Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1069.486.1 vs. uniprot
Match:
D8LRK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK1_ECTSI)
HSP 1 Score: 457 bits (1177), Expect = 2.880e-162
Identity = 222/244 (90.98%), Postives = 232/244 (95.08%), Query Frame = 0
Query: 1 MDSAEGGTDYYDSGDEHGNDLGVVMKENPSLWGMFIMAYLMMWVTGLAFSSTCFNRSRFYRGGLCMKGHNPIARVIFVPFLVLIVVPAFGIFTAPVMMCWLLCRICFLLGGVDCNFPAGWLMRPPQRRRHLSNFPSGRERRWKRRGWLVMLRARHQIFLAQLQQNDSQPWLSKRKLRDLCGITRVMTANDPLATAGNEPSVGTQRIADIELYEQGTYDPEFAQAVVSVAGIMEEGIFRGITLYL 244
MDSAEGG+DYYDSGDE GNDLG VMKENPSLW MFIMAYL++WV GLAFSSTCFNRSRFYRGGLCM+GHNPI+R+IFVPFLVL+VVPAFGIFTAPVM CW LCR+CFLLG VDC+FPAGWLMRPPQRRRHLSNFPSGRERRWKRRGWLVMLRARHQIFLAQLQQNDSQPWL KRKLRDLCGITRVMTA+DPLATAGNEPSVG Q IADIEL EQGTYD EFAQAVVSVAGIMEEGIFRGITLYL
Sbjct: 5 MDSAEGGSDYYDSGDEQGNDLGDVMKENPSLWAMFIMAYLVVWVQGLAFSSTCFNRSRFYRGGLCMQGHNPISRMIFVPFLVLVVVPAFGIFTAPVMTCWSLCRVCFLLGRVDCDFPAGWLMRPPQRRRHLSNFPSGRERRWKRRGWLVMLRARHQIFLAQLQQNDSQPWLCKRKLRDLCGITRVMTADDPLATAGNEPSVGAQGIADIELNEQGTYDQEFAQAVVSVAGIMEEGIFRGITLYL 248
BLAST of mRNA_E-siliculosus-1a_F_contig1069.486.1 vs. uniprot
Match:
A0A6H5JF96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF96_9PHAE)
HSP 1 Score: 172 bits (435), Expect = 5.160e-51
Identity = 110/243 (45.27%), Postives = 118/243 (48.56%), Query Frame = 0
Query: 2 DSAEGGTDYYDSGDEHGNDLGVVMKENPSLWGMFIMAYLMMWVTGLAFSSTCFNRSRFYRGGLCMKGHNPIARVIFVPFLVLIVVPAFGIFTAPVMMCWLLCRICFLLGGVDCNFPAGWLMRPPQRRRHLSNFPSGRERRWKRRGWLVMLRARHQIFLAQLQQNDSQPWLSKRKLRDLCGITRVMTANDPLATAGNEPSVGTQRIADIELYEQGTYDPEFAQAVVSVAGIMEEGIFRGITLYL 244
DSAEGG+DYYDSGDEHGNDLG VMKEN S C NRSRFYRGGLCMKGHNPI+RVI + + LA WL +RKLRD CGITRVMTA+DPL AGNEPSVG Q IA IELYEQGTYD EFAQAV+SVA IMEEG+F ITLYL
Sbjct: 6 DSAEGGSDYYDSGDEHGNDLGDVMKENRS--------------------DKCLNRSRFYRGGLCMKGHNPISRVIMI------------------------------------------------------------------------------LSLA---------WLCERKLRDPCGITRVMTADDPLGIAGNEPSVGAQGIAGIELYEQGTYDQEFAQAVISVAAIMEEGVFCEITLYL 141
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1069.486.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M D S A E G G T D Y Y D S G D E H G N D L G V V M K E N P S L W G M F I M A Y L M M W V T G L A F S S T C F N R S R F Y R G G L C M K G H N P I A R V I F V P F L V L I V V P A F G I F T A P V M M C W L L C R I C F L L G G V D C N F P A G W L M R P P Q R R R H L S N F P S G R E R R W K R R G W L V M L R A R H Q I F L A Q L Q Q N D S Q P W L S K R K L R D L C G I T R V M T A N D P L A T A G N E P S V G T Q R I A D I E L Y E Q G T Y D P E F A Q A V V S V A G I M E E G I F R G I T L Y L * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 2.88e-162 / Id = 90.98 Expect = 5.16e-51 / Id = 45.27 Sequence D8LRK1_ECTSI A0A6H5JF96_9PHAE
Match Name E-value Identity Description
D8LRK1_ECTSI 2.880e-162 90.98 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF96_9PHAE 5.160e-51 45.27 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M D S A E G G T D Y Y D S G D E H G N D L G V V M K E N P S L W G M F I M A Y L M M W V T G L A F S S T C F N R S R F Y R G G L C M K G H N P I A R V I F V P F L V L I V V P A F G I F T A P V M M C W L L C R I C F L L G G V D C N F P A G W L M R P P Q R R R H L S N F P S G R E R R W K R R G W L V M L R A R H Q I F L A Q L Q Q N D S Q P W L S K R K L R D L C G I T R V M T A N D P L A T A G N E P S V G T Q R I A D I E L Y E Q G T Y D P E F A Q A V V S V A G I M E E G I F R G I T L Y L * 20 40 60 80 100 120 140 160 180 200 220 240 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 52..71
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..30
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 31..51
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 123..244
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 72..92
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 93..97
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 98..122
None No IPR available TMHMM TMhelix coord: 75..97
None No IPR available TMHMM TMhelix coord: 32..54
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1069.486.1 ID=prot_E-siliculosus-1a_F_contig1069.486.1|Name=mRNA_E-siliculosus-1a_F_contig1069.486.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=245bp MDSAEGGTDYYDSGDEHGNDLGVVMKENPSLWGMFIMAYLMMWVTGLAFS STCFNRSRFYRGGLCMKGHNPIARVIFVPFLVLIVVPAFGIFTAPVMMCW LLCRICFLLGGVDCNFPAGWLMRPPQRRRHLSNFPSGRERRWKRRGWLVM LRARHQIFLAQLQQNDSQPWLSKRKLRDLCGITRVMTANDPLATAGNEPS VGTQRIADIELYEQGTYDPEFAQAVVSVAGIMEEGIFRGITLYL* back to top