Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1052.376.1 vs. uniprot
Match:
A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE)
HSP 1 Score: 159 bits (401), Expect = 1.520e-39
Identity = 224/281 (79.72%), Postives = 229/281 (81.49%), Query Frame = 0
Query: 7 MRLLGGPKLQRERSNVSTWDWSESGWDEEAKSG-DEXXXXXXXXXXXXXXXXGRRMSRTRPLPQAMNPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSPLTLSVGVGVSGAPRVLQSPRRLLCGRRSXXXXXXXXXXXXXXXXXXXXXXAGWRGTMREMRGFLLWMAVILAHMVQVPMLWFVFWQY 286
MRLLGGPKLQR++S+ STWDWSE+GWDEEA SG +E XXXXXXXX GRRMSRTRPL QAMNPH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX RQSPLTLSVGVGVSGAPRVLQSPRRLLCGRRSXXXXXXXXXXXXXXXX GWRGTMREMRGFLLWMAVILAHMVQVPMLWFVFWQY
Sbjct: 1 MRLLGGPKLQRDQSHASTWDWSENGWDEEANSGYEEESRTLPQXXXXXXXXQGRRMSRTRPLSQAMNPHREELLMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSNGXXXXXXXXXXXXXXXXXXWASSETLCGXXXXXXXXXXXXXXXXXXXXXXXSNMSSQAEGQQ--RQSPLTLSVGVGVSGAPRVLQSPRRLLCGRRSXXXXXXXXXXXXXXXX------GGWRGTMREMRGFLLWMAVILAHMVQVPMLWFVFWQY 273
BLAST of mRNA_E-siliculosus-1a_F_contig1052.376.1 vs. uniprot
Match:
D8LG44_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG44_ECTSI)
HSP 1 Score: 65.1 bits (157), Expect = 9.420e-9
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 256 MREMRGFLLWMAVILAHMVQVPMLWFVFWQ 285
MREMRGFLLWMAVILAHMVQVPMLWFVFWQ
Sbjct: 1 MREMRGFLLWMAVILAHMVQVPMLWFVFWQ 30
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1052.376.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M G T D V E M R L L G G P K L Q R E R S N V S T W D W S E S G W D E E A K S G D E E E S R T L T Q Q Q Q K Q Q Q Q G R R M S R T R P L P Q A M N P H H E E L L M P E E Q Q W R Q Q H H R Q R T R Q D D E E Q G D N D P P P V K G S S S S G G G G G S S S G S N N N N L S N G G G S G N G S G S S S S S R R W R R W A S S E A L C G C N N E E S R A R K K R Q Q L L Q L Q Q Q R R S T N S S Q A E E Q Q R Q S P L T L S V G V G V S G A P R V L Q S P R R L L C G R R S S N H N N N S G V G G G G G G G G G G S A A A G W R G T M R E M R G F L L W M A V I L A H M V Q V P M L W F V F W Q Y T Y L F F L E M A W C G P E D F G T L E L L Q L Y S I Q H R E N G E A V S S Q S W G W C T G T F F Q T Q V V A * 50 100 150 200 250 300 Expect = 1.52e-39 / Id = 79.72 Expect = 9.42e-9 / Id = 100.00 Sequence A0A6H5J947_9PHAE D8LG44_ECTSI
Match Name E-value Identity Description
A0A6H5J947_9PHAE 1.520e-39 79.72 PAP2_C domain-containing protein n=1 Tax=Ectocarpu... [more] D8LG44_ECTSI 9.420e-9 100.00 PAP2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M G T D V E M R L L G G P K L Q R E R S N V S T W D W S E S G W D E E A K S G D E E E S R T L T Q Q Q Q K Q Q Q Q G R R M S R T R P L P Q A M N P H H E E L L M P E E Q Q W R Q Q H H R Q R T R Q D D E E Q G D N D P P P V K G S S S S G G G G G S S S G S N N N N L S N G G G S G N G S G S S S S S R R W R R W A S S E A L C G C N N E E S R A R K K R Q Q L L Q L Q Q Q R R S T N S S Q A E E Q Q R Q S P L T L S V G V G V S G A P R V L Q S P R R L L C G R R S S N H N N N S G V G G G G G G G G G G S A A A G W R G T M R E M R G F L L W M A V I L A H M V Q V P M L W F V F W Q Y T Y L F F L E M A W C G P E D F G T L E L L Q L Y S I Q H R E N G E A V S S Q S W G W C T G T F F Q T Q V V A * 50 100 150 200 250 300 Score = Score = Score = Score = Score = Sequence Coil NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 162..182 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 285..341 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 262..284 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..261 None No IPR available TMHMM TMhelix coord: 262..284
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1052.376.1 ID=prot_E-siliculosus-1a_F_contig1052.376.1|Name=mRNA_E-siliculosus-1a_F_contig1052.376.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=342bp back to top