prot_E-siliculosus-1a_F_contig10355.280.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig10355.280.1
Unique Name	prot_E-siliculosus-1a_F_contig10355.280.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	120

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot
Match: A0A6H5L505_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L505_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 9.640e-21
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0

Query:   59 EESDLRSPTGARRAPGFQETPEHQPSGVTAEASVVADKDALADELGQEVKRLREQGRELEA 119
            EESDLRSPTGAR APGFQETP+ Q SGVTA+ASVVADKD LADELGQEVKRLREQ RELEA
Sbjct: 1066 EESDLRSPTGARHAPGFQETPKQQLSGVTAKASVVADKDTLADELGQEVKRLREQLRELEA 1126

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1

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POSITION

0


Match Name	E-value	Identity	Description
A0A6H5L505_9PHAE	9.640e-21	88.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29

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x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..120
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..33
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.585
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig10355	contig	E-siliculosus-1a_F_contig10355:168..1980 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig10355.280.1	mRNA_E-siliculosus-1a_F_contig10355.280.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig10355 168..1980 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10355.280.1 ID=prot_E-siliculosus-1a_F_contig10355.280.1|Name=mRNA_E-siliculosus-1a_F_contig10355.280.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=120bp
CQSIGGCLHTFALFLVVGHFSSHMLITPPAAIRTTCRPQGTPSFQTPSLE
DARGCKAGEESDLRSPTGARRAPGFQETPEHQPSGVTAEASVVADKDALA
DELGQEVKRLREQGRELEAE