Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10010.75.1 vs. uniprot
Match:
A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)
HSP 1 Score: 213 bits (541), Expect = 4.320e-60
Identity = 141/194 (72.68%), Postives = 141/194 (72.68%), Query Frame = 0
Query: 1 RLSQTFLPDDAVSCLHIQGGGRMVAEVTVVLTSCTGQASVGELDNLVEVTKSTACPRRVHFAAVSKKDRSTPPFPLVRAAPPLFQALDAVLNRESEAEQATYKASLGVQPGSALAAAAKNAAEEAAKTRRQAKQARDAERLRLEIVQIAEARRVEQRKEEEKXXXXXXXXXXXXXXXXNLREGEAQGGGMGAGR 194
RLSQTFL DDAVSCLHIQGGGRMVAE TVVLTSCTGQASVGELDNLVEVTKSTACPR VHFAAVSKKDRSTPPFPLVRAAPPLFQAL AKQARDAERLRLEIVQIAEARRVEQRKEE XXXXXXXXXXXXX NLREGEAQGGGMG GR
Sbjct: 162 RLSQTFLADDAVSCLHIQGGGRMVAEATVVLTSCTGQASVGELDNLVEVTKSTACPRGVHFAAVSKKDRSTPPFPLVRAAPPLFQAL--------------------------------------------AKQARDAERLRLEIVQIAEARRVEQRKEEXXXXXXXXXXXXXXXESENLREGEAQGGGMGVGR 311
BLAST of mRNA_E-siliculosus-1a_F_contig10010.75.1 vs. uniprot
Match:
A0A6H5JP78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP78_9PHAE)
HSP 1 Score: 157 bits (398), Expect = 9.010e-42
Identity = 103/188 (54.79%), Postives = 115/188 (61.17%), Query Frame = 0
Query: 1 RLSQTFLPDDAVSCLHIQGGGRMVAEVTVVLTSCTGQASVGELDNLVEVTKSTACPRRVHFAAVSKKDRSTPPFPLVRAAPPLFQALDAVLNRES------------------------------EAEQATYKASLGVQPGSALAAAAKNAAEEAAKTRRQAKQARDAERLRLEIVQIAEARRVEQRK 158
R SQTFLP DAVS L + GG R V E TV+LTS QAS GELDNLVEVTK+T C FAAVSKKDRSTPPFPLVRAAPPLFQA V R EAEQA +KASLGVQPG AAAA AAEEAA RRQA++ + E +LE+ ++A AR+ QRK
Sbjct: 127 RHSQTFLPGDAVSSLRVGGGDRTVTEATVILTSSCTQASAGELDNLVEVTKATTCCTGCQFAAVSKKDRSTPPFPLVRAAPPLFQAWYQVPRRACCWVCARDDARMQLIFFAADPCDPPIPGAGREAEQAAHKASLGVQPGWEAAAAATRAAEEAAIARRQARKIKAVENRQLELAELANARQHAQRK 314
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10010.75.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
R L S Q T F L P D D A V S C L H I Q G G G R M V A E V T V V L T S C T G Q A S V G E L D N L V E V T K S T A C P R R V H F A A V S K K D R S T P P F P L V R A A P P L F Q A L D A V L N R E S E A E Q A T Y K A S L G V Q P G S A L A A A A K N A A E E A A K T R R Q A K Q A R D A E R L R L E I V Q I A E A R R V E Q R K E E E K E K R R K D D E E K R R K E S E N L R E G E A Q G G G M G A G R G E A A G Q G V E A G K Q 20 40 60 80 100 120 140 160 180 200 Expect = 4.32e-60 / Id = 72.68 Expect = 9.01e-42 / Id = 54.79 Sequence A0A6H5K454_9PHAE A0A6H5JP78_9PHAE back to top
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
R L S Q T F L P D D A V S C L H I Q G G G R M V A E V T V V L T S C T G Q A S V G E L D N L V E V T K S T A C P R R V H F A A V S K K D R S T P P F P L V R A A P P L F Q A L D A V L N R E S E A E Q A T Y K A S L G V Q P G S A L A A A A K N A A E E A A K T R R Q A K Q A R D A E R L R L E I V Q I A E A R R V E Q R K E E E K E K R R K D D E E K R R K E S E N L R E G E A Q G G G M G A G R G E A A G Q G V E A G K Q 20 40 60 80 100 120 140 160 180 200 Score = Score = Sequence Coil Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 146..186 None No IPR available COILS Coil Coil coord: 115..138
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig10010.75.1 ID=prot_E-siliculosus-1a_F_contig10010.75.1|Name=mRNA_E-siliculosus-1a_F_contig10010.75.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp back to top