prot_E-siliculosus-1a_F_contig1131.870.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1131.870.1
Unique Name	prot_E-siliculosus-1a_F_contig1131.870.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	530

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: D7FXF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXF1_ECTSI)

HSP 1 Score: 858 bits (2216), Expect = 4.540e-311
Identity = 522/530 (98.49%), Postives = 522/530 (98.49%), Query Frame = 0

Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEGGXXXXAAGEAGGADAGEGSKAXXXXXXGAEKKAEAAPYQPVPLXXXXXXXXXXXXXXXXXXXXXXQLQGYQPPXXXXXXXXXXXX-VASAGRGQYAPPPGPRLPTYNXXXXXXXXXXXTRGPPIPSYGPVRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXYYASMDPHRLGAQPARPLLPTPPPAAGPGVASKSS 529
            MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEG XXXXAAGEAGGADAGEGSKAXXXXXXGAEKKAEAAPYQPV L   XXXXXXXXXXXXXXXXXXXQLQGYQPPXXXXXXXXXXXX VA AGRGQYAPPPGPRLPTYNXXXXXXXXXXXTRGPPIPSYGPVRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXYYASMDPHRLGAQPARPLLPTPPPAA PGVASKSS
Sbjct:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEGXXXXXAAGEAGGADAGEGSKAXXXXXXGAEKKAEAAPYQPVSLPPVXXXXXXXXXXXXXXXXXXXQLQGYQPPXXXXXXXXXXXXAVAPAGRGQYAPPPGPRLPTYNXXXXXXXXXXXTRGPPIPSYGPVRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXYYASMDPHRLGAQPARPLLPTPPPAAAPGVASKSS 530

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: A0A6H5K028_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K028_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 4.530e-176
Identity = 326/385 (84.68%), Postives = 327/385 (84.94%), Query Frame = 0

Query:  145 LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEGGXXXXAAGEAGGADAGEGSKAXXXXXXGAEKKAEAAPYQPVPLXXXXXXXXXXXXXXXXXXXXXXQLQGYQPPXXXXXXXXXXXXVASAGRGQYAPPPGPRLPTYNXXXXXXXXXXXTRGPPIPSYGPVRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXYYASMDPHRLGAQPARPLLPTPPPAAGPGVASKSS 529
            LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKE  XXXX                XXXXX  AEKKAE APYQPVPL XXXXXXXXXXXXXXXXXXXXXQLQGY+PP            VA AGRGQYAPPPGPRLPTYN           TRGPPIPSYGPVRG   XXXXXXX       XXXXXXXXXXXXXYYASMDPHRLGAQP RPLLPTPPPAA PGVASKSS
Sbjct:    3 LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEKKAEVAPYQPVPLPXXXXXXXXXXXXXXXXXXXXXQLQGYRPPPPSAYPQQQQPAVAPAGRGQYAPPPGPRLPTYNNNGVSAGQHHHTRGPPIPSYGPVRGGXXXXXXXXXRRGPPPGXXXXXXXXXXXXXYYASMDPHRLGAQPTRPLLPTPPPAAAPGVASKSS 387

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: A0A7S3YHN5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHN5_HETAK)

HSP 1 Score: 421 bits (1081), Expect = 9.380e-142
Identity = 200/321 (62.31%), Postives = 244/321 (76.01%), Query Frame = 0

Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGG-NPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGN--MADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEES---GTSGFNGP 315
            MGERG+++K   NK+ WEE++FP+VCETCLGDNPYVRMTKE  GK+CKICERPYT FRW+ GT  R KSTQLCQTC+KLKN CQ CVLDLQYGLPVEVRDK+LA ED++ VP SDANRE+    H   +  GG   Y   P NQ LLR+AR+ PYY+RN PHKCSFYAKGEC RG +CPFLHEMPTD  DPLA+QN RDR+YG+DDPVAAK++ R D++P L  PED  + SL++G   M   +T +DL+D FY FGEL SIR+VP +  AFV++T R AAE AA+ +Y CL +KG  L+L+WA+R +E    G +G  GP
Sbjct:    1 MGERGFRIKTDINKEGWEEAEFPVVCETCLGDNPYVRMTKERFGKSCKICERPYTAFRWRPGTGARFKSTQLCQTCSKLKNVCQVCVLDLQYGLPVEVRDKYLAVEDQVVVPESDANREWFAGQHNAMVEAGGAGGYGAAPRNQTLLRLARNKPYYRRNLPHKCSFYAKGECTRGDRCPFLHEMPTDPNDPLANQNTRDRYYGKDDPVAAKLLKRIDEMPALRTPEDPSVKSLYVGRLPMDGSVTQDDLKDVFYQFGELESIRVVPRQSCAFVEYTLRDAAERAAQTMYNCLYVKGHRLQLSWASRRKEDALGGAAGGGGP 321

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: A0A835YZV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZV2_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 9.140e-133
Identity = 187/308 (60.71%), Postives = 230/308 (74.68%), Query Frame = 0

Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLE---VPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSE 305
            MGERG QLK   NK  WEE+DFP+ CETCLGDNPYVRMTKEP GKACKICERP+  FRWK GT  R KSTQ+CQTCAK+KN CQ C+LDLQYGLPV+VRD+ LAE +  +   +P SD N ++M Q   +  A GG+ Y     NQKLLRMAR+ PYY+RN  HKCSF+AKGEC RG +CPF H MPTDR+DP+AHQN+RDRFYG+DDPVA K++ +  D P+L PP D  IS+LW+G +   I  +DLRDA Y++GE+ ++R++  K  AFV++TTR AAE AA  LY+ L I G  LR++WA R E
Sbjct:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRRE 308

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: K8YS72_NANGC (Pre-mRNA-splicing factor RBM22/SLT11 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YS72_NANGC)

HSP 1 Score: 387 bits (993), Expect = 8.950e-127
Identity = 185/325 (56.92%), Postives = 236/325 (72.62%), Query Frame = 0

Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDR----------LEVPGSDANREFMTQVHEKQLAEG-GNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMAR-----QDDLPKLEPPEDEGISSLWLGNM-ADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESG 308
            MGERG Q+K   NK+ WE SDFP+VCETCLGDNPYVRMTKEP GKACKIC+RP+T+FRW+ G   R K T++CQTCAK+KN CQTCVLDL YGLPV+VRD  LAE             + VP SD N+++    H++ +AEG  + Y    +N+KL+R++R+ PYYKRN PHKC+FYAKGEC RG +CPFLHEMPT R+DPLA+QNI+DRFYGQDDPVA KM+ R     ++D   L PP D  I +L +G M    +T  ++R+AFY FGE+  +R+VP K  AFV++TTR+AAEAAA+ L+  L ++G  LR++WA R   SG
Sbjct:    1 MGERGMQIKADLNKEGWESSDFPLVCETCLGDNPYVRMTKEPAGKACKICDRPFTIFRWRPGAKARFKKTEVCQTCAKMKNVCQTCVLDLTYGLPVQVRDSVLAEAAAAGEGGAASYAMTVPQSDTNKQWFAGQHDRMVAEGHADSYGKAQINEKLMRLSRAQPYYKRNLPHKCTFYAKGECTRGDRCPFLHEMPTSRSDPLANQNIKDRFYGQDDPVAQKMLGRAASKEKEDQAPLIPPTDPEIKTLMVGGMEGGAVTETEMREAFYGFGEVAGVRMVPAKHLAFVEYTTREAAEAAAKALHNNLTLQGLRLRVSWALRQAGSG 325

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: A0A7J7K4C1_BUGNE (Pre-mRNA-splicing factor RBM22 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K4C1_BUGNE)

HSP 1 Score: 362 bits (930), Expect = 1.170e-117
Identity = 173/305 (56.72%), Postives = 224/305 (73.44%), Query Frame = 0

Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYS---NKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESG 308
            K AN  N++ WEE+DFPI+C+TCLGDNPYVRMTKE  GK CKIC RP+TVFRW  G   R K T++CQTCAKLKN CQTC+LDL+YGLPV+VRD+ L   D  E+P SD N+E+     EKQLAE G   S   ++  +  LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ H+ PTD  DPLA QNI+DRFYGQ+DPVA K++ R   +PK+ PPED+ I++L++GN++D IT +D+ D FY +GELRS+ IV G   AFVQFT R AAEAAA++ +  L+I G+ + + W     + G
Sbjct:    5 KSANTYNRQGWEEADFPILCQTCLGDNPYVRMTKEKFGKECKICARPFTVFRWCPGARMRYKKTEVCQTCAKLKNVCQTCLLDLEYGLPVQVRDQALKMRD--EMPKSDVNKEYYIANAEKQLAEDGPSGSLGKSQAPSDILLKLARNTPYYKRNRPHICSFWVKGECKRGEECPYRHDRPTDPDDPLADQNIKDRFYGQNDPVANKLLDRYSQMPKISPPEDKSITTLYVGNVSDDITEKDISDNFYQYGELRSVNIVKGSQCAFVQFTQRSAAEAAADKAFNKLIINGKRMNIKWGKSQAQQG 307

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: A0A1S3HN76_LINUN (Pre-mRNA-splicing factor RBM22 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HN76_LINUN)

HSP 1 Score: 356 bits (913), Expect = 5.130e-116
Identity = 168/300 (56.00%), Postives = 220/300 (73.33%), Query Frame = 0

Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQK------LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNW 300
            K AN  N++ WEE+DFPI+C+TCLGDNPY+RMTKE +GK CKIC RP+TVFRW  G   R K T++CQTC+KLKN CQTC+LDL+YGLPV+VRD  L  +D +  P SD N+EF  Q  E+ LA   +  +   L +       LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ HE PTD  DPLA QNI+DRFYG +DPVA K++ R   +PKLEPPED+ +++L++GN+ D +T +DLRD FY FGE+RS+ +V  +  AFVQFT R+++EAAAE  +  L+I GR L + W
Sbjct:    5 KSANTYNRQNWEEADFPILCQTCLGDNPYIRMTKEKYGKECKICVRPFTVFRWCPGKGARFKKTEVCQTCSKLKNICQTCLLDLEYGLPVQVRDAALKLQDSM--PKSDVNKEFFAQNAERDLANSDSSLAYGALGKSQSPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFYGVNDPVADKLIKRYATMPKLEPPEDKSVTTLYVGNLGDKVTEKDLRDHFYQFGEIRSVTMVSRQQCAFVQFTKRESSEAAAESTFNKLIINGRRLTIKW 302

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: V4B970_LOTGI (Pre-mRNA-splicing factor RBM22 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B970_LOTGI)

HSP 1 Score: 355 bits (910), Expect = 1.310e-115
Identity = 165/299 (55.18%), Postives = 227/299 (75.92%), Query Frame = 0

Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQL--AEGGNPY---SNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNW 300
            KGAN  N++ WEES+FP++C+TCLGDNPYVRM KE HGK CK C RP+TVFRW  G   R K T++CQTC+++KN CQTC+LDL+YGLPV+VRD  L  +D L  P SD N+EF  Q  E+++  ++G NP    +NK  +  LL++AR++PYYKRN+PH CSF+ KGEC RG +CP+ H+ PTD  DPLA+QNI+DRFYG +DPVA K++ R  D+PKLEPPEDE +++L++G +++ I  +DL++ FY FGE+RS+ +V  +  AFVQFT+R +AEAAAE+ +  L++KG+ L + W
Sbjct:    5 KGANTYNRQNWEESEFPLLCQTCLGDNPYVRMMKEKHGKECKTCNRPFTVFRWCPGARMRFKKTEVCQTCSQMKNICQTCLLDLEYGLPVQVRDAALRVQDSL--PKSDVNKEFYMQNVEREIENSDGTNPVGAIANKVPSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECPYRHDKPTDPDDPLANQNIKDRFYGTNDPVADKLLRRYQDMPKLEPPEDETVTTLYVGGLSEAIEVDDLKNHFYQFGEIRSVNVVQKQQCAFVQFTSRTSAEAAAEKSFNKLILKGQRLSIKW 301

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: UPI001EE57BAF (pre-mRNA-splicing factor RBM22-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE57BAF)

HSP 1 Score: 357 bits (916), Expect = 2.920e-115
Identity = 167/301 (55.48%), Postives = 224/301 (74.42%), Query Frame = 0

Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLA--EGGNPYSN-----KPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNW 300
            KGAN  N++ WE+++FPI+C+TCLGDNPY+RMTKE +GK CKIC RP+TVFRW  G   R K T++CQTC+K+KN CQTC+LDL+YGLPV+VRD  L   D +  P SD N+E+ TQ  E+++A  +G +P        +  +  LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ HE PTD  DPLA QNI+DRFYG +DPVA K+M R  ++PKLEPPED+ I++L++GN+ D +T +DLRD FY FGE+RS+ +V  +  AFVQFT R ++E AAE+ +  L+I GR L + W
Sbjct:    5 KGANTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPGARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKAYDNM--PKSDVNKEYYTQNMEREIANSDGTSPVGALAGKAQAASDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYSNMPKLEPPEDKTITTLYVGNLGDKVTEQDLRDHFYQFGEIRSVNVVSKQQCAFVQFTERPSSETAAERSFNKLIINGRRLNIKW 303

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BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Match: C3XZZ5_BRAFL (Pre-mRNA-splicing factor RBM22 (Fragment) n=4 Tax=Branchiostoma TaxID=7737 RepID=C3XZZ5_BRAFL)

HSP 1 Score: 356 bits (913), Expect = 6.380e-115
Identity = 171/307 (55.70%), Postives = 226/307 (73.62%), Query Frame = 0

Query:   10 GAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQK------LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESG 308
            GAN  N++ WE+S+FPI+C+TCLGDNPY+RMTKE  GK CKIC+RP+TVFRW  G   R K T++CQTC+KLKN CQTC+LDL+YGLPVEVRD+ L  +D  +VP SD N+E+ TQ  E+++A      +   L +       LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ HE PTD  DPLA QNI+DR+YG +DPVA K++ R D++P L+PPED  I++L++G + D IT +DLRD FY FGE+RSI +V  +  AF+QFT+R AAE AAE+ +  L+I GR L + W  RS+  G
Sbjct:    6 GANTYNRQNWEDSEFPILCQTCLGDNPYIRMTKEKFGKECKICQRPFTVFRWCPGARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPVEVRDRALQLKD--DVPKSDVNKEYYTQNMEREIANTDGSKAVGTLGKAQAPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGVNDPVANKLLKRYDNMPSLKPPEDRSITTLYIGGLGDKITEQDLRDHFYQFGEIRSITMVARQQCAFIQFTSRPAAEMAAERTFNKLIINGRRLSVRWG-RSQAQG 309

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1131.870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXF1_ECTSI	4.540e-311	98.49	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5K028_9PHAE	4.530e-176	84.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3YHN5_HETAK	9.380e-142	62.31	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A835YZV2_9STRA	9.140e-133	60.71	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
K8YS72_NANGC	8.950e-127	56.92	Pre-mRNA-splicing factor RBM22/SLT11 n=3 Tax=Monod...	[more]
A0A7J7K4C1_BUGNE	1.170e-117	56.72	Pre-mRNA-splicing factor RBM22 n=1 Tax=Bugula neri...	[more]
A0A1S3HN76_LINUN	5.130e-116	56.00	Pre-mRNA-splicing factor RBM22 n=1 Tax=Lingula ung...	[more]
V4B970_LOTGI	1.310e-115	55.18	Pre-mRNA-splicing factor RBM22 n=1 Tax=Lottia giga...	[more]
UPI001EE57BAF	2.920e-115	55.48	pre-mRNA-splicing factor RBM22-like n=2 Tax=Haliot...	[more]
C3XZZ5_BRAFL	6.380e-115	55.70	Pre-mRNA-splicing factor RBM22 (Fragment) n=4 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 231..299 e-value: 2.4E-16 score: 70.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 232..296 e-value: 4.1E-12 score: 45.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 230..303 score: 15.085
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 157..183 e-value: 5.8E-5 score: 32.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 156..184 score: 13.77
None	No IPR available	GENE3D	4.10.1000.10		coord: 148..200 e-value: 6.5E-6 score: 27.9
None	No IPR available	PANTHER	PTHR14089:SF6	PRE-MRNA-SPLICING FACTOR RBM22	coord: 9..507
IPR032297	Torus domain	PFAM	PF16131	Torus	coord: 156..191 e-value: 1.1E-6 score: 29.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 211..310 e-value: 5.1E-17 score: 63.8
IPR039171	Pre-mRNA-splicing factor Cwc2/Slt11	PANTHER	PTHR14089	CELL CYCLE CONTROL PROTEIN	coord: 9..507
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 161..182
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 223..328

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1131	contig	E-siliculosus-1a_F_contig1131:27569..33157 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1131.870.1	mRNA_E-siliculosus-1a_F_contig1131.870.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1131 27404..33947 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1131.870.1 ID=prot_E-siliculosus-1a_F_contig1131.870.1|Name=mRNA_E-siliculosus-1a_F_contig1131.870.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=530bp
MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKIC
ERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRD
KFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMAR
STPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRF
YGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAF
YSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNW
ATRSEESGTSGFNGPEGGGRRRIESGSSKAKEGGQQQQAAGEAGGADAGE
GSKAGGAAGAGAEKKAEAAPYQPVPLPPVPGLPPGAPVAPVPHMPPMPQL
QGYQPPPPSAYPQQQQPAVASAGRGQYAPPPGPRLPTYNNNGAAAGQHHH
TRGPPIPSYGPVRGSGGGSYGGGGRRGPPPGPPPGPPPGPPPAPYYASMD
PHRLGAQPARPLLPTPPPAAGPGVASKSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR036855	Znf_CCCH_sf
IPR039171	Cwc2/Slt11
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR032297	Torus
IPR000571	Znf_CCCH
IPR000504	RRM_dom