prot_E-siliculosus-1a_F_contig1129.853.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1129.853.1
Unique Name	prot_E-siliculosus-1a_F_contig1129.853.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	789

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1129.853.1 vs. uniprot
Match: D8LKM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM2_ECTSI)

HSP 1 Score: 1263 bits (3269), Expect = 0.000e+0
Identity = 735/789 (93.16%), Postives = 738/789 (93.54%), Query Frame = 0

Query:    1 RNTAGGGAASLFNRSEGRQRHSTSAGALNPYEDVADGEGDAAMADEAXXXXXXXXXXXXXXXXXXGAADPNEYTHPLLKYYRMHGRIPPLSFFNTYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGETLEASETSVKLFWEGSFLMAVEFYLAFQILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWATMFLWIVVCLLMAHLTPTVGSGSAKALEAMVSQNGGGTDSAATPNMPPPTNAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRKPGTPNGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACWDSFAFWMDQRNTQNNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFVRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGEDDD-EEVWEAGSAGDEMSEDAALSAAEKEQGREETPEWARVPTDAGGKPAADLV 788
            RNTA GGAASLF  SEGRQRHSTSAGALNPYEDVADGEGDA MADEA     XXXXXXXX     GAADPNEYTHPLLKYYRMHGRIPPLSFFNTYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIK GETLE  +TSVKLFWEGSFLMAVEFYLAFQILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEW TMFLWIVVCLLMAHLTPTVGSG AKALEAMV QNGGGTDSAATPNMPP  NAPGLDEAANNLALAMAAERRKGSRAGLT+SPSKGSPPRLSGRKP TPNGGRXXXXXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ACWDSFAFWMDQRNTQNNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFVRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGEDDD EEVWEAGSAGDE+SEDAALSAAEKEQGREETPEWARVPTDAGG PAADLV
Sbjct:  273 RNTAAGGAASLFKMSEGRQRHSTSAGALNPYEDVADGEGDAPMADEAAAAEGXXXXXXXXESGEGGAADPNEYTHPLLKYYRMHGRIPPLSFFNTYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKTGETLE-EDTSVKLFWEGSFLMAVEFYLAFQILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWTTMFLWIVVCLLMAHLTPTVGSGRAKALEAMVIQNGGGTDSAATPNMPPTANAPGLDEAANNLALAMAAERRKGSRAGLTSSPSKGSPPRLSGRKPSTPNGGRXXXXXXXXXXXXXXXXXXXXXXXXETNGSTALAGNEGAEMMRVSTPTRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ACWDSFAFWMDQRNTQNNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFVRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGEDDDDEEVWEAGSAGDEISEDAALSAAEKEQGREETPEWARVPTDAGGNPAADLV 1059

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BLAST of mRNA_E-siliculosus-1a_F_contig1129.853.1 vs. uniprot
Match: A0A6H5K6P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P5_9PHAE)

HSP 1 Score: 1001 bits (2587), Expect = 0.000e+0
Identity = 599/829 (72.26%), Postives = 606/829 (73.10%), Query Frame = 0

Query:   72 EYTHPLLKYYRMHGRIPPLSFFNTYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGETLEAS------------------------------------ETSVKLFWEGSFLMAVEFYLAFQ-------------------------------------------------------------ILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWATMFLWIVVCLLMAHLTPTVGSGSAKALEAMVSQNGGGTDSAATPNMPPPTNAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRKPGTPNGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACWDSFAFWMDQRNTQNNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFVRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQ---------------VGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGEDDDEEVWEAGSAGDEMSEDAALSAAEKEQGREETPEWARVPTDAGGKPAADLV 788
            EYTHPLLKYYRMHGRIPPLSFF TYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGETL+A                                     +TSVKLFWEGSFLMAVEFYLAFQ                                                             ILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWATMFLWIVVCLLMAHLTPTVGSG AKALE MVSQNGGG  SAATPNMP   NAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRK  TPNGG   XXXXXXXXXXXXXXXXXX                              XXXXXXXXXX                             D +   +                             RGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIF+ SSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQ               VGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIG DDDEEVW+AGS  DE+SEDAALSAAEKEQGREETPEWARVPTDAGGKPAAD V
Sbjct:   27 EYTHPLLKYYRMHGRIPPLSFFITYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGETLQAKHVVFNVLVLVIVWPWVYIAYRRVLTNLRAKYCGHEEDTSVKLFWEGSFLMAVEFYLAFQANGCLTHAPVGEEAICDNIIHSNLISGMNIILIFLVVRVILFKMGDLTITRTLHLELRPYEILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWATMFLWIVVCLLMAHLTPTVGSGRAKALEVMVSQNGGGGGSAATPNMPSTANAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRKSSTPNGGPRQXXXXXXXXXXXXXXXXXXTAATETNGSTPLAGNEGAEMMRVSTPTREGXXXXXXXXXXEDWVAVDGEDGD-----------------DDKEDDS-----------------------------RGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFLWSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQDRYYVVIERSFTFLQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGGDDDEEVWDAGSTRDEISEDAALSAAEKEQGREETPEWARVPTDAGGKPAADFV 809

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1129.853.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1129.853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LKM2_ECTSI	0.000e+0	93.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K6P5_9PHAE	0.000e+0	72.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 455..476
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 580..596
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 127..131
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 638..648
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 274..454
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..101
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 482..501
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 597..615
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 560..579
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 210..232
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 102..126
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 616..637
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 533..537
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 233..251
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 513..532
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 707..788
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 477..481
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 673..683
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 684..706
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 252..273
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 538..559
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 132..153
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 154..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 649..672
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 502..512
None	No IPR available	TMHMM	TMhelix		coord: 455..477
None	No IPR available	TMHMM	TMhelix		coord: 612..634
None	No IPR available	TMHMM	TMhelix		coord: 210..232
None	No IPR available	TMHMM	TMhelix		coord: 580..602
None	No IPR available	TMHMM	TMhelix		coord: 684..706
None	No IPR available	TMHMM	TMhelix		coord: 252..274
None	No IPR available	TMHMM	TMhelix		coord: 513..532
None	No IPR available	TMHMM	TMhelix		coord: 89..111
None	No IPR available	TMHMM	TMhelix		coord: 482..501
None	No IPR available	TMHMM	TMhelix		coord: 655..674
None	No IPR available	TMHMM	TMhelix		coord: 537..559
None	No IPR available	TMHMM	TMhelix		coord: 131..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1129	contig	E-siliculosus-1a_F_contig1129:1199..19551 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1129.853.1	mRNA_E-siliculosus-1a_F_contig1129.853.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1129 1199..19551 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1129.853.1 ID=prot_E-siliculosus-1a_F_contig1129.853.1|Name=mRNA_E-siliculosus-1a_F_contig1129.853.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=789bp
RNTAGGGAASLFNRSEGRQRHSTSAGALNPYEDVADGEGDAAMADEAAAA
EGTAAADGGGESGEGGAADPNEYTHPLLKYYRMHGRIPPLSFFNTYLCEI
VFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLT
LGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGETLEASETSVKLFW
EGSFLMAVEFYLAFQILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGL
EWATMFLWIVVCLLMAHLTPTVGSGSAKALEAMVSQNGGGTDSAATPNMP
PPTNAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRKPGT
PNGGRQQQRDGNNNTDTNDDGGATATAATETNGSTPLAGNDGAEMMRAST
PTREGGGGGGGEDWVAVDGEDGDDDKEDDSRCCCACWDSFAFWMDQRNTQ
NNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWL
ISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYP
CLFYGIQALKLGLHRKFSDHLGLVREAMKIFVRSSVLLMVLMYLAFECIG
CLNSRPEADCAALLYANTQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSF
TWPQVAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAA
LLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGEDDDEEVWEAGSAGDE
MSEDAALSAAEKEQGREETPEWARVPTDAGGKPAADLV*