDAGGRRDTRDRSPKAAEDGGSGGGARGIGGAGN--EGEALLHPAQEAMRRMIVHIDTLDPYPCVLGIPVKPALFATSKVYVFGCFAVISVKLMYDVISGIV 793          
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: A0A7S3M970_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M970_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.480e-58
Identity = 109/214 (50.93%), Postives = 143/214 (66.82%), Query Frame = 0
Query:  433 RAFELRERMILEHGRPGSSVRPETTCPWLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNL 646
            +AFE+R+ +I   G PGSSVRPE +  W+ FG+ AA TFTL+GW  W  LP +    ++I  N+ T L S L+LH+ F GRL+ALY+ N  RV+ L++LL  G +  EE      ++WW  R+FVL +DLSLDYD+GGL VSATF I L  F   I Q+VREGL  ML PPGSY AYA +Y+T CLI++F LAT TY EQ  H+ ++Q   + L
Sbjct:    3 KAFEMRQTLIERFGSPGSSVRPEGSATWIFFGVTAALTFTLLGWHNWYVLPPSNTATLLIILNLLTILMSTLILHLSFFGRLLALYKRNYHRVECLTQLL--GKTDKEE-----LDSWWNCRNFVLNDDLSLDYDIGGLAVSATFLIALLLFGALITQLVREGLQGMLEPPGSYLAYACLYITCCLIKLFTLATNTYEEQHRHIAVLQGISNGL 209          
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: A0A482RT25_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RT25_9ARCH)

HSP 1 Score: 187 bits (475), Expect = 2.100e-50
Identity = 111/291 (38.14%), Postives = 160/291 (54.98%), Query Frame = 0
Query:  163 RRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPWLAAIPLCVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLVPVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATSLQGRGAAASPSGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGGESFWVEAGGAAPARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAVMTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMILEHGRPGSSVR 453
            R+F LR+HKF FQ +L LHF +C+LS+  PF  SG+   A +PL VW FY+ +F++   +A+ V+PGF + K SF + +EEF  P+L+PVLS+SFL V +++ +T   LGGPPLC   C TCL SW +                      S S  SP             DS++   +R                                 CGYANGKELLAYYT+SQ++ L++  V+  ++ C+AW+V+EEE+ +R+ AE+ LK ++P A+ELR  +I  HG P S +R
Sbjct:   27 RKFSLRVHKFSFQWDLVLHFLICLLSLC-PFFFSGNRLFALLPLSVWVFYHVLFILNPNQANLVIPGFGKLKHSFKSTIEEFFSPKLLPVLSISFLLVALSLGVTGHTLGGPPLCYHPCGTCLSSWTN----------------------SISLSSP-------------DSSSINSYRHG-------------------------------CGYANGKELLAYYTMSQTSFLLFCVVVLSMVVCMAWRVAEEEIEEREQAEAWLKRESPLAYELRGEVIGTHGPPASPIR 250          
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: A0A482S024_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S024_9ARCH)

HSP 1 Score: 179 bits (454), Expect = 1.220e-47
Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 0
Query:  460 WLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIAAKTASSSASELKKG 664
            W+ FG+ AA TFTL+GW  W  L  +    ++I  N+ T + ++L+LH+GF GRLIALY  N  RV  +++LL    + A+    H  + WW  RSFVL +DLSLDYD+GGL VS TF + +   +V    +  +G   ML PPGSYCAY+ +Y+T CLIRIF LAT TY EQQ H+ ++Q     L+   ++     A  L  G
Sbjct:    2 WVFFGITAAITFTLLGWHNWHILSPSPSATLLIVLNLLTIITTILILHLGFFGRLIALYTRNFHRVAHITRLLHSQHAHAQGSTTHELDVWWNARSFVLNDDLSLDYDIGGLAVSLTFVLNVIVGIVLATVLYDQGYAGMLEPPGSYCAYSCMYITSCLIRIFQLATSTYTEQQTHLSLLQQMSVRLMMAGSEVGGYGAGNLNGG 206          
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: A0A7S3M8A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8A9_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.610e-44
Identity = 103/280 (36.79%), Postives = 157/280 (56.07%), Query Frame = 0
Query:  163 RRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPWLAAIPLCVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLVPVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATSLQGRGAAASPSGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGGESFWVEAGGAAPARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAVMTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMI 442
            ++F LR+HKF FQ ELA+H  +CI+S+A PF  +G    + +P+ VW FYN +F++G + ++ V+P F R K SF   +EEF  P+L+PVLS+SFL VV+++ +T  RLGGPPLC   C  CL +WKH+ P ++     AAA+               I   ++      D                 +++ V                   CGYANGKE+L YYT+ Q++ L+++ V+  +L CLAW+V++EE  +R+ AE  LK    +AFE+R+ +I
Sbjct:   55 KKFSLRVHKFAFQWELAIHLVVCIISLA-PFFFTGRRVFSLLPISVWLFYNVLFLIGPQHSNKVIPRFGRIKNSFKNNIEEFFSPKLLPVLSISFLCVVLSLAVTGHRLGGPPLCYHPCGVCLATWKHSIPLSA-----AAAALVARVDPLMQPLVTPIDSPYDPLVGRMDPLV--------------DAYRV------------------GCGYANGKEMLGYYTMGQTSFLLFIVVVVAILVCLAWRVADEEKTERRTAEEWLKRDALKAFEMRQTLI 296          
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: A0A7S2B501_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B501_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.780e-44
Identity = 115/289 (39.79%), Postives = 129/289 (44.64%), Query Frame = 0
Query:  546 AAEAWWFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAMLNPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIAAKTASSSASELKKGRGQPSPSLAPSLTXXXXXXXXXXXXXXXXAERCAADNAADPNAANSLSEPSPANASLLLAARAAVAGTSAFGDACGRGDTRDRSPKATEGGGSGGGARDSRGAGNGNEGEALLQPAQEAMRRMIVHIDTLDPYPCVLGIPVKPALFATSKVYVFGCFAVISVKLMYDVIS 834
            A  AWW +RSFVL EDLSLDYD+GGLGVSATF IVL SF+VA+ QIVREGL AML+PPGSYCAYASVYLTVCLIRIF LAT T+ +QQ HV +       LVA   K   S                                                                                       TRD +                       E +  L+   E M  M   I   DPYPCVLGIPVKPALF T+KVYVF CF VI  ++  DVI 
Sbjct:   14 AIHAWWSVRSFVLAEDLSLDYDIGGLGVSATFVIVLVSFIVAVVQIVREGLHAMLSPPGSYCAYASVYLTVCLIRIFSLATLTFKQQQSHVAM-------LVAQEEKLLES---------------------------------------------------------------------------------------TRDDA-----------------------EEQLQLKAVFECMEDMRTQIHQFDPYPCVLGIPVKPALFTTAKVYVFICFVVIGTRIFCDVIK 185          
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Match: A0A7S2B4U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B4U9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.690e-7
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  478 KWGDLPVTAVTVVVIGANVTTTLASVLMLHVGFHGRLIALYQGNLQRVQFLSKLL 532
            +W +LP T  + ++I  NV T   S+++LHVGF+GRL ALYQ NL RVQFLS+ L
Sbjct:    4 EWQELPFTVASSIIICVNVATIFISIIILHVGFYGRLNALYQRNLSRVQFLSRCL 58          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1143.944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FRR0_ECTSI0.000e+095.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3M970_9STRA2.480e-5850.93Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482RT25_9ARCH2.100e-5038.14Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482S024_9ARCH1.220e-4743.90Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S3M8A9_9STRA2.610e-4436.79Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2B501_9STRA4.780e-4439.79Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2B4U9_9STRA1.690e-754.55Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 507..567
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 624..837
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 568..591
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 477..481
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..269
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 603..623
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 482..506
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 389..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 270..388
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 457..476
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 592..602
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 411..456
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..220
NoneNo IPR availableTMHMMTMhelixcoord: 388..410
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 244..266
NoneNo IPR availableTMHMMTMhelixcoord: 602..624
NoneNo IPR availableTMHMMTMhelixcoord: 570..592
NoneNo IPR availableTMHMMTMhelixcoord: 457..476
NoneNo IPR availableTMHMMTMhelixcoord: 486..508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1143contigE-siliculosus-1a_F_contig1143:18706..25352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1143.944.1mRNA_E-siliculosus-1a_F_contig1143.944.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1143 17329..25397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1143.944.1 ID=prot_E-siliculosus-1a_F_contig1143.944.1|Name=mRNA_E-siliculosus-1a_F_contig1143.944.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=838bp
MSRTPLLSGVRKRTLTRARGGQGKSGTTGSSWCAEQQVFGRDMRRIARTH
WDADGPLDHRENLSPRSQQLDGEYLLPLACGDDSFGDHTGGGAGGVGSAG
AGGAAGGGGGGGSSLASGMEAGVSTGSPRAGGIGSVGAGVTSPRDRDVSG
GGGGRKRGKGDRRRFFLRIHKFVFQKELALHFSMCILSIAIPFSLSGSPW
LAAIPLCVWCFYNAMFVMGAKRASTVLPGFDRFKRSFVAAMEEFLPPRLV
PVLSLSFLSVVIAVTLTAARLGGPPLCISSCRTCLGSWKHAHPATSLQGR
GAAASPSGEASRSRSKFSPNIVGAFEGAKRGRDSAAAGDHRQAGGSGGGG
ESFWVEAGGAAPARGSQRAKSGEACGYANGKELLAYYTVSQSAILIYLAV
MTGLLTCLAWKVSEEELAQRQAAESRLKGQNPRAFELRERMILEHGRPGS
SVRPETTCPWLMFGLVAACTFTLIGWRKWGDLPVTAVTVVVIGANVTTTL
ASVLMLHVGFHGRLIALYQGNLQRVQFLSKLLREGTSKAEEPWVHAAEAW
WFLRSFVLREDLSLDYDVGGLGVSATFFIVLASFVVAIAQIVREGLDAML
NPPGSYCAYASVYLTVCLIRIFGLATKTYLEQQLHVGIIQDYIDNLVAIA
AKTASSSASELKKGRGQPSPSLAPSLTAGTSATTSTTTASAAAAERCAAD
NAADPNAANSLSEPSPANASLLLAARAAVAGTSAFGDACGRGDTRDRSPK
ATEGGGSGGGARDSRGAGNGNEGEALLQPAQEAMRRMIVHIDTLDPYPCV
LGIPVKPALFATSKVYVFGCFAVISVKLMYDVISGVV*
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