prot_E-siliculosus-1a_F_contig10615.439.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.020e-54 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 Query: 1 SSRRGGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 SSRRGGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK Sbjct: 984 SSRRGGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 1080
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI) HSP 1 Score: 187 bits (476), Expect = 3.030e-53 Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0 Query: 1 SSRRGGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 SSR+GGRRKAQA LRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK Sbjct: 893 SSRKGGRRKAQASLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 989
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A6A0A349_HAELA (DNA repair endonuclease UVH1 (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A349_HAELA) HSP 1 Score: 131 bits (329), Expect = 9.970e-38 Identity = 66/94 (70.21%), Postives = 76/94 (80.85%), Query Frame = 0 Query: 4 RGGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 RGG KAQ P +VVVD+REF S LP +LHQQGFELVPL I VGDYVL+P +CVERK+L DL S++SGRLY+Q EAM KHYK PVLLIEF D+ Sbjct: 9 RGGAAKAQ-PRKVVVDMREFMSSLPAVLHQQGFELVPLTIEVGDYVLSPTMCVERKALPDLVSSLASGRLYSQAEAMCKHYKTPVLLIEFEGDR 101
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A3S3NAZ6_9MAGN (DNA repair endonuclease UVH1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NAZ6_9MAGN) HSP 1 Score: 129 bits (323), Expect = 1.210e-34 Identity = 57/93 (61.29%), Postives = 77/93 (82.80%), Query Frame = 0 Query: 5 GGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 GGR+ A+ +V+VD+REF S LPN+LHQ+G ++P+ + VGDYVL+P ICVERKS++DLF S +SGRLYNQVE M ++Y++PVLLIEF+ DK Sbjct: 49 GGRKAAERETQVIVDIREFMSSLPNVLHQKGMRIIPVTLEVGDYVLSPLICVERKSIADLFSSFASGRLYNQVETMARYYRIPVLLIEFSQDK 141
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: UPI001F5D44C3 (DNA repair endonuclease UVH1 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D44C3) HSP 1 Score: 134 bits (336), Expect = 2.320e-34 Identity = 59/93 (63.44%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 5 GGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 GGR+ + ++V+VD+REF S LPN+LHQ+G ++P+ + VGDYVL+P ICVERKS+SDLFQS +SGRLYNQVE M+++YK+PVLLIEF+ DK Sbjct: 747 GGRKPTEKEMQVIVDMREFMSSLPNVLHQKGIRIIPVTLEVGDYVLSPLICVERKSISDLFQSFASGRLYNQVETMIRYYKIPVLLIEFSQDK 839
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A8J4VB27_9ROSI (ERCC4 domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4VB27_9ROSI) HSP 1 Score: 127 bits (320), Expect = 2.470e-34 Identity = 54/93 (58.06%), Postives = 78/93 (83.87%), Query Frame = 0 Query: 5 GGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 GGR++ + ++V+VD+REF S LPN+LHQ+G ++P+ + VGDY+++P ICVERKS+ DLF S +SGRLY+QVE M+++YK+PVLLIEF+ DK Sbjct: 35 GGRKEIEREMQVIVDMREFMSSLPNILHQRGMHIIPVTLEVGDYIISPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYKIPVLLIEFSQDK 127
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: UPI000B8CC7E5 (DNA repair endonuclease UVH1-like isoform X3 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CC7E5) HSP 1 Score: 125 bits (315), Expect = 3.500e-34 Identity = 53/93 (56.99%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 5 GGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 GGR++A+ ++V+VD+REF S LPN+LH +G ++P+ + VGDY+L+P +CVERKS+ DLF S +SGRLY+QVE+M+++Y++PVLLIEF+ DK Sbjct: 41 GGRKEAEKEMQVIVDVREFMSSLPNMLHLKGMRIIPVTLEVGDYILSPLLCVERKSIQDLFSSFTSGRLYHQVESMVRYYRIPVLLIEFSQDK 133
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A103XQW0_CYNCS (DNA repair nuclease, XPF-type/Helicase n=3 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XQW0_CYNCS) HSP 1 Score: 126 bits (316), Expect = 5.040e-34 Identity = 54/93 (58.06%), Postives = 78/93 (83.87%), Query Frame = 0 Query: 5 GGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 GG+++A ++V+VD+REF S LPN+LHQ+G ++P+ + VGDY+L+P ICVERKS+ DLF S +SGRLY+QVE M+++Y++PVLLIEF+ DK Sbjct: 7 GGQKEADKEMQVIVDMREFMSSLPNVLHQKGMNIIPVTLEVGDYILSPMICVERKSIQDLFSSFASGRLYHQVEMMVRYYRMPVLLIEFSQDK 99
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A5J9WL85_9POAL (ERCC4 domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WL85_9POAL) HSP 1 Score: 132 bits (332), Expect = 8.040e-34 Identity = 59/93 (63.44%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 5 GGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 GGR+ ++V+VD+REF S LPN+LHQ+G ++VP+ + VGDYVL+P ICVERKS++DLFQS +SGRLYNQVE M+++YK+PVLLIEF+ DK Sbjct: 750 GGRKAPDKEMQVIVDMREFMSSLPNVLHQKGIQIVPVTLEVGDYVLSPLICVERKSIADLFQSFASGRLYNQVETMVRYYKIPVLLIEFSQDK 842
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Match: A0A1Y1I3K2_KLENI (Structure-specific endonuclease ERCC1-XPF n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3K2_KLENI) HSP 1 Score: 132 bits (332), Expect = 8.100e-34 Identity = 60/97 (61.86%), Postives = 80/97 (82.47%), Query Frame = 0 Query: 1 SSRRGGRRKAQAPLRVVVDLREFRSVLPNLLHQQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 97 S+R+ G R+ ++VVVD+REF S LP++LHQQG ++VP+ + VGDY+L+P++CVERKSL+DLFQS SGRLYNQ EAM ++YK PVLLIEF+ DK Sbjct: 962 STRKAGGRQKDRAMQVVVDMREFNSSLPSVLHQQGMKIVPVTLEVGDYILSPEVCVERKSLADLFQSFGSGRLYNQAEAMTRYYKTPVLLIEFDQDK 1058 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10615.439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig10615.439.1 ID=prot_E-siliculosus-1a_F_contig10615.439.1|Name=mRNA_E-siliculosus-1a_F_contig10615.439.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=97bpback to top |