Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1054.392.1 vs. uniprot
Match:
D8LLS8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLS8_ECTSI)
HSP 1 Score: 283 bits (725), Expect = 3.020e-96
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = 0
Query: 1 MGSPRLAAPRSRASTVLALPLLAAALVLVCASLLPAGAVAMGPNDDGAANNLGLLAQACATSFCGLGVDALDLWLSLEEVCRTDASNQPSLEAGDEMEFGGVHAGGWGTAAAEGG-RGGDWSASSTALVCGGVLAVSALVGFRSGIKVGTWTKEGYPVA 158
MGSPRLAAP+SRASTVLALPLLAAALVLVCASLLPAGA AMGPNDDGAANNLGLLAQACA+SFCGLGVDALDLWLSLEEVCRT ASNQPSLE G EMEFGGVH GGWGTAAAEGG RGGDWSASSTALVCGGVLAVSALVGFRSGIKVGTWTKEGYPVA
Sbjct: 1 MGSPRLAAPQSRASTVLALPLLAAALVLVCASLLPAGAEAMGPNDDGAANNLGLLAQACASSFCGLGVDALDLWLSLEEVCRTGASNQPSLEGGGEMEFGGVHGGGWGTAAAEGGGRGGDWSASSTALVCGGVLAVSALVGFRSGIKVGTWTKEGYPVA 159
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1054.392.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 1
M G S P R L A A P R S R A S T V L A L P L L A A A L V L V C A S L L P A G A V A M G P N D D G A A N N L G L L A Q A C A T S F C G L G V D A L D L W L S L E E V C R T D A S N Q P S L E A G D E M E F G G V H A G G W G T A A A E G G R G G D W S A S S T A L V C G G V L A V S A L V G F R S G I K V G T W T K E G Y P V A * 20 40 60 80 100 120 140 Expect = 3.02e-96 / Id = 94.97 Sequence D8LLS8_ECTSI
Match Name E-value Identity Description
D8LLS8_ECTSI 3.020e-96 94.97 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M G S P R L A A P R S R A S T V L A L P L L A A A L V L V C A S L L P A G A V A M G P N D D G A A N N L G L L A Q A C A T S F C G L G V D A L D L W L S L E E V C R T D A S N Q P S L E A G D E M E F G G V H A G G W G T A A A E G G R G G D W S A S S T A L V C G G V L A V S A L V G F R S G I K V G T W T K E G Y P V A * 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Score = 0.783 Score = Score = Sequence SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_N_REGION SignalP-noTM TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..40 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 35..40 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 16..34 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 41..158 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..15 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..40 None No IPR available TMHMM TMhelix coord: 13..35 None No IPR available TMHMM TMhelix coord: 120..142
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1054.392.1 ID=prot_E-siliculosus-1a_F_contig1054.392.1|Name=mRNA_E-siliculosus-1a_F_contig1054.392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=159bp back to top