Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1076.533.1 vs. uniprot
Match:
D7G7U7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U7_ECTSI)
HSP 1 Score: 131 bits (329), Expect = 5.640e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 23 MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIR 93
MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIR
Sbjct: 1 MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIR 71
The following BLAST results are available for this feature:
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
20 40 60 80 100 120 140 160 180 200 Score = Score = Score = Score = Score = Score = Score = Sequence Coil TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 81..144 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 49..69 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 44..48 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..20 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 70..205 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 21..43 None No IPR available TMHMM TMhelix coord: 49..71
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1076.533.1 ID=prot_E-siliculosus-1a_F_contig1076.533.1|Name=mRNA_E-siliculosus-1a_F_contig1076.533.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=206bp back to top