prot_E-siliculosus-1a_F_contig1136.897.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1136.897.1
Unique Nameprot_E-siliculosus-1a_F_contig1136.897.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length198
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: D8LDP8_ECTSI (ARC5, dynamin-related protein involved in plastid division n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP8_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 2.360e-111
Identity = 185/192 (96.35%), Postives = 185/192 (96.35%), Query Frame = 0
Query:    1 MVWSAAPAPSNYSSHGSRRRPRCRIGLWDLVTTALSVATCKVSGAVSANANEPSVGVGGWVRPGGWGAVEQLRGGAAEXXXXXXXXXRKQADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQA 192
            M WSAAPA SN SSHGSRRRPRCRIGLW LV TALSVATCK SGAVSANAN PSVGVGGWVRPGGWGAVEQLRGGAAEXXXXXXXXXRKQADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQA
Sbjct:    1 MAWSAAPALSNGSSHGSRRRPRCRIGLWALVATALSVATCKTSGAVSANANVPSVGVGGWVRPGGWGAVEQLRGGAAEXXXXXXXXXRKQADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQA 192          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A835YPI8_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI8_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.260e-54
Identity = 99/126 (78.57%), Postives = 105/126 (83.33%), Query Frame = 0
Query:   67 GAVEQLRGGAAEXXXXXXXXXRKQADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQA 192
            GA E+LRGGAA           +   K   RE LY+AYNMLH+LAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYL LE+G+EEPRSL EIQA
Sbjct:   57 GAAERLRGGAALPQEPP-----EAVGKQEHREQLYEAYNMLHSLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLTLENGREEPRSLSEIQA 177          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A835Z9B7_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.200e-52
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 0
Query:   91 ADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQA 192
            A K  QRE LY+AYNMLH+LAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYL LE+G+EEPRSL EIQA
Sbjct:   69 AAKQEQREQLYEAYNMLHSLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLTLENGREEPRSLAEIQA 170          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A7S2PD63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD63_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.970e-45
Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 0
Query:   90 QADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQ 191
            Q     ++  LYDAYN+LH+LAQDF KPFD+PAV+VVGHQ+SGKSALIEALMGFQFNQVGGGTKTRRP+ALRMQYNP C  PRC+L  +DG E P+SL EIQ
Sbjct:   23 QQTSSTEKGALYDAYNLLHSLAQDFQKPFDAPAVVVVGHQSSGKSALIEALMGFQFNQVGGGTKTRRPVALRMQYNPRCAHPRCFLQGDDGIERPKSLTEIQ 124          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: K0S7D2_THAOC (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7D2_THAOC)

HSP 1 Score: 158 bits (400), Expect = 2.960e-45
Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 0
Query:   91 ADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQ 191
            A   +++  LYDAYN+LH+LAQDF KPFD+PAV+VVGHQ+SGKSALIEALMGFQFNQVGGGTKTRRP+ALRMQYNP C  PRC+L  +DG E P SL EIQ
Sbjct:   67 AGTSSEKGALYDAYNLLHSLAQDFQKPFDAPAVVVVGHQSSGKSALIEALMGFQFNQVGGGTKTRRPVALRMQYNPRCSSPRCFLQGDDGVERPMSLVEIQ 167          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A7S3UW64_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW64_HETAK)

HSP 1 Score: 166 bits (421), Expect = 3.260e-44
Identity = 77/97 (79.38%), Postives = 90/97 (92.78%), Query Frame = 0
Query:   96 QRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQA 192
            Q+E LYDAYN+LH+LAQDF KPFDSPAV+VVGHQTSGKSALIEALMGFQFNQVGGGTKTRRP+AL+MQ+NPDC QPRCYL  ++G+EE  +L++IQA
Sbjct:   56 QKEALYDAYNLLHSLAQDFKKPFDSPAVVVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPVALKMQFNPDCTQPRCYLTRDNGREELMTLRDIQA 152          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A4D9DCK2_9STRA (Dynamin-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCK2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.800e-43
Identity = 80/118 (67.80%), Postives = 95/118 (80.51%), Query Frame = 0
Query:   74 GGAAEXXXXXXXXXRKQADKHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQ 191
            GGAA+           +A++  Q+E LY+AYN+LH+LAQDF KPFD+ A+L+VG QT GKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNP C QP C+L L++GKEE RSL+EIQ
Sbjct:  105 GGAAKPFHRASGNSGGKANRKRQKEQLYEAYNLLHSLAQDFQKPFDATAILIVGQQTGGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPRCSQPHCFLTLDNGKEEARSLKEIQ 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A7S2R4H5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4H5_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.580e-42
Identity = 76/99 (76.77%), Postives = 87/99 (87.88%), Query Frame = 0
Query:   93 KHAQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQ 191
            K +++  LYDAYN+LHTLAQDF KPFD+PAV+VVGHQ+SGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNP C +P C+L  +DG E P+SL EIQ
Sbjct:  170 KGSEKGALYDAYNLLHTLAQDFRKPFDAPAVVVVGHQSSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPRCSEPNCFLQGDDGTERPKSLAEIQ 268          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: A0A7S2UD37_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD37_9STRA)

HSP 1 Score: 160 bits (405), Expect = 5.440e-42
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 0
Query:   95 AQRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQ 191
            +++  LYDAYN+LHTLAQDF KPFD+PAV+VVGHQ+SGKSALIEALMGFQFNQVGGGTKTRRP+ALRMQYNP C  P+C+L  EDG E P++L EIQ
Sbjct:  162 SEKGALYDAYNLLHTLAQDFQKPFDAPAVVVVGHQSSGKSALIEALMGFQFNQVGGGTKTRRPVALRMQYNPKCSHPKCFLQGEDGIERPKTLSEIQ 258          
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Match: B8C5C4_THAPS (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5C4_THAPS)

HSP 1 Score: 159 bits (401), Expect = 9.430e-42
Identity = 74/96 (77.08%), Postives = 85/96 (88.54%), Query Frame = 0
Query:   96 QRETLYDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQ 191
            ++  LYDAYN+LH+LAQDF KPFD+PAV+VVGHQ+SGKSALIEALMGFQFNQVGGGTKTRRP+ALRMQYNP C  PRC+L  +DG E P+SL EIQ
Sbjct:    1 EKGALYDAYNLLHSLAQDFQKPFDAPAVVVVGHQSSGKSALIEALMGFQFNQVGGGTKTRRPVALRMQYNPRCSHPRCFLQGDDGIERPKSLTEIQ 96          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1136.897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDP8_ECTSI2.360e-11196.35ARC5, dynamin-related protein involved in plastid ... [more]
A0A835YPI8_9STRA2.260e-5478.57Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A835Z9B7_9STRA1.200e-5290.20Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A7S2PD63_9STRA1.970e-4573.53Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
K0S7D2_THAOC2.960e-4574.26Dynamin-type G domain-containing protein (Fragment... [more]
A0A7S3UW64_HETAK3.260e-4479.38Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A4D9DCK2_9STRA1.800e-4367.80Dynamin-type G domain-containing protein n=2 Tax=M... [more]
A0A7S2R4H5_9STRA1.580e-4276.77Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2UD37_9STRA5.440e-4276.29Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C5C4_THAPS9.430e-4277.08Dynamin-type G domain-containing protein (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022812Dynamin superfamilyPRINTSPR00195DYNAMINcoord: 120..138
score: 51.66
coord: 145..162
score: 40.14
IPR022812Dynamin superfamilyPFAMPF00350Dynamin_Ncoord: 123..191
e-value: 3.5E-12
score: 46.7
IPR022812Dynamin superfamilyPANTHERPTHR11566DYNAMINcoord: 98..192
NoneNo IPR availableGENE3D3.40.50.300coord: 98..195
e-value: 9.3E-21
score: 76.2
NoneNo IPR availablePANTHERPTHR11566:SF78DYNAMIN-LIKE PROTEIN Bcoord: 98..192
IPR030381Dynamin-type guanine nucleotide-binding (G) domainPROSITEPS51718G_DYNAMIN_2coord: 117..197
score: 22.652
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 98..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1136contigE-siliculosus-1a_F_contig1136:7398..11299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1136.897.1mRNA_E-siliculosus-1a_F_contig1136.897.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1136 7398..11299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1136.897.1 ID=prot_E-siliculosus-1a_F_contig1136.897.1|Name=mRNA_E-siliculosus-1a_F_contig1136.897.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=198bp
MVWSAAPAPSNYSSHGSRRRPRCRIGLWDLVTTALSVATCKVSGAVSANA
NEPSVGVGGWVRPGGWGAVEQLRGGAAEGGGGRSSSRRKQADKHAQRETL
YDAYNMLHTLAQDFHKPFDSPAVLVVGHQTSGKSALIEALMGFQFNQVGG
GTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQARRFQW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030381G_DYNAMIN_dom
IPR022812Dynamin_SF