Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1058.416.1 vs. uniprot
Match:
A0A6H5JGG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG0_9PHAE)
HSP 1 Score: 320 bits (819), Expect = 7.130e-110
Identity = 169/180 (93.89%), Postives = 176/180 (97.78%), Query Frame = 0
Query: 1 MRNSRTAVAGSTARLQPPEWAIFMVAVIADLVSAAGLLPVERLSLFRGLAVFLLYREWALAFACGFVLPRVVPLIAVCFLKQKWRAFKASAQERLNAVAATANERAGVSTNVPHAGMGGNISAHRNSRHTQEGEVSGYDVSSVSGEEVVELSSWAAETTSVGHDNSSSRGARVRQRNPLR 180
M+NSRTAVAGSTARLQPPEWAIFMVA+IADLVSAAGLLPVERLSLFRGLAVFLLY+EWALA ACGFVLPRVVPLIAVCFLKQKWRAFKASAQERLNA+AATANERAGVSTNVPHAGMGGN SAHR+SRH+QEG+VSGYDVSSVSGEEVVELSSWAAET SVGHDNSSS GARVRQRNPLR
Sbjct: 1 MKNSRTAVAGSTARLQPPEWAIFMVAIIADLVSAAGLLPVERLSLFRGLAVFLLYKEWALASACGFVLPRVVPLIAVCFLKQKWRAFKASAQERLNALAATANERAGVSTNVPHAGMGGNTSAHRHSRHSQEGKVSGYDVSSVSGEEVVELSSWAAETASVGHDNSSSSGARVRQRNPLR 180
BLAST of mRNA_E-siliculosus-1a_F_contig1058.416.1 vs. uniprot
Match:
D7G7L1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L1_ECTSI)
HSP 1 Score: 310 bits (793), Expect = 9.340e-105
Identity = 166/180 (92.22%), Postives = 169/180 (93.89%), Query Frame = 0
Query: 1 MRNSRTAVAGSTARLQPPEWAIFMVAVIADLVSAAGLLPVERLSLFRGLAVFLLYREWALAFACGFVLPRVVPLIAVCFLKQKWRAFKASAQERLNAVAATANERAGVSTNVPHAGMGGNISAHRNSRHTQEGEVSGYDVSSVSGEEVVELSSWAAETTSVGHDNSSSRGARVRQRNPLR 180
M+NSRT VAG TARLQPPEWAIFMVAVIADLVSAAGLLP ERLSLFRGLAVFLLYREWALAFACGFVLPRVVPLIAVCFLKQKWRAF ASAQERLNA+ ATANE AG+STNVP AGMGGN SAHR SRHTQEGEVSGYDVSSVSGEEVVELSSWAAETTSVGH NSSS GARVRQRNPLR
Sbjct: 78 MKNSRTQVAGITARLQPPEWAIFMVAVIADLVSAAGLLPAERLSLFRGLAVFLLYREWALAFACGFVLPRVVPLIAVCFLKQKWRAFNASAQERLNALVATANECAGLSTNVPQAGMGGNTSAHRESRHTQEGEVSGYDVSSVSGEEVVELSSWAAETTSVGHGNSSSSGARVRQRNPLR 257
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1058.416.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M R N S R T A V A G S T A R L Q P P E W A I F M V A V I A D L V S A A G L L P V E R L S L F R G L A V F L L Y R E W A L A F A C G F V L P R V V P L I A V C F L K Q K W R A F K A S A Q E R L N A V A A T A N E R A G V S T N V P H A G M G G N I S A H R N S R H T Q E G E V S G Y D V S S V S G E E V V E L S S W A A E T T S V G H D N S S S R G A R V R Q R N P L R * 20 40 60 80 100 120 140 160 180 Expect = 7.13e-110 / Id = 93.89 Expect = 9.34e-105 / Id = 92.22 Sequence A0A6H5JGG0_9PHAE D7G7L1_ECTSI
Match Name E-value Identity Description
A0A6H5JGG0_9PHAE 7.130e-110 93.89 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7G7L1_ECTSI 9.340e-105 92.22 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M R N S R T A V A G S T A R L Q P P E W A I F M V A V I A D L V S A A G L L P V E R L S L F R G L A V F L L Y R E W A L A F A C G F V L P R V V P L I A V C F L K Q K W R A F K A S A Q E R L N A V A A T A N E R A G V S T N V P H A G M G G N I S A H R N S R H T Q E G E V S G Y D V S S V S G E E V V E L S S W A A E T T S V G H D N S S S R G A R V R Q R N P L R * 20 40 60 80 100 120 140 160 180 Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 20..38 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 39..57 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 58..80 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..19 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 81..180 None No IPR available TMHMM TMhelix coord: 21..43 None No IPR available TMHMM TMhelix coord: 58..80
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1058.416.1 ID=prot_E-siliculosus-1a_F_contig1058.416.1|Name=mRNA_E-siliculosus-1a_F_contig1058.416.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=181bp back to top