prot_E-siliculosus-1a_F_contig10056.98.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10056.98.1
Unique Nameprot_E-siliculosus-1a_F_contig10056.98.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length93
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10056.98.1 vs. uniprot
Match: A0A6H5JA50_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.150e-38
Identity = 62/93 (66.67%), Postives = 79/93 (84.95%), Query Frame = 0 
Query:    1 FRKLVQALYGSTYMFRPKNTGPYIDPCERVAVFLFRVGGGHGVRGTAAHFDISEGSVVDWTLKVAKLIVKRLQSQYVRWPRPEEQALMASEWE 93
            FR+LV AL+G+TY+FR  NTGPYIDPCERVAVFLFRVG G GVR TA+HF+++EG+VV+WT+ VA+ I KRL  +YVRWP PEEQ+ +++ WE
Sbjct:   15 FRRLVHALFGTTYVFRVNNTGPYIDPCERVAVFLFRVGHGSGVRATASHFNMAEGAVVNWTMSVARRIRKRLLCEYVRWPSPEEQSEISTAWE 107
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BLAST of mRNA_E-siliculosus-1a_F_contig10056.98.1 vs. uniprot
Match: A0A6H5JSG7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.570e-15
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0 
Query:   14 MFRPKNTGPYIDPCERVAVFLFRVGGGHGVRGTAAHFDISEGSVVDWTLKVAKLIVKRLQSQYVRWPRPEEQALMASEWE 93
            M R    GP  DPCERVAVF++R+GG   VR TA  F +S+G+V   TL+VA+ + K L+ + V WP PEEQ  M++ WE
Sbjct:    1 MCRKGRRGPPFDPCERVAVFMWRLGGDSTVRQTALQFGLSDGTVSQVTLEVARRVDKYLRDECVWWPSPEEQRDMSAAWE 80
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10056.98.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA50_9PHAE3.150e-3866.67DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JSG7_9PHAE1.570e-1550.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10056contigE-siliculosus-1a_F_contig10056:2205..2483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10056.98.1mRNA_E-siliculosus-1a_F_contig10056.98.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10056 2205..2483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10056.98.1 ID=prot_E-siliculosus-1a_F_contig10056.98.1|Name=mRNA_E-siliculosus-1a_F_contig10056.98.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=93bp
FRKLVQALYGSTYMFRPKNTGPYIDPCERVAVFLFRVGGGHGVRGTAAHF
DISEGSVVDWTLKVAKLIVKRLQSQYVRWPRPEEQALMASEWE
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