prot_E-siliculosus-1a_F_contig1126.843.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1126.843.1
Unique Nameprot_E-siliculosus-1a_F_contig1126.843.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length573
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1126.843.1 vs. uniprot
Match: D8LRC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC3_ECTSI)

HSP 1 Score: 853 bits (2203), Expect = 2.810e-307
Identity = 468/525 (89.14%), Postives = 484/525 (92.19%), Query Frame = 0
Query:   51 MMNMEFELLRCDGGSHPDAAEAADGGLTVKGVWSHLRSKLERSWENAQRIVPSADNASREGAEFAAKTGNTQDAASSAGTDAGVGWQALAVVTAPVSHLFGMLGGMPGWFSDAMFEVNQQGGSAYSDLSQRLVLVENRPRLLELACSLVAPSLLPQPPAAPATAAAA-GMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKATAQQPSGWVSTMAQAWLSSAXXXXXXXXXXXXXXXXXXXVCECAARGPCTIRASPGREPCLHVEVGDVNKRGGRSSTGGDDG-FSVESIESTSAVRLRTYSLATTTAGAASPRASSAEGRDAXXXXXXAVSDNLVALHAAAVRLGLPPSVAVPVYPAMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAVVLRAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNLLGVMLAFWRMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGIFLVYNGVSDTDVGM 573
            MMNMEFELLRCD GSH DAA AADGGLTVKGVWSHLRSKLERSWENAQRIVPSADNASREGAEFAAKTG+T DAASSAG+DAG+GWQALAVVTAPVSHLFGMLGGMPGWFSDA+FEVNQ+GGSAY+DLSQRLVLVENRPRLLELACSLVAP L PQPPAAPATAAAA GMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKA+AQQPSGWVSTMAQAW+SSA          XXXXXXX  VCECA RGPCTIRASPGREPCLHVEVGDV+KRGGRS        FS ES+ESTSAVRLRTYSLATT AGAASPRASSA+GR++      AVSD LVALHA+AVRLGLPPSVAVPVY AMLL GVALLLVAQPLSESRAFHYLLSALLGGVVGAAA VLRAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNL GVMLAFW+MGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSG+FLVYNGVSDTDVGM
Sbjct:    1 MMNMEFELLRCDVGSHRDAAAAADGGLTVKGVWSHLRSKLERSWENAQRIVPSADNASREGAEFAAKTGSTLDAASSAGSDAGIGWQALAVVTAPVSHLFGMLGGMPGWFSDAVFEVNQKGGSAYNDLSQRLVLVENRPRLLELACSLVAPPLHPQPPAAPATAAAAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKASAQQPSGWVSTMAQAWVSSAAGGGDAISAIXXXXXXX--VCECAGRGPCTIRASPGREPCLHVEVGDVSKRGGRSXXXXXXXXFSAESVESTSAVRLRTYSLATTAAGAASPRASSADGRESAAAT--AVSDALVALHASAVRLGLPPSVAVPVYAAMLLTGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAAVLRAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNLPGVMLAFWKMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGVFLVYNGVSDTDVGM 521          
BLAST of mRNA_E-siliculosus-1a_F_contig1126.843.1 vs. uniprot
Match: A0A6H5KR73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR73_9PHAE)

HSP 1 Score: 833 bits (2152), Expect = 1.080e-297
Identity = 476/576 (82.64%), Postives = 496/576 (86.11%), Query Frame = 0
Query:    1 GEGAVKVETGEQDGVRIEFVGKTEGTIPKPDRPPPQPQPAAGATAA---TPAEMMNMEFELLRCDGGSHPDAAEAADGGLTVKGVWSHLRSKLERSWENAQRIVPSADNASREGAEFAAKTGNTQDAASSAGTDAGVGWQALAVVTAPVSHLFGMLGGMPGWFSDAMFEVNQQGGSAYSDLSQRLVLVENRPRLLELACSLVAPSLLPQPPAAPATAAAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKATAQQPSGWVSTMAQAWLSSAXXXXXXXXXXXXXXXXXXXVCECAARGPCTIRASPGREPCLHVEVGDVNKRGGRSSTGGDDGFSVESIESTSAVRLRTYSLATTTAGAASPRASSAEGRDAXXXXXXAVSDNLVALHAAAVRLGLPPSVAVPVYPAMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAVVLRAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNLLGVMLAFWRMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGIFLVYNGVSDTDVGM 573
            GEGAVKVETGE DGVRIEFVGKTEGTIP+PDRP                 PAEM+NMEFELLRCDGGSH DAA AAD GLTVKGVWSHLRSKLERSWENAQRIVPSAD+ASREGAE AA  G+TQDAASSAG+DAG+GW+ALAVV +PV HLFGMLGGMPGWFSDA+FEVNQ+GGSAY DLSQRLVLVENRPRLLELACSLVAPSL PQPPAA  TAA  GMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKATAQQPSGWVSTMA AW+SSA       XXXXXXXXXXX VCECA RGPCTIRASPGREPCLHVEVGDVNKRGGRS  GG  GFS ES+ESTSAVRLRTYSL TT AGAASPRASSAEG+++      AV D LVALHAAAVRLG+PPS+AVPVY AMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAVVLRAVKNP RSL R L+L GVVTWLVVAAGVDHIPSPAELLSNL GVMLA WRM L S PWAGKAF AASGLAGVLTTWRQGLFLEEADE RGTW         VLT SGIFL+Y+GVSD DVGM
Sbjct:  139 GEGAVKVETGELDGVRIEFVGKTEGTIPEPDRPXXXXXXXXXXXXXXXXAPAEMINMEFELLRCDGGSHRDAAAAADRGLTVKGVWSHLRSKLERSWENAQRIVPSADDASREGAESAATAGSTQDAASSAGSDAGIGWRALAVVASPVHHLFGMLGGMPGWFSDAVFEVNQKGGSAYKDLSQRLVLVENRPRLLELACSLVAPSLHPQPPAASVTAA--GMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKATAQQPSGWVSTMAPAWVSSAAAGGGDAXXXXXXXXXXX-VCECAGRGPCTIRASPGREPCLHVEVGDVNKRGGRSGGGG--GFSAESVESTSAVRLRTYSLPTTAAGAASPRASSAEGQESAAAT--AVLDALVALHAAAVRLGMPPSIAVPVYAAMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAVVLRAVKNPHRSLFRLLVLSGVVTWLVVAAGVDHIPSPAELLSNLPGVMLACWRMELWSLPWAGKAFLAASGLAGVLTTWRQGLFLEEADETRGTW---------VLTLSGIFLLYSGVSDPDVGM 698          
BLAST of mRNA_E-siliculosus-1a_F_contig1126.843.1 vs. uniprot
Match: A0A835ZAD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.220e-7
Identity = 54/178 (30.34%), Postives = 72/178 (40.45%), Query Frame = 0
Query:  426 SESRAFHYLLSALLGGVVGAAAV-------------VLRAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNLLG-----------------VMLAFWRMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTW---FNGQACIRRVLTFSGIFLVYNGVSDTD 570
            +ESRAFH++LSA++G  + A  V              +  V   R +          +               A LLS  LG                 V LAFW  G     W GK +FA S LAGVL TWR GL  E A+   G W    N QA ++R +T  G+ L+    +D +
Sbjct:  259 AESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEG--GGWRALLNAQANVQRAVTAVGLALLLASTTDVE 434          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1126.843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRC3_ECTSI2.810e-30789.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR73_9PHAE1.080e-29782.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAD5_9STRA1.220e-730.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 460..479
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 396..406
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 480..498
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 499..524
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 431..453
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 525..573
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 426..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 375..395
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..425
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 454..459
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..374
NoneNo IPR availableTMHMMTMhelixcoord: 431..453
NoneNo IPR availableTMHMMTMhelixcoord: 399..421
NoneNo IPR availableTMHMMTMhelixcoord: 460..482
NoneNo IPR availableTMHMMTMhelixcoord: 502..524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1126contigE-siliculosus-1a_F_contig1126:32898..36832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1126.843.1mRNA_E-siliculosus-1a_F_contig1126.843.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1126 32898..36832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1126.843.1 ID=prot_E-siliculosus-1a_F_contig1126.843.1|Name=mRNA_E-siliculosus-1a_F_contig1126.843.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=573bp
GEGAVKVETGEQDGVRIEFVGKTEGTIPKPDRPPPQPQPAAGATAATPAE
MMNMEFELLRCDGGSHPDAAEAADGGLTVKGVWSHLRSKLERSWENAQRI
VPSADNASREGAEFAAKTGNTQDAASSAGTDAGVGWQALAVVTAPVSHLF
GMLGGMPGWFSDAMFEVNQQGGSAYSDLSQRLVLVENRPRLLELACSLVA
PSLLPQPPAAPATAAAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVAT
EAKATAQQPSGWVSTMAQAWLSSAAAGGGGDAISAIIGGGGGGVCECAAR
GPCTIRASPGREPCLHVEVGDVNKRGGRSSTGGDDGFSVESIESTSAVRL
RTYSLATTTAGAASPRASSAEGRDAAAAAAAAVSDNLVALHAAAVRLGLP
PSVAVPVYPAMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAVVL
RAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNLLGVMLAFW
RMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACI
RRVLTFSGIFLVYNGVSDTDVGM
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