Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR012670 | Type III secretion system, YscI/HrpB | PFAM | PF17001 | T3SS_basalb_I | coord: 9..106
e-value: 1.1E-11
score: 45.2 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig10128.137.1 ID=prot_E-siliculosus-1a_F_contig10128.137.1|Name=mRNA_E-siliculosus-1a_F_contig10128.137.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=107bp
SINTAPNQADVDLFQSSFNQASNGATSLDGNGISGFLSEKLNQYTSSFGE
LSLMNNKNLLAAAANPTPMNILEANRTLSEFSLKGQLMAKTISQGVRALD
KLTTLQ* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012670 | T3SS_YscI/HrpB |
|