prot_E-siliculosus-1a_F_contig1099.677.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1099.677.1
Unique Nameprot_E-siliculosus-1a_F_contig1099.677.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length548
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1099.677.1 vs. uniprot
Match: A0A6H5L0H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H8_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 1.890e-126
Identity = 415/528 (78.60%), Postives = 418/528 (79.17%), Query Frame = 0
Query:   22 MPTTPAGGKENIGGVDPDAANTTKAPKPARRGVGPRSGTKNASPRVSITGSSVGPTVAMKSSAVSPAPSKTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAVLVSSPAPPRVVSDVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RGSMGKKRLRPNKEKNRQTKVISHPAARSSAPPLSLPSRGRSDFDFDSDDSAXXXXXXXAWNAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADGSRARPLERLAAASPAPGTRGAGTKATXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSEANSASSSPRGPWRLGALFADSDXXXXXXXXXXXGGVLAGCNWRLSDDENEGDDEIDLHKRRSPRRSAAGRRGPVSARKKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSPSVPVVDATAPSSSPGKASTSQQGIEEQAEQAELEAIRAQFRKVDSHRLSLSR 547
            MPTTPAGGKENIG  DPDA N TKAPKPARRGVGPRSGTKNASPRVSI GSSVG   A KSSAVSPAPSKTRP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RPAVLVSSPAPPRV  DV G  XXXXXXXXXXXXXXXXXXXXXXXXXXXX  RGSMG+KRL+PNKEKNRQTKVISHPAARSSAPPL LPSRGRSDFDFDSDDSA       AWNAVP                                E ADGSRARPLE  AA SPAPGTRGAGTKATXXXXXXXXXXXXXXXXXXXXXXXXXXX      SAS SPRGPWRLGALFADSDXXXXXXXXXXX G LAGCNWRLSDDENEGDDEIDLHKRRSPRR AA + GPVSARKK   XXXXXXXX          XXXXXXXXXX            GSLSPSVPVVD TA   SPGKASTSQQGIEEQAE AELEAIRAQFRKVDSHRLSLSR
Sbjct:    1 MPTTPAGGKENIGSGDPDA-NITKAPKPARRGVGPRSGTKNASPRVSIAGSSVGLVAAKKSSAVSPAPSKTRPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRL----RPAVLVSSPAPPRVACDVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRGSMGRKRLQPNKEKNRQTKVISHPAARSSAPPLRLPSRGRSDFDFDSDDSAADDENR-AWNAVPAAVEPASRKKARGGGAAGNKVKRMRASSGGRREAADGSRARPLEGFAATSPAPGTRGAGTKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEA--SASFSPRGPWRLGALFADSDXXXXXXXXXXXXG-LAGCNWRLSDDENEGDDEIDLHKRRSPRRFAARKEGPVSARKKMRRXXXXXXXXRGSDGCNSAGXXXXXXXXXXAMVEKAGGGAD-GSLSPSVPVVDGTAAGGSPGKASTSQQGIEEQAEHAELEAIRAQFRKVDSHRLSLSR 518          
BLAST of mRNA_E-siliculosus-1a_F_contig1099.677.1 vs. uniprot
Match: D7FZ06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ06_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 5.250e-114
Identity = 409/550 (74.36%), Postives = 412/550 (74.91%), Query Frame = 0
Query:   19 NFSMPTTPAGGKENIGGVDPDAANTTKAPKPARRGVGPRSGTKNASPRVSITGSSVGPTVAMKSSAVSPAPSKTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAVLVSSPAPPRVVSDVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------RGSMGKKRLRPNKEKNRQTKVISHPAARSSAPPLSLPSRGRSDFDFDSDDSAXXXXXXXAWNAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADGSRARPLERLAAASPAPGTRGAGTKATXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSEANSASSSPRGPWRLGALFADSDXXXXXXXXXXXGGVLAGCNWRLSDDENEGDDEIDLHKRRSPRRSAAGRRGPVSA--------------RKKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLSPSVPVVDATAPSSSPGKASTSQQGIEEQAEQAELEAIRAQFRKVDSHRLSLSR 547
            +F+MPTTPA GKENIGGVDPDAANTTKAPKPARRGVGPRSGTKN SPRVSITGSSVG T A KSSAVSPA        XXXXXXXXXXXXXXXXXXXXXXXX    XXXXX                              RPAVLVSSPAPPRVVSDVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       RGSMGKKRL+PNKEKNRQTKVISHPAARSSAPPL LPSRGRSDFDFDSDDS XXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADGSRARPLE LAAASPAPGTR AGTKAT               XXXXXXXXXXXX            RGPWRLGALFADS XXXXXXXXXXX   LAGCNWRLSDDENEGDDEIDLHKRRSPRRSAAGR                    R        XXXXXXXXXXXXXXXXXXXXXXXXXX           GSLSPSVPVVDATA   SPGKASTSQQGIEEQAEQAELEAIRAQFRKVDSHRLSLSR
Sbjct:   19 SFNMPTTPASGKENIGGVDPDAANTTKAPKPARRGVGPRSGTKNTSPRVSITGSSVGRTAAKKSSAVSPAXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXPRALXXXXXSSGRGVTVAASARQGSAAGKPQAQQKQKRSRPAVLVSSPAPPRVVSDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSMGKKRLKPNKEKNRQTKVISHPAARSSAPPLRLPSRGRSDFDFDSDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADGSRARPLEGLAAASPAPGTRVAGTKATATTGSPSSSLKLTAHXXXXXXXXXXXXXXXXXXXXXXR-RGPWRLGALFADSXXXXXXXXXXXXXXXLAGCNWRLSDDENEGDDEIDLHKRRSPRRSAAGRGXXXXXXXXXXXXXXXXXXDRGSDGCNSAXXXXXXXXXXXXXXXXXXXXXXXXXXAKVEQAGGWADGSLSPSVPVVDATAAGGSPGKASTSQQGIEEQAEQAELEAIRAQFRKVDSHRLSLSR 564          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1099.677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0H8_9PHAE1.890e-12678.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ06_ECTSI5.250e-11474.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1099contigE-siliculosus-1a_F_contig1099:29778..31421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1099.677.1mRNA_E-siliculosus-1a_F_contig1099.677.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1099 29778..31421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1099.677.1 ID=prot_E-siliculosus-1a_F_contig1099.677.1|Name=mRNA_E-siliculosus-1a_F_contig1099.677.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=548bp
FTSPPRYSPNSQTYLQQVNFSMPTTPAGGKENIGGVDPDAANTTKAPKPA
RRGVGPRSGTKNASPRVSITGSSVGPTVAMKSSAVSPAPSKTRPAAAAAA
AARRSSCSSSSISTATAATGSRALAAKASSSGRGVTVAASARQVSAAAKP
QAQQKQKRSRPAVLVSSPAPPRVVSDVGGSSGGSGGGGGKKRKSAVVGGE
GGGKKQQQQRGSMGKKRLRPNKEKNRQTKVISHPAARSSAPPLSLPSRGR
SDFDFDSDDSAADDDDNRAWNAVPAAAVPASRKKARGGGAAGNKVKRMRT
SSGGRREEADGSRARPLERLAAASPAPGTRGAGTKATTTAASPSSSPKQT
AHHSSTSTARSGGGSRSEANSASSSPRGPWRLGALFADSDDDDDPEGDGE
GGGVLAGCNWRLSDDENEGDDEIDLHKRRSPRRSAAGRRGPVSARKKTRR
ASGGGRGGRGSDECNSAGGSGGRGGEGNEAKVEQAGGGGDGSLSPSVPVV
DATAPSSSPGKASTSQQGIEEQAEQAELEAIRAQFRKVDSHRLSLSR*
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