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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1045.328.1 vs. uniprot
Match: D7FPN8_ECTSI (RecG-like helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN8_ECTSI) HSP 1 Score: 200 bits (509), Expect = 2.000e-59 Identity = 119/159 (74.84%), Postives = 124/159 (77.99%), Query Frame = 0 Query: 29 MRTAAAARGALLALXXXLLGEGALGSCSRFGGREGGXXXXXXXXXXXXXXXXXXXXXXXSSRASFVGAGSMLGRHAWRTAAARRVLTKPNFGLSRLQTIGSGAPKHGSSASTVAARELRRETSSSGNNASDELAATGTGGDGTAAARGGKKGSGPRQAR 187
MRTAAAARGALLAL LLGEGALG+CSRFGGREGG SSRASFVGAGSMLG HAWRTAAARRVLT+PNFGLSRLQT+GSGAP GSS STVAARELRRETSSSGNNASD+ A GTG DGT+A RGGKKGSGPRQAR
Sbjct: 1 MRTAAAARGALLALLLSLLGEGALGTCSRFGGREGGRKSHQLVCNQQPNSSATTAASTTSSRASFVGAGSMLGLHAWRTAAARRVLTRPNFGLSRLQTVGSGAPTRGSSTSTVAARELRRETSSSGNNASDDFADKGTG-DGTSATRGGKKGSGPRQAR 158
BLAST of mRNA_E-siliculosus-1a_F_contig1045.328.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE) HSP 1 Score: 137 bits (345), Expect = 4.450e-34 Identity = 78/89 (87.64%), Postives = 80/89 (89.89%), Query Frame = 0 Query: 99 MLGRHAWRTAAARRVLTKPNFGLSRLQTIGSGAPKHGSSASTVAARELRRETSSSGNNASDELAATGTGGDGTAAARGGKKGSGPRQAR 187
MLGRHAWRT AARRVLT+PNFGL RLQT+GSGAPK GSS STVAARELRRETSSSGNNASDE AATGTG GTAA R GKKGSGPRQAR
Sbjct: 1 MLGRHAWRTTAARRVLTRPNFGLYRLQTVGSGAPKRGSSTSTVAARELRRETSSSGNNASDEFAATGTG-YGTAATRDGKKGSGPRQAR 88
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1045.328.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match Name | E-value | Identity | Description | |
D7FPN8_ECTSI | 2.000e-59 | 74.84 | RecG-like helicase n=1 Tax=Ectocarpus siliculosus ... | [more] |
A0A6H5JXY9_9PHAE | 4.450e-34 | 87.64 | ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 33..52 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 53..187 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..32 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1045.328.1 ID=prot_E-siliculosus-1a_F_contig1045.328.1|Name=mRNA_E-siliculosus-1a_F_contig1045.328.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=187bp CIRTQSVAGLSFWGQLLSSGPCVPASKLMRTAAAARGALLALLLLLLGEG ALGSCSRFGGREGGGKSHHLVCNQQPHSSATTATSTTSSRASFVGAGSML GRHAWRTAAARRVLTKPNFGLSRLQTIGSGAPKHGSSASTVAARELRRET SSSGNNASDELAATGTGGDGTAAARGGKKGSGPRQAR back to top
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