prot_E-siliculosus-1a_F_contig1107.726.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1107.726.1
Unique Nameprot_E-siliculosus-1a_F_contig1107.726.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length219
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1107.726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 156..181
e-value: 29.0
score: 9.5
coord: 12..36
e-value: 72.0
score: 6.2
coord: 132..155
e-value: 370.0
score: 0.4
coord: 84..108
e-value: 9.7
score: 13.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..219
e-value: 2.1E-64
score: 219.8
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 87..103
e-value: 0.52
score: 11.1
NoneNo IPR availablePANTHERPTHR45974:SF116LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK1-RELATEDcoord: 41..170
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 106..219
NoneNo IPR availablePANTHERPTHR45974:SF116LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK1-RELATEDcoord: 2..123
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 2..123
coord: 41..170
NoneNo IPR availablePANTHERPTHR45974:SF116LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK1-RELATEDcoord: 106..219
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1107contigE-siliculosus-1a_F_contig1107:10443..22437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1107.726.1mRNA_E-siliculosus-1a_F_contig1107.726.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1107 10443..22437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1107.726.1 ID=prot_E-siliculosus-1a_F_contig1107.726.1|Name=mRNA_E-siliculosus-1a_F_contig1107.726.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=219bp
LAGNIPPELRDLRQLQRLLLYDNHLTGPIPSELGNLAALKELTLCSYQLS
GTIPAELGNLTALLGLYLNVNKLSGPIPVELGRLAVLEHLDLGGNELTGH
LPPQVGDLGPLQSLSLINNKLGGTIPAELGKLTALLRLYLNVNELSGHIP
RELGALSELRGLNLGQNKLEAGSIPPELGKLAATEYLSLSQNQLTGNIRP
ELGELRQLQRLLLHDNHLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp