prot_E-siliculosus-1a_F_contig11.680.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11.680.1
Unique Nameprot_E-siliculosus-1a_F_contig11.680.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length634
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11.680.1 vs. uniprot
Match: A0A6H5JGX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX4_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 2.590e-154
Identity = 312/344 (90.70%), Postives = 316/344 (91.86%), Query Frame = 0
Query:  290 HVPHPQMPHPVDSARVDGEGRRRSLRPRKNPANGNVTDPPTPATEVGSRSRHRLRKYNNPAPPSAHVPQQTNPAPTLKREEGSARAIGSRAKTCNQVEVDGSKCPRRPSFGFPGDKSASRCASHKLEGHEDITSRRCDEEGCSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRVAPGGFNACNRNSSFGFRGGKRISCAQHKQKGMINLNTPRCRGPECYLTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIPSYNYDMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKAGGKTAXXXXXXXXXXXXDVANNYQRQGKKRKARE 633
            HV H QMP PVDSARVDGEGRRRSLRPRK+PANGNVTDPPTPATEVGSRSR RLRKYNNPAPPSAHVPQQTNPAP LKREEGSARAIGSR KTC+Q+E DGSKC RRPSFGFPGDK ASRCASHKLEGHEDITSRRCD EGCSRIPS   PGGNSRIRF          DYHKGARSCRVAPGGFNACNRNSSFGF+GGKRISCAQHKQKGMINLNTPRCRGPECYLTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIPSYNYDMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKAGGKTAXXXXXXXXX   DV NNYQRQGKKRK RE
Sbjct:    2 HVHHRQMPPPVDSARVDGEGRRRSLRPRKHPANGNVTDPPTPATEVGSRSRLRLRKYNNPAPPSAHVPQQTNPAPNLKREEGSARAIGSRTKTCDQMEDDGSKCLRRPSFGFPGDKRASRCASHKLEGHEDITSRRCDGEGCSRIPSM--PGGNSRIRFXXXXXXXXXXDYHKGARSCRVAPGGFNACNRNSSFGFKGGKRISCAQHKQKGMINLNTPRCRGPECYLTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIPSYNYDMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKAGGKTAXXXXXXXXXDMVDVVNNYQRQGKKRKGRE 343          
BLAST of mRNA_E-siliculosus-1a_F_contig11.680.1 vs. uniprot
Match: A0A6H5JRD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD0_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 5.210e-52
Identity = 92/113 (81.42%), Postives = 98/113 (86.73%), Query Frame = 0
Query:  296 MPHPVDSARVDGEGRRRSLRPRKNPANGNVTDPPTPATEVGSRSRHRLRKYNNPAPPSAHVPQQTNPAPTLKREEGSARAIGSRAKTCNQVEVDGSKCPRRPSFGFPGDKSAS 408
            MP PVDSA VDGEGRRRSLRPRK+PAN N+TDPPTPATEVGSRS  RLRK NNPAPPSAHVPQQTN  P L+RE+GSARAIGSR KTC+QVE DGSKC RRPSFGFPG +  S
Sbjct:    1 MPPPVDSAHVDGEGRRRSLRPRKHPANDNITDPPTPATEVGSRSCLRLRKCNNPAPPSAHVPQQTNTVPNLEREKGSARAIGSRTKTCDQVEDDGSKCLRRPSFGFPGTRQES 113          
BLAST of mRNA_E-siliculosus-1a_F_contig11.680.1 vs. uniprot
Match: A0A6H5JA62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA62_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.680e-7
Identity = 46/156 (29.49%), Postives = 69/156 (44.23%), Query Frame = 0
Query:  359 QTNPAPTLKREEGSARAIGSRAKTCNQVEVDGSKCPRRPSFGFPGDKSASRCASHKLEGHEDITSRRCDEEG--CSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRVAPGGFNACNRNSSFGFRGGKRISCAQHKQKGMINLNTPRCRGP 512
            +TNP+    R  G ++A+  +  T   +  +   C +  SF   G      C  H   G +++  + CD +   C    S+   G   ++R C  H  P   +       C+V  GG   C+R SSFG +GGK I C  HK  GM+ + T  CR P
Sbjct:   95 KTNPS----RGGGKSKAMNGKKSTGALLTCESPLCNKTSSFAHRGQTRRRLCKRHAWPGMQNVYYKYCDADSGRCPERASYESAG---KLR-CLEHCEP---EMRPRNNICQVEGGG---CDRQSSFGVKGGKPILCTLHKGAGMVQVRTKTCRHP 236          
BLAST of mRNA_E-siliculosus-1a_F_contig11.680.1 vs. uniprot
Match: D8LBM0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 8.000e-7
Identity = 47/163 (28.83%), Postives = 66/163 (40.49%), Query Frame = 0
Query:  366 LKREEGSARAI-------GSRAKTCNQVEVDGSK-------CPRRPSFGFPGDKSASRCASHKLEGHEDITSRRCDEEG--CSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRVAPGGFNACNRNSSFGFRGGKRISCAQHKQKGMINLNTPRCRGP 512
            +  E   ARAI       G ++KT N     G+        C + PSF   G      C  H   G +++  + CD +   C    S+   G    ++ C     P           C+V  GG   C+R SSFG +GGK + C  HK  GM+ + T  CR P
Sbjct:   13 VDEEAVGARAIKTSPPRRGEKSKTMNGKNSTGALLTCESPLCNKTPSFAHRGQTRRRFCKRHAWPGMQNVYYKYCDADSGRCPERASYESAGKLRCLQHCEPEMRPRNN-------ICQVEGGG---CDRQSSFGAKGGKPVLCTLHKGAGMVQVRTKTCRHP 165          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11.680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGX4_9PHAE2.590e-15490.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRD0_9PHAE5.210e-5281.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA62_9PHAE1.680e-729.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBM0_ECTSI8.000e-728.83EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 624..633

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11contigE-siliculosus-1a_F_contig11:37906..43988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11.680.1mRNA_E-siliculosus-1a_F_contig11.680.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11 36981..43988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11.680.1 ID=prot_E-siliculosus-1a_F_contig11.680.1|Name=mRNA_E-siliculosus-1a_F_contig11.680.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=634bp
MASHVGEDYSSKGEREGLSPAAAAAVPKAANLAEGRVKRETLCVRESPEQ
EGGGNGGVAAGAGGAGGGCRGDNDGRRGGGIPEVPSTSITNGEGSGTGNQ
SNFDGRPVPEEPPHAGASSCVVSTRPAAGAAVGRCLNGAGEGGGSGSSEA
GYGGHAATASATGLSSGLSTQESNSDRLPVAVGASALSEGTAAAADAAAA
TAAVGLREHTPAGGVQPGSCGGIQHKAAAADTSPAPAATVPAVPTPAVGN
HPPTTAGFPSASAVGVVDPGPSVDVAPLTELPRLAAPATHVPHPQMPHPV
DSARVDGEGRRRSLRPRKNPANGNVTDPPTPATEVGSRSRHRLRKYNNPA
PPSAHVPQQTNPAPTLKREEGSARAIGSRAKTCNQVEVDGSKCPRRPSFG
FPGDKSASRCASHKLEGHEDITSRRCDEEGCSRIPSFRKPGGNSRIRFCA
AHKPPGYEDYHKGARSCRVAPGGFNACNRNSSFGFRGGKRISCAQHKQKG
MINLNTPRCRGPECYLTPYFGLRGATPTYCSKHKQEGMINVISKRCEDQS
CDRIPSYNYDMVGAKAVYCNAHKAEGMVNVRHPRCADPDCKRQPSFGKAG
GKTAVYCVVHKEPDMVDVANNYQRQGKKRKARE*
back to top