mRNA_E-siliculosus-1a_F_contig1703.3931.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 281 bits (720), Expect = 1.160e-84 Identity = 138/216 (63.89%), Postives = 172/216 (79.63%), Query Frame = 1
Query: 4 SWKAGVYMEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGANFISTSS 651
S +A ++ + +GDL+ S+DL +T+FWSD M GE L+ P GAVR ++W+KAA+VVH LSEAA TSPGDICSWN V V H D+LLVSGLDHLL+SGRGAGG GGE+AEL +ACFMGL+SFLA + +VLRV+ + LNA ARAN+QSAT+TDTPLTDAGLDGTGQV+Q+ID+G+DESSCFF HD++GDH+ HG+YF+E G N TSS
Sbjct: 192 SVEAEAFISDTLGDLMLASVDLHSTNFWSDQNMGGGEQLSFPGGAVRARDWSKAASVVHELSEAAGTSPGDICSWNRVSVHHAEGDVLLVSGLDHLLHSGRGAGGRSDGGESAELHIACFMGLVSFLASKPEVLRVAPRQSQALLNASARANIQSATVTDTPLTDAGLDGTGQVVQVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPPLTSS 407
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 273 bits (699), Expect = 3.540e-82 Identity = 139/221 (62.90%), Postives = 175/221 (79.19%), Query Frame = 1
Query: 4 SWKAGVYMEELVGDLLSESIDLRATSFWSDPAM-AEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGANFISTSSFGDD 663
S +A ++ ++GDL+S S+DL +T+FWSDP M GEHL++P GAVR ++W KAA+VVH LSEAAST PGDICSWN + V H GDD LLVSGLDHLL+SGRGAGG+ + E+ EL VACFMGL+SFLAGR +VLRVS T LNA AR +QSA+ TDTPLTDAGLDGTG++IQ+ID+GLDE+SC+F+ DD+G+ + HGYYFDELG + +SS+ D
Sbjct: 199 SSEAKSFINHMLGDLMSASVDLHSTNFWSDPGMDGAGEHLSSPAGAVRARDWRKAASVVHELSEAASTGPGDICSWNRIFVHHAGDDSLLVSGLDHLLFSGRGAGGSHEE-ESTELHVACFMGLVSFLAGRPEVLRVSPRPTKRVLNAAARGVIQSASATDTPLTDAGLDGTGEIIQVIDSGLDETSCYFI-DDSGEEVDHGYYFDELGRAAVYSSSYSSD 417
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 263 bits (673), Expect = 2.490e-78 Identity = 130/201 (64.68%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 22 YMEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDEL 624
++ +L+GDL+S S+DL +T+FWSDP MA GEHL++ GAVR ++W+KAA+VVH LSEAA TSPGDICSW+ V ++ GDD LLV+GLDHLL+SGRGAGG+ + E+ EL VACFMGL+SF AGR +VLRVS HT LN AR +QSA+ TDTPLTDAGLDGTG+VIQ++DTGLDE+SCFF+ DD G+ + HGY+F+EL
Sbjct: 208 FIIDLLGDLMSASVDLHSTNFWSDPVMAGGEHLSSHGGAVRARDWSKAASVVHELSEAAGTSPGDICSWDEVALIQAGDDSLLVTGLDHLLFSGRGAGGSHEE-ESTELHVACFMGLVSFFAGRPEVLRVSPRHTKRVLNEAARGIIQSASATDTPLTDAGLDGTGEVIQVVDTGLDETSCFFI-DDGGEEVDHGYFFEEL 406
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 254 bits (648), Expect = 2.320e-75 Identity = 131/218 (60.09%), Postives = 167/218 (76.61%), Query Frame = 1
Query: 10 KAGVYMEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGANFISTSSFGDD 663
+AG+++ EL+ DL+S+SIDL + WSDP A GEHL TP GAVR +EW+ AA +VH L+ A TSPGDICSW+++ + + G+DLLLVSGLDHLL+ GA G+ + EA ELRVACFMGL+SFL+ R++VLRVS H LNA AR +QSATIT+ PLTDAGLDGTGQVIQ+IDTGLDE+SCFF+ DD G+ + HG+Y++ LG S+SS DD
Sbjct: 201 EAGMFIAELLDDLMSDSIDLHGGNVWSDPVAANGEHLTTPAGAVRKREWSMAATLVHQLAVAGRTSPGDICSWDSISMHYAGNDLLLVSGLDHLLHKENGAIGSDE--EATELRVACFMGLVSFLSNRLEVLRVSPRHADRLLNAVARTIIQSATITEAPLTDAGLDGTGQVIQVIDTGLDETSCFFIDDD-GEEVPHGHYYEALGEIIPSSSSARDD 415
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: D7G6L6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L6_ECTSI) HSP 1 Score: 206 bits (525), Expect = 1.720e-62 Identity = 115/219 (52.51%), Postives = 147/219 (67.12%), Query Frame = 1
Query: 49 LSESIDLRATSFWS--------DPAMAEG--EHLATPQGAVRGKEWNKAAAVVHGLSEA-ASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGANFISTSSFGDDWSF 672
+SES+D+ SFWS D A AEG + L G V +EW +AA V+ GL A + GD+CSW+ + V+H DDLL + G+DHLL GRGAGG +G EA EL+VACFM LLSFLA R +VLRVS LNA A NVQSA +T++P+TDAGLDGTG+VIQI+DTGLD +SCFFV +D G+ +AHG+YF+E+G + SS+ W F
Sbjct: 1 MSESLDVHGKSFWSSGWSAKLLDEAAAEGAGDSLGGGPGEVLAREWTRAADVLRGLGGAEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGN-EGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDF 218
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI) HSP 1 Score: 206 bits (525), Expect = 3.100e-59 Identity = 115/219 (52.51%), Postives = 147/219 (67.12%), Query Frame = 1
Query: 49 LSESIDLRATSFWS--------DPAMAEG--EHLATPQGAVRGKEWNKAAAVVHGLSEA-ASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGANFISTSSFGDDWSF 672
+SES+D+ SFWS D A AEG + L G V +EW +AA V+ GL A + GD+CSW+ + V+H DDLL + G+DHLL GRGAGG +G EA EL+VACFM LLSFLA R +VLRVS LNA A NVQSA +T++P+TDAGLDGTG+VIQI+DTGLD +SCFFV +D G+ +AHG+YF+E+G + SS+ W F
Sbjct: 1 MSESLDVHGKSFWSSGWSAKLLDEAAAEGAGDSLGGGPGEVLAREWTRAADVLRGLGGAEGGPTIGDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGN-EGPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDF 218
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 207 bits (528), Expect = 5.440e-58 Identity = 110/215 (51.16%), Postives = 152/215 (70.70%), Query Frame = 1
Query: 10 KAGVYMEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGA-NFISTSS 651
KA +++EL+ L S S+DL A + WSD M G+HL + GA+RG+EW++AA +V+ SE+ +P +C W V V H +D+LLV+GLDHLLY GR G + EAAELR+AC+MGL+SFLA R +VL+V+ + + LNA ARA +QSA++ TPLTDAGLDG+G+VIQIID G++E++CF H D G + HGYYFD + + N + TSS
Sbjct: 199 KAHEFIQELLKSLSSPSLDLHAITCWSDLVMKGGDHLFSAAGALRGREWSRAATLVNERSESEQETPSQVCGWEQVVVHHAANDVLLVAGLDHLLYDGREVSGASEE-EAAELRMACYMGLVSFLASRHEVLKVAGWNRKVNLNAAARATIQSASVDSTPLTDAGLDGSGEVIQIIDAGVNETTCFLEHGD-GTEVEHGYYFDFVASSNPLFTSS 411
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA) HSP 1 Score: 206 bits (525), Expect = 1.040e-57 Identity = 107/176 (60.80%), Postives = 133/176 (75.57%), Query Frame = 1
Query: 10 KAGVYMEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQII 537
+AG+++ EL+ DL+S+SIDL + WSDP A GEHL TP GAVR +EW+ AA +VH L+ A TSPGDICSW+++ + H G+DLLLVSGLDHLL+ GA G+ + EA ELRVACFMGL+SFL+ R++V RVS H LNA AR +QSATIT PLT AGLDGTGQVIQ+I
Sbjct: 201 QAGMFIAELLDDLMSDSIDLHGGNVWSDPVAANGEHLTTPAGAVRKREWSMAATLVHQLAVAGRTSPGDICSWDSISIHHAGNDLLLVSGLDHLLHKESGAIGSDE--EATELRVACFMGLVSFLSSRLEVSRVSPRHADRLLNAVARTIIQSATITKAPLTAAGLDGTGQVIQVI 374
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.720e-57 Identity = 118/232 (50.86%), Postives = 153/232 (65.95%), Query Frame = 1
Query: 13 AGVYMEELVGDLLSESIDLRATSFWS--------DPAMAEG--EHLATPQGAVRGKEWNKAAAVVHGL--SEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFDELGANFISTSSFGDDWSF 672
+G +E +L+S+S+D+ SFWS D A AEG + G V +EW +AA V+ GL +E T GD+CSW+ + V+H DDLL + G+DHLL GRGAGG +G EA EL+VACFM LLSFLA R +VLRVS LNA A NVQSA++T++P+TDAGLDGTG+VIQI+DTGLD +SCFFV +D G+ +AHGYYF+E+G S S+ W F
Sbjct: 253 SGELTDEWREELMSQSLDVHDKSFWSSGWSAKLPDEAAAEGAGDSSGGGPGEVLAREWTRAADVLRGLGGTEGGPTI-GDVCSWDGLVVVHTDDDLLTMKGMDHLLPEGRGAGGN-EGPEADELKVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSASLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGYYFEEIGVEASSFGSWFTSWDF 482
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 168 bits (426), Expect = 3.900e-44 Identity = 95/202 (47.03%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 13 AGVYMEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVVHGLSEAASTSPGDICSWNNVRVLHVGDDLLLVSGLDHLLYSGRGAGGTWKGGEAAELRVACFMGLLSFLAGRIDVLRVSSTHTYLPLNAEARANVQSATITDTPLTDAGLDGTGQVIQIIDTGLDESSCFFVHDDTGDHIAHGYYFD 618
A ++ + DL SES+++R SFWSD E+ T R +EW++AAAVV GL+ ++ + G+IC + +++ HV DDL+LV G++HLL R +E R AC+MGLLS LA + +VLRVS + NA A A VQSAT T+TPL DAGLDGTG+VIQ++D+GLDE+SCFF DD G + HG+ FD
Sbjct: 194 AEAFLRDWHADLTSESVNMRRASFWSDSDADRSEYDVT-----RVREWSRAAAVVDGLASKSARTVGEICGFGKLKLRHVADDLVLVEGMNHLLPGKR---------FPSETRTACYMGLLSQLAAKPEVLRVSPLQSARLHNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDSGLDETSCFFADDD-GLQVEHGFLFD 380 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1703.3931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1703.3931.1 >prot_E-siliculosus-1a_F_contig1703.3931.1 ID=prot_E-siliculosus-1a_F_contig1703.3931.1|Name=mRNA_E-siliculosus-1a_F_contig1703.3931.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=235bp MEELVGDLLSESIDLRATSFWSDPAMAEGEHLATPQGAVRGKEWNKAAAVback to top mRNA from alignment at E-siliculosus-1a_F_contig1703:5851..7182- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1703.3931.1 ID=mRNA_E-siliculosus-1a_F_contig1703.3931.1|Name=mRNA_E-siliculosus-1a_F_contig1703.3931.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1332bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1703:5851..7182- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1703:5851..7182- >mRNA_E-siliculosus-1a_F_contig1703.3931.1 ID=mRNA_E-siliculosus-1a_F_contig1703.3931.1|Name=mRNA_E-siliculosus-1a_F_contig1703.3931.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1410bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1703:5851..7182- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |