prot_E-siliculosus-1a_F_contig1132.878.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1132.878.1
Unique Nameprot_E-siliculosus-1a_F_contig1132.878.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length155
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 2.010e-101
Identity = 147/154 (95.45%), Postives = 148/154 (96.10%), Query Frame = 0
Query:    1 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARSDSSGELPPAQEEGGADAGLRAEGGRQSS 154
            MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLY GKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQG KAKRKIEEALAAR DSSGEL   +EEGGADAGLRAEGGRQSS
Sbjct:    1 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHAGEEEGGADAGLRAEGGRQSS 154          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.060e-39
Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 0
Query:   28 SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARSDS 128
            S RS+ G+Y GKDI FGN ISFSH+K RRT+KPN Q+K L+SETL  W++FNLTTHALRC+DRAGGID YLLKTPD  L S+ G  A+R IE A A+R  S
Sbjct:   60 SNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASRDPS 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.220e-35
Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 0
Query:   28 SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALA 123
            S R+  GLY GKD+GFGN +S S +K RR WKPNVQKK L+SE+L +W+KFN+TT A+RCVD+AGG+D YLL   D  + S+QG  AKR+IE ALA
Sbjct:   42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALA 137          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.950e-33
Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 0
Query:   28 SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARSDSSGELPPAQEEGGADAGLRAEGGRQSS 154
            S R+  GL+  KDI FGN +S S +K RR+WKPN Q K L+SETL+E++KF  TT+ L+C+D+ GG+D YLL+TPD+ LNS+ G  AKR+IEE L  R    G      E+  + A    EGGR SS
Sbjct:   18 SGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIEEVLQQRQTLEGR---GLEDASSTAASSNEGGRISS 141          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.960e-32
Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 0
Query:   28 SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARS 126
            S R+  GL+ GKD+ FGN +S S +K RR WKPNVQ+K L+SETL ++++FN+T HA+RCVD+AGG+D YLL  PD+ L S QG  AK KI E L A++
Sbjct:   16 SGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKLQAKN 114          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: F0WX23_9STRA (Uncharacterized protein AlNc14C340G10780 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX23_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.260e-29
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 0
Query:   11 CLQTLARGCKNPKKPQH-SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARSDSSGE 131
            C++ L    +  KK +H S R++ GL+ G+D GFGN +S S ++ RR+WK N Q K LYSE LDE I  N+TTH LRC+D+ GG+D YL    DE    V+G KAK +I EAL A++++  E
Sbjct:    9 CMRFLQAFTRGSKKHEHISGRARRGLFAGRDKGFGNNVSHSKRRTRRSWKVNHQWKHLYSEALDEMIGLNVTTHTLRCIDKIGGLDNYLQSISDEQELGVKGLKAKNRIVEALKAQTENDTE 130          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: G4YF32_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YF32_PHYSP)

HSP 1 Score: 111 bits (277), Expect = 1.520e-28
Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = 0
Query:    7 NTVGCLQTLARGCKNPKKPQH-SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAA 124
            N++  L+   R  K+    QH S R+Q GL+ G+D  FGN +SFS ++ RR WK N Q K LYSE LDE +  N+TTH LRCVD+ GG+D YLL   DE    V+G K + ++ EALAA
Sbjct:    4 NSMRFLEAFTRAAKH----QHVSGRAQRGLFAGRDKAFGNNVSFSKRRTRRAWKVNHQWKTLYSEALDEKVGLNVTTHTLRCVDKCGGLDNYLLSIKDERELGVKGLKTRDRVREALAA 118          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.340e-28
Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = 0
Query:   24 KPQHSKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKI 118
            K   S R++ GLY  KD+  GN++SFS +K RR WKPNVQ K  +S+ L  W++F +TTHA++C+D+ GGIDKY+L+TP+  LNS+ G  AKR +
Sbjct:   33 KRHGSNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKRML 127          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: I2CRI6_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRI6_NANGC)

HSP 1 Score: 110 bits (276), Expect = 3.200e-28
Identity = 61/119 (51.26%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   28 SKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARSDSSGELPPAQEEGGADAGLR 146
            S R++ GLY GKD+ FGN +S S++K RR +KPN   K L+S+TL + I F LTT  LR VD+ GG+D YLL+TPD  L+S  G K KR+IE  + ARSD+  E P A   GG   G R
Sbjct:   25 SNRARRGLYAGKDVLFGNKVSHSNRKTRRMFKPNAHHKRLWSDTLQDMIPFYLTTTTLRMVDKVGGLDNYLLQTPDHKLDSESGIKVKRRIEN-IKARSDTI-EKPTAASSGGEAGGRR 141          
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Match: A0A835YSL8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.150e-28
Identity = 66/146 (45.21%), Postives = 83/146 (56.85%), Query Frame = 0
Query:    4 LRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYVGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGCKAKRKIEEALAARSDSSGELPPAQEEGGADAGLRAEG 149
            +R++ V  L+   R    P    +S RSQ G+Y GKD+ FGN   FS KK+RR W PNVQ K L+SE L E I   +TT ALR VD+AGG+D YLL T D+ L S Q      ++ EA+    D   E     E  GADAGL  +G
Sbjct:    5 VRQSAVKFLEGFTRASSKPNL--YSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDEGGREGEGEGADAGLHVQG 148          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1132.878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS33_9PHAE2.010e-10195.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZX50_9STRA1.060e-3966.34Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2C450_9STRA4.220e-3561.46Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RZD4_9STRA1.950e-3350.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2HHC9_9STRA5.960e-3256.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0WX23_9STRA3.260e-2947.54Uncharacterized protein AlNc14C340G10780 n=1 Tax=A... [more]
G4YF32_PHYSP1.520e-2848.74Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A7S3K4M7_9STRA2.340e-2851.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
I2CRI6_NANGC3.200e-2851.26Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A835YSL8_9STRA6.150e-2845.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037147Ribosomal protein L28/L24 superfamilyGENE3D2.30.170.40coord: 16..128
e-value: 1.3E-36
score: 127.4
IPR026569Ribosomal protein L28/L24PFAMPF00830Ribosomal_L28coord: 36..90
e-value: 5.5E-20
score: 71.3
IPR026569Ribosomal protein L28/L24PANTHERPTHR1352839S RIBOSOMAL PROTEIN L28, MITOCHONDRIALcoord: 18..127
IPR001383Ribosomal protein L28HAMAPMF_00373Ribosomal_L28coord: 30..97
score: 13.547
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 31..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1132contigE-siliculosus-1a_F_contig1132:31153..33650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1132.878.1mRNA_E-siliculosus-1a_F_contig1132.878.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1132 31069..34478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1132.878.1 ID=prot_E-siliculosus-1a_F_contig1132.878.1|Name=mRNA_E-siliculosus-1a_F_contig1132.878.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=155bp
MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYVGKDIGFGNTISFS
HKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLK
TPDEWLNSVQGCKAKRKIEEALAARSDSSGELPPAQEEGGADAGLRAEGG
RQSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034704L28p-like
IPR001383Ribosomal_L28
IPR026569Ribo_L28/L24
IPR037147Ribo_L28/L24_sf