prot_E-siliculosus-1a_F_contig1129.854.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1129.854.1
Unique Nameprot_E-siliculosus-1a_F_contig1129.854.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length186
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: D8LKM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM1_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.480e-60
Identity = 138/164 (84.15%), Postives = 138/164 (84.15%), Query Frame = 0
Query:    1 MSESGAERSSRLKALKEKANKSIKFRNYRPQDATIRQQALDSSKAGEPTSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSSGE 164
            MSESGAER SRLKALKEKANKSIKFRNYRPQDA IRQQALDSSKAGEPTSGS                     XXXXXXXXXXXXXXXXXX  ESSLIQQELKKQKETQDE ELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSSGE
Sbjct:    1 MSESGAERRSRLKALKEKANKSIKFRNYRPQDAAIRQQALDSSKAGEPTSGSGSGGANKGEGAASPSGKSMGGXXXXXXXXXXXXXXXXXXAPESSLIQQELKKQKETQDEGELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSSGE 164          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A835ZFC6_9STRA (Cwf18 pre-mRNA splicing factor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.630e-16
Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 0
Query:   94 ESSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANAS 160
            + S+I+QEL+K K+ QDE  LNIAP+K +WDLKRD   KLEKL+RRTQRAIV+I+RE+MAEEAA  S
Sbjct:   84 QESIIKQELRKVKDGQDEGTLNIAPRKPDWDLKRDAAPKLEKLNRRTQRAIVQILREKMAEEAAQGS 150          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A8H7BMD5_9FUNG (Coiled-coil domain-containing protein 12 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BMD5_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 1.620e-11
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0
Query:  106 KETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASS 161
            KE ++ +  N+APKK NWDLKRDVEKKLEKLDRRT+RAI+EIIRER+  E  + +S
Sbjct:   77 KEKEEVDLFNLAPKKPNWDLKRDVEKKLEKLDRRTKRAILEIIRERLMSENGDKTS 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A1X2IBU1_9FUNG (mRNA splicing factor n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBU1_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 2.520e-11
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  105 QKETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAAN 158
            +KE +D +  N+APKKANWDL+RDVEKKLEKLDRRTQ+AI+E IR+R+  E  +
Sbjct:   82 EKEKEDVDLFNLAPKKANWDLRRDVEKKLEKLDRRTQKAILETIRQRLTNEGGS 135          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A1X2GN64_9FUNG (mRNA splicing factor n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GN64_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 2.580e-11
Identity = 34/49 (69.39%), Postives = 45/49 (91.84%), Query Frame = 0
Query:  106 KETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAE 154
            KET + +  N+APKKANWDL+RDVEKK++KLDRRTQRAI++IIR+R+A+
Sbjct:   84 KETDEVDLFNLAPKKANWDLRRDVEKKMQKLDRRTQRAILDIIRQRLAQ 132          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: K8Z0J6_NANGC (Coiled-coil domain-containing protein 12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z0J6_NANGC)

HSP 1 Score: 68.6 bits (166), Expect = 2.800e-11
Identity = 51/146 (34.93%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   19 ANKSIKFRNYRPQDAT-IRQQALDSSKAGEPTSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSLIQQELKKQK-ETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSS 162
            + K +KFRNYRP DA+ +      S+ +G   +G+                                         E   IQ+ELK+ + E     +L +AP+KANWDLKRDV KKL KL+R TQ+AI+EI++E++A+EA   S+S
Sbjct:    5 SKKPLKFRNYRPADASLVSLSTATSTGSGLVPTGAKSVEDSAAGVPRPNEVRPPPAHAENNQGEEQPKKAEDVKKDEEDAIQRELKRHEAEHGSGGQLKVAPRKANWDLKRDVAKKLAKLNRLTQKAIIEILQEKLAQEAEEGSTS 150          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A7S2W1E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1E1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.620e-11
Identity = 54/155 (34.84%), Postives = 75/155 (48.39%), Query Frame = 0
Query:    3 ESGAERSSRLKALKEKANKSIKFRNYRPQDATIRQQALDSSKAGEPTSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSLIQQELKKQKETQDEEE-LNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEA 156
            ES   R  RL+ +       +KFRNYRPQD  ++ +A+ ++                                                   +++IQQELK+    Q  EE LNIAP+K NWDLKRDV KK+EKL++RTQ AIV++I+ER+  EA
Sbjct:    8 ESAEARRKRLRTMAAGGASKLKFRNYRPQDTDLKTKAVAAA------------------------LPKPILDEVQAQPAPDKDASSVQSRKATAVIQQELKEHVAEQGGEEVLNIAPRKPNWDLKRDVAKKMEKLNKRTQLAIVDLIKERIEREA 138          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: S2JYD1_MUCC1 (Uncharacterized protein n=5 Tax=Mucor TaxID=4830 RepID=S2JYD1_MUCC1)

HSP 1 Score: 66.6 bits (161), Expect = 1.400e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0
Query:  100 QELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERM--------AEEAANASSS 162
            Q  +KQKE  D    N+APKK NWDLKRDVEKKLE+LDRRTQRAI EIIR+R+        AE+ ANA ++
Sbjct:   79 QAAEKQKEEVDL--FNLAPKKPNWDLKRDVEKKLERLDRRTQRAIYEIIRQRLEGDKDATLAEKVANAEAT 147          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A250XHF4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XHF4_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 2.060e-10
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0
Query:  103 KKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIR----ERMAEE 155
            KK++  Q++  +N+APKKANWDLKRDVEKKLEKL+RRTQRAI+EI++    ERM EE
Sbjct:   70 KKEEVLQEDVLVNVAPKKANWDLKRDVEKKLEKLERRTQRAILEIMQAEEAERMREE 126          
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Match: A0A8H7VG57_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VG57_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 2.140e-10
Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 0
Query:  114 LNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEE 155
            +N+ PKK NWDLKRDVEKKLEKLDRRTQRAI+EIIR+R++ E
Sbjct:   81 INLQPKKPNWDLKRDVEKKLEKLDRRTQRAILEIIRQRLSGE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1129.854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM1_ECTSI1.480e-6084.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFC6_9STRA7.630e-1667.16Cwf18 pre-mRNA splicing factor-domain-containing p... [more]
A0A8H7BMD5_9FUNG1.620e-1166.07Coiled-coil domain-containing protein 12 n=1 Tax=A... [more]
A0A1X2IBU1_9FUNG2.520e-1164.81mRNA splicing factor n=1 Tax=Absidia repens TaxID=... [more]
A0A1X2GN64_9FUNG2.580e-1169.39mRNA splicing factor n=1 Tax=Hesseltinella vesicul... [more]
K8Z0J6_NANGC2.800e-1134.93Coiled-coil domain-containing protein 12 n=3 Tax=M... [more]
A0A7S2W1E1_9STRA6.620e-1134.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
S2JYD1_MUCC11.400e-1060.56Uncharacterized protein n=5 Tax=Mucor TaxID=4830 R... [more]
A0A250XHF4_9CHLO2.060e-1066.67Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8H7VG57_9FUNG2.140e-1078.57Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
IPR013169mRNA splicing factor, Cwf18PFAMPF08315cwf18coord: 2..152
e-value: 1.5E-19
score: 71.0
IPR013169mRNA splicing factor, Cwf18PANTHERPTHR31551FAMILY NOT NAMEDcoord: 14..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1129contigE-siliculosus-1a_F_contig1129:22559..26162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1129.854.1mRNA_E-siliculosus-1a_F_contig1129.854.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1129 21693..26239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1129.854.1 ID=prot_E-siliculosus-1a_F_contig1129.854.1|Name=mRNA_E-siliculosus-1a_F_contig1129.854.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=186bp
MSESGAERSSRLKALKEKANKSIKFRNYRPQDATIRQQALDSSKAGEPTS
GSSSGGASKGEGAPSSSGNSMGGGRKEGEEEPEEEQEGKRKAPESSLIQQ
ELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRE
RMAEEAANASSSGEEGSGSSSSGEEESGSSSEDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013169mRNA_splic_Cwf18