mRNA_E-siliculosus-1a_F_contig170.3912.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig170.3912.1
Unique NamemRNA_E-siliculosus-1a_F_contig170.3912.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: D8LJ83_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ83_ECTSI)

HSP 1 Score: 546 bits (1406), Expect = 8.380e-196
Identity = 256/266 (96.24%), Postives = 261/266 (98.12%), Query Frame = 1
Query:  121 MPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITPEEFAKFTCK 918
            MPLYETQWEEYLKEKKTQVGGRIFEHT KHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDW+AIAQQ+CEKHL SSQCPLVFMDISLDPS+RPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNE GVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEG+TLNQRP MECKVHKCGQITPE+FAK TCK
Sbjct:    1 MPLYETQWEEYLKEKKTQVGGRIFEHTEKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWVAIAQQQCEKHLTSSQCPLVFMDISLDPSARPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNETGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITPEDFAKLTCK 266          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: A0A7S2V0W8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W8_9STRA)

HSP 1 Score: 241 bits (615), Expect = 4.730e-75
Identity = 131/300 (43.67%), Postives = 178/300 (59.33%), Query Frame = 1
Query:   16 NGIVVVGCVSDASFHRCCRLVRVLNDSGISARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGG--RTYMGGIEELIRFAEATV---APPFDRSEGD-----NTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQI 885
            + ++V G + D ++H C   +        S  V    L + +W  +L E+K + GG +      ++V+ DG   R Y+G   EL  +A+      APP    E +      ++ + +   R   H A       +MDI    +S PQRV FQL+S  CP TCENFR LC G + M      L YKGSPFHRVV+ GWVQGGDI+SG+GDGG SIYGE F DE+FA++ N  G+LAMAN GPHTNGSQF +TL P PWLN++ V FGRV +G++++R M+  +T NQRP M+C V  CG+I
Sbjct:   14 SALIVAGRIDDPTYHLCRHFLMDFMSEIDSIAVEECGLLQLEWYAFLDERKKEFGGVVLAPGDPYMVILDGPKERQYLGRERELRVWAKKEFDYEAPPAKGLENEIAAKYESEHLYLTAIRDAGHKAC------YMDIKTG-NSDPQRVEFQLFSDICPKTCENFRVLCEGNRQM------LQYKGSPFHRVVKGGWVQGGDIISGSGDGGISIYGETFPDETFAVEFNTEGILAMANAGPHTNGSQFFITLGPLPWLNNRAVAFGRVARGMEIIRGMNNMETENQRPKMDCTVVDCGEI 300          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: A0A452HTC7_9SAUR (Peptidyl-prolyl cis-trans isomerase n=14 Tax=Cryptodira TaxID=8464 RepID=A0A452HTC7_9SAUR)

HSP 1 Score: 232 bits (592), Expect = 1.020e-71
Identity = 121/296 (40.88%), Postives = 180/296 (60.81%), Query Frame = 1
Query:   22 IVVVGCVSDASFH--RCCRLVRVLNDSGISARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWIA----IAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITP 891
            +VVVG + +  FH  +C      LN     A    +PL E  W EYL+EKK ++ G  +E+ +  +   DG    +G  +EL+ +A       +D+    +   +A    I +  C KH+ +S+   V++DI++        ++F+LYS  CP TC NFR+LCTGE G S +G +L YK S FHR+V++GW+QGGDI +G GDGG SIYG  F DE+F+I  N+ G+L MAN G H+NGSQF +TL P P+++ K V FG++I+G +VL+++ +  T N+RP +ECK+  CG   P
Sbjct:    9 LVVVGLLKEPVFHMAKCTAEALRLNFPNKIAEPVVLPLLEFAWHEYLQEKKKELKGETWEYPSSVMCFIDG--QLLGSEQELLTWA-------YDKWNYQDFKPVALYQAITEDFCTKHMQNSKHMFVYLDIAIQEQPTGT-LLFELYSDMCPKTCANFRSLCTGEAGTSHSGMELTYKESVFHRLVKNGWIQGGDIAAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGQLIEGTEVLQKLEDVSTYNERPVVECKIINCGVFVP 294          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: A0A087YNR3_POEFO (Peptidyl-prolyl cis-trans isomerase n=14 Tax=Poeciliinae TaxID=586240 RepID=A0A087YNR3_POEFO)

HSP 1 Score: 229 bits (585), Expect = 1.120e-70
Identity = 125/295 (42.37%), Postives = 177/295 (60.00%), Query Frame = 1
Query:   22 IVVVGCVSDASFHRCCRLVRVLNDSGISARVTSM--PLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEA----TVAPPFDRSEGDNTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGT-GDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQI 885
            I +VG + D +FH    +   L        +  +  PL E  W EYL +KK ++ G ++E+ +  +   +G    +G  ++L  +AE     T+A P D        + AI ++   KHL  +    VF+D+ +     P+R+ F+L+S  CP T ENF ALCTGE+G+S +G  L+YKGS FHR+V +GWVQGGDI   + GDGG SIYG  F DESFAI  ++ G L MAN GPHTNGSQF +TL P PW++   V FGRVI+G++VL+++ E  T N+RP  EC+V  CG +
Sbjct:    7 IEIVGVIKDPNFHAARSIAEGLKQQFPDDLLDPVIVPLLEFDWHEYLCKKKRELRGDVWEYPSNVICFLNG--VLLGNEKQLASWAENQWNFTLAHPEDF-------YTAITEEYYAKHLQKTGHKFVFLDVVV-AGEDPRRICFELFSDVCPKTSENFEALCTGERGLSESGLPLHYKGSLFHRIVPNGWVQGGDISPNSRGDGGESIYGPTFEDESFAISHSKRGTLGMANKGPHTNGSQFYITLQPAPWMDKTYVAFGRVIEGVEVLKKLEESKTSNERPKYECRVSACGVL 291          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: UPI000EA9FB60 (problable inactive peptidyl-prolyl cis-trans isomerase-like 6 n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=UPI000EA9FB60)

HSP 1 Score: 228 bits (581), Expect = 5.720e-70
Identity = 123/293 (41.98%), Postives = 178/293 (60.75%), Query Frame = 1
Query:   22 IVVVGCVSDASFHRCCRLVRVL--NDSGISARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTD-WIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITP 891
            + VVG +++ SFH     V  L  N     A    +PL +  W+EYL+EKK ++ G I+E+ +  +   DG    +G  + L+++A       +D  +   T  + AI      K+L + Q   VFM+I++   S   +++F+LYS  CP TC NF+ LCTGEKG S +G  L YK S FHR+V++GW+QGGDI  G G+GG SIYG VF DESFA+  ++ GVL M N G HTNGSQF +TL P P+LN K V FG++I+G +VL+E+   +T N+RP ++C++  C    P
Sbjct:   16 VEVVGLLTEPSFHMAAHAVETLRRNFPKKIAEPKVLPLLQFAWDEYLQEKKKELRGEIWEYPSSVMCFVDG--QLLGDEKMLLKWAYDV----WDYKDFKPTALYEAITSDFLTKYLKAKQRMFVFMEIAIHEVSMG-KLLFELYSDICPRTCHNFKCLCTGEKGYSESGLTLTYKDSIFHRIVKNGWIQGGDIDGGKGNGGESIYGPVFEDESFAVPHDKRGVLGMVNKGRHTNGSQFYITLQPAPYLNTKYVAFGQIIEGSQVLQELELTETFNERPKLQCRIINCNVFQP 301          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: UPI00193FA8DD (probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X2 n=2 Tax=Testudinoidea TaxID=8486 RepID=UPI00193FA8DD)

HSP 1 Score: 227 bits (579), Expect = 8.420e-70
Identity = 114/273 (41.76%), Postives = 171/273 (62.64%), Query Frame = 1
Query:   85 LNDSGISARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWIA----IAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITP 891
            LN     A    +PL E  W EYL+EKK ++ G  +E+ +  +   DG    +G  +EL+++A       +D+    +   +A    I +  C KH+ +S+   V++DI++        ++F+LYS  CP TC NFR+LCTGE G S +G +L YK S FHR+V++GW+QGGDI +G GDGG SIYG  F DE+F+I  N+ G+L MAN G H+NGSQF +TL P P+++ K V FG++I+G +VL+++ +  T N+RP +ECK+  CG + P
Sbjct:   29 LNFPNKIAEPVVLPLLEFAWHEYLQEKKKELKGETWEYPSSVMCFIDG--QLLGSEQELLKWA-------YDKWNYQDFKPVALYQAITEDFCTKHMQNSKHVFVYLDIAIQEQPTGT-LLFELYSDMCPKTCANFRSLCTGEAGTSRSGMELTYKESVFHRLVKNGWIQGGDITAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGQLIEGTEVLQKLEDVSTYNERPVVECKIINCGVLVP 291          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: A0A674HWS8_TERCA (Peptidyl-prolyl cis-trans isomerase n=10 Tax=Cryptodira TaxID=8464 RepID=A0A674HWS8_TERCA)

HSP 1 Score: 225 bits (573), Expect = 1.820e-69
Identity = 110/259 (42.47%), Postives = 168/259 (64.86%), Query Frame = 1
Query:  127 LYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWIA----IAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITP 891
            L E  W EYL+EKK ++ G  +E+ ++ +   DG    +G  +EL+++A       +D+    +   +A    I +  C KH+ +++   V++DI++        ++F+LYS  CP TCENFR+LCTGE G S +G +L YK S FHR+V++GW+QGGDI +G GDGG SIYG  F DE+F+I  N+ G+L MAN G H+NGSQF +TL P P+++ K V FG +I+G +VL+++ +  T N+RP +ECK++ CG + P
Sbjct:    1 LLEFAWHEYLQEKKKELKGETWEYPSRVMCFIDG--QLLGSEQELLKWA-------YDKWNYQDFKPVALYQAITEDFCTKHMQNTKHVFVYLDIAIQEQPTGT-LLFELYSDMCPKTCENFRSLCTGEAGTSRSGLELTYKESVFHRLVKNGWIQGGDITAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGYLIEGTEVLQKLEDVSTYNERPVVECKINNCGVLVP 249          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: A0A836C6W1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W1_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.860e-69
Identity = 128/302 (42.38%), Postives = 174/302 (57.62%), Query Frame = 1
Query:   22 IVVVGCVSDASFHRCCRLVRVLNDSGISAR--VTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRT-YMGGIEELI--RFAEATVAPPFDRSEGDNTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGE----VFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITPEEF 900
            I V G +S   FH+CC      N++ +  +  V    L E  WE Y+  K+ Q GG+ ++HTA+++VL DG  T     ++ L+  RF + T+       E    DW A A+   +   A+ + PLV+MD+  D   +PQRVVF+LYS  CP  CENFR LCT  +   +      Y G+PFHRVV  GWVQGGD+  G GD G           F DE+F +K + AGVLAMAN GPHTN SQFLV LA  PWL+ + V FGRV +G++ LR + +  TLNQRP  + +V  CG++ PE+ 
Sbjct:    3 ITVAGDISAPEFHQCCSYT---NEAALVLQTDVDIKALLEIDWEAYVVRKQQQDGGQYYKHTARYVVLVDGAYTGVQSDLQALLQARFPQHTI-------ERIPQDWQAAARHALK---AAVRNPLVYMDV--DVGGKPQRVVFELYSDVCPRACENFRRLCTSRRAGQT------YLGTPFHRVVPGGWVQGGDVAGGAGDRGSCALDNCASGTFEDETFDVKFDAAGVLAMANAGPHTNASQFLVALAQLPWLDRRAVAFGRVARGMRALRALEDVATLNQRPLRDARVVACGELAPEDL 283          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: H2Z9J3_CIOSA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z9J3_CIOSA)

HSP 1 Score: 226 bits (577), Expect = 2.580e-69
Identity = 121/297 (40.74%), Postives = 180/297 (60.61%), Query Frame = 1
Query:   22 IVVVGCVSDASFH--RCCR--LVRVLNDSGISARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGD---NTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITP 891
            I V G +   +FH  +CC   L    +D      + SM   E +W+ +++ KK ++ G ++ +T   L   +     +G  +EL+++A+      +D +  D   +  + A+A +    +  +S    VFMDIS+D S +  R++F+LYS  CP TC NFR+LCTGEKG   +G +LNY  SP HR+V +GW+QGGDI+ G GDGG SIYGEVF DE+FA+  +  GVL MAN G HT GSQF +TL P PW+N + V FGR+I+G ++L+ M    T N+RP ++C++  CG+  P
Sbjct:   20 IEVYGLLQTEAFHIAKCCAEDLKSKFDDKYAEPTIKSM--LECEWDRFVEAKKIELKGDLWAYTESVLCFVNNN--LIGNHKELLQWAQ------YDSNYEDFRPDALYSAMATEGYRDYFLNSDNEFVFMDISID-SEKSGRLLFELYSSICPKTCANFRSLCTGEKGSLPSGLQLNYSSSPIHRIVPNGWIQGGDILHGRGDGGESIYGEVFEDENFAVPHDTRGVLGMANKGRHTAGSQFYITLQPSPWMNCQYVAFGRLIEGTELLKTMENLPTFNERPKVDCRISGCGKFVP 305          
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Match: A0A3P8YMY6_ESOLU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YMY6_ESOLU)

HSP 1 Score: 224 bits (572), Expect = 9.840e-69
Identity = 112/259 (43.24%), Postives = 162/259 (62.55%), Query Frame = 1
Query:  115 TSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITP 891
            T  PL+E +W  YL  KK ++ G +++ ++  +   +G    +G  ++L  +AE      F R +     ++A+A     KHL S+    V+MDI +   S   R++F+L+++ CP TC+NF+ LCTGE G S +   L+YKGS FHRVV +GW+QGGDI SG G+GG SIYG  FGDESFA+  ++ G+L MAN GPH+N SQF +TL P  W++ K V FG+V++G  VLR + E  T N+RP  +C+V  CG   P
Sbjct:   40 TIRPLFECEWHVYLTNKKKELRGEVWQFSSNQMCFVNG--CLLGNEKDLTSWAEKQWKFTFPRPQAL---YLALANDYYSKHLRSTGHTFVYMDIFISGES-VGRLLFELFTELCPKTCKNFQTLCTGEAGKSQSDLLLSYKGSIFHRVVLNGWIQGGDIASGKGNGGESIYGPTFGDESFAVSHSKRGILGMANQGPHSNSSQFYITLQPALWMDRKYVAFGQVVEGQDVLRRLEEVPTYNERPKPQCEVADCGVFEP 292          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig170.3912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ83_ECTSI8.380e-19696.24Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A7S2V0W8_9STRA4.730e-7543.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A452HTC7_9SAUR1.020e-7140.88Peptidyl-prolyl cis-trans isomerase n=14 Tax=Crypt... [more]
A0A087YNR3_POEFO1.120e-7042.37Peptidyl-prolyl cis-trans isomerase n=14 Tax=Poeci... [more]
UPI000EA9FB605.720e-7041.98problable inactive peptidyl-prolyl cis-trans isome... [more]
UPI00193FA8DD8.420e-7041.76probable inactive peptidyl-prolyl cis-trans isomer... [more]
A0A674HWS8_TERCA1.820e-6942.47Peptidyl-prolyl cis-trans isomerase n=10 Tax=Crypt... [more]
A0A836C6W1_9STRA1.860e-6942.38Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
H2Z9J3_CIOSA2.580e-6940.74PPIase cyclophilin-type domain-containing protein ... [more]
A0A3P8YMY6_ESOLU9.840e-6943.24Peptidyl-prolyl cis-trans isomerase n=2 Tax=Esox l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig170contigE-siliculosus-1a_F_contig170:7085..9581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size921
Model size921
Exons5
Ec32 orthologEc-02_005120.1
Ec32 ortholog descriptionradial spoke protein 12
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03110
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EC5.2.1.8
EggNOG OGsCOG0652@1,KOG0546@2759
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
KEGG koko:K01802,ko:K12739
Preferred namePPIL6
Seed eggNOG ortholog2880.D8LJ83
Seed ortholog evalue2.2e-152
Seed ortholog score545.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig170.3912.1prot_E-siliculosus-1a_F_contig170.3912.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig170 7085..9581 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928201.1055408-CDS-E-siliculosus-1a_F_contig170:7084..72201622928201.1055408-CDS-E-siliculosus-1a_F_contig170:7084..7220Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 7085..7220 -
1696318845.462337-CDS-E-siliculosus-1a_F_contig170:7084..72201696318845.462337-CDS-E-siliculosus-1a_F_contig170:7084..7220Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 7085..7220 -
1622928201.149967-CDS-E-siliculosus-1a_F_contig170:7827..80851622928201.149967-CDS-E-siliculosus-1a_F_contig170:7827..8085Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 7828..8085 -
1696318845.4760394-CDS-E-siliculosus-1a_F_contig170:7827..80851696318845.4760394-CDS-E-siliculosus-1a_F_contig170:7827..8085Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 7828..8085 -
1622928201.1605327-CDS-E-siliculosus-1a_F_contig170:8387..85601622928201.1605327-CDS-E-siliculosus-1a_F_contig170:8387..8560Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 8388..8560 -
1696318845.483767-CDS-E-siliculosus-1a_F_contig170:8387..85601696318845.483767-CDS-E-siliculosus-1a_F_contig170:8387..8560Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 8388..8560 -
1622928201.1752877-CDS-E-siliculosus-1a_F_contig170:8997..91561622928201.1752877-CDS-E-siliculosus-1a_F_contig170:8997..9156Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 8998..9156 -
1696318845.4912727-CDS-E-siliculosus-1a_F_contig170:8997..91561696318845.4912727-CDS-E-siliculosus-1a_F_contig170:8997..9156Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 8998..9156 -
1622928201.1890352-CDS-E-siliculosus-1a_F_contig170:9386..95811622928201.1890352-CDS-E-siliculosus-1a_F_contig170:9386..9581Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 9387..9581 -
1696318845.4990063-CDS-E-siliculosus-1a_F_contig170:9386..95811696318845.4990063-CDS-E-siliculosus-1a_F_contig170:9386..9581Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig170 9387..9581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig170.3912.1

>prot_E-siliculosus-1a_F_contig170.3912.1 ID=prot_E-siliculosus-1a_F_contig170.3912.1|Name=mRNA_E-siliculosus-1a_F_contig170.3912.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=307bp
MSSPSNGIVVVGCVSDASFHRCCRLVRVLNDSGISARVTSMPLYETQWEE
YLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFD
RSEGDNTDWIAIAQQRCEKHLASSQCPLVFMDISLDPSSRPQRVVFQLYS
QDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVS
GTGDGGWSIYGEVFGDESFAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQ
PWLNHKVVGFGRVIKGLKVLREMSEGDTLNQRPAMECKVHKCGQITPEEF
AKFTCK*
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mRNA from alignment at E-siliculosus-1a_F_contig170:7085..9581-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig170.3912.1 ID=mRNA_E-siliculosus-1a_F_contig170.3912.1|Name=mRNA_E-siliculosus-1a_F_contig170.3912.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2497bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig170:7085..9581- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCGTCGCCGAGCAATGGAATCGTGGTGGTTGGGTGCGTCTCGGATGC TTCTTTTCACCGCTGCTGTCGATTAGTCAGAGTCCTGAATGATTCCGGCA TTTCAGCGAGGGTCACGTCGATGCCCCTTTACGAGACTCAGTGGGAAGAG TATTTGAAAGAAAAGAAGACACAGGTCGGAGGAAGAATATTTGAGGTACG TCGACGTTGGTTTACGTTTGGTTGAAACCAAATCCATTGCCTTTTGCGGT CGACAGGCTACCCTAGAACATAGACATAGAAGTTACGGTATGAACCGGTG GTGCGCAGAGTGGTGCATGCGCTTGATCTCCGCGCCGTCTCTCAATTATA TTTCTTTGTGAGGGCCCTCCAAGTTGCACTTACAGCAGTATCCCGCGTAC GCTCTGTTTTTGTCTCCACGAACAGCACACAGCGAAGCACCTGGTGCTAC AAGATGGCGGCCGGACGTACATGGGTGGGATAGAAGAGCTTATTAGGTTT GCCGAGGCCACGGTTGCCCCTCCGTTCGATAGGAGCGAAGGCGACAATAC GGATTGGATTGCAATAGCGCAACAGCGGTGCGAGGTGAGTTACTGTGCGT AGCAAGACAACTTCCCTCTTGTCCCTATGTTTCTATTAATATATACTCTT AAGGGTTACGGGCTCTTCAACGTAGAGTCCATGCCTGGAAACTCACACCG TAAGGCACCTTGCACTGCAGTACATACGTATGTATGTAGCCCTTGGTGGA GAAAGAGCGGAGGGATTGAAGACACCTACAGCTGTACGAAAGGGCGACGG CCGTGATGATTGTGTTACAGATAAGCCAGTCCTGATGAAGTTCTTGAAAG TGCATGCTCTACGTTTGGCCGTTGAGATTCCCTATGAGAACATTCATGAG TTTGAGAGCTGGCACAATCGCGTAAAACACGGCCAAATGTTTTTGTCGTG CTCTGATACGTTACCTGACCCCGTGCTCACCTTGTGAGTCTCCCTTGCCG ATGTCCACACTCGATTCTCAGAAACACCTCGCTAGCAGCCAGTGCCCATT GGTGTTCATGGATATCTCTCTAGATCCATCCTCTCGACCACAGAGAGTTG TGTTCCAGTTGTACAGCCAAGACTGCCCCACCACGTGCGAGAACTTCCGG GCCCTCTGCACGGGCGAGAAAGGGATGTCGTCAAACGGGAAAAAGTAAGC GCAGCAATGGGATTGACTGGTAGCGGGATCAAAGTTGCTGGACATCAGTC TGCCTTTGACCCAACAGATAACGCTCTTCGCACTTACATTGTAAGGTTCA GGACCTCCGGGTGTCGCTCCGAAACAAGGCGACTGTAGCTGGAGCATGGC CACGCACCACTACTCTCCCGGGAGCGTGCATCCCGCACCCCGAAATGTAT CATCTTCCAGAAAAGGGGGAAAACTGAACGTGTAAGATATATGATTCACA CTTGACTTTGTCCCATCTTGGCCATACATACGCGCAAACATAAAAGGCTT AACTACAAGGGGAGCCCCTTCCACCGCGTGGTACGAGACGGATGGGTGCA GGGAGGGGACATAGTGTCAGGGACCGGGGACGGCGGCTGGTCGATCTACG GAGAAGTCTTCGGCGACGAATCCTTCGCGATCAAGCTGAACGAGGCCGGA GTCCTGGCCATGGCAAACGACGGTCCGCACACGAACGGCTCTCAGTTCCT AGTCACCCTCGCGCCCCAGCCGTGGCTGAACCACAAAGTGGTCGGGTTTG GCAGGTGAGAGGATGTCGACTGCCCTTTGCGTCCAGATGCATGATCGATT TTAGGCGTCGAAGGTCCTGGGAAAGACGTCATAGGGCCTGAGAAGTCTCG ACCACGCTCTGACTGTCCGTCGTGGGTCAACACAAGCTTAGCAGGCGAGA ACGTATTTGTTGTGTGGATCTCCAGGAATCGGTCCCTCTGTTCAGCTCTA GTATAAACCCTCTCTCCGCTCACGAAATGGTCCCCCTAGTCTCCGGGCCG TGACCGAATCAGGACCAGGTGATCGGTGAGCATAGCACGTGTGGAAGGTA GTCCACATCGTCGAGTGTGTGCGAACGGGAGATTGGACATTTACTTGTGG TTGCAACTGGTCATCCAGTTAATGCCCGTCATGTGTAGCAGCCAAACAAA GATAGCTGGATGACCATCGAACGAATTTTTTCGAGTAGAATACTTCAATC ATTGACTGATACGCAATGAGCTTTGCACTCTCCACAAGAAACCTGGTACC ATACTCTCGCACCCCGTTGCATGAGGACTCTCTCACACACTTCTGATATA CATCGGTACATCGGCAACCCTCCTTGGCTATCTACTACGCTTGGGTAAAT GGCACTGGCAGGGTCATCAAGGGTCTGAAAGTGCTGCGAGAGATGAGTGA GGGGGATACCCTTAACCAACGCCCGGCGATGGAGTGCAAGGTCCACAAGT GCGGGCAGATCACTCCCGAAGAATTCGCCAAGTTTACCTGCAAGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig170:7085..9581-

>mRNA_E-siliculosus-1a_F_contig170.3912.1 ID=mRNA_E-siliculosus-1a_F_contig170.3912.1|Name=mRNA_E-siliculosus-1a_F_contig170.3912.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig170:7085..9581- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCGTCGCCGAGCAATGGAATCGTGGTGGTTGGGTGCGTCTCGGATGC
TTCTTTTCACCGCTGCTGTCGATTAGTCAGAGTCCTGAATGATTCCGGCA
TTTCAGCGAGGGTCACGTCGATGCCCCTTTACGAGACTCAGTGGGAAGAG
TATTTGAAAGAAAAGAAGACACAGGTCGGAGGAAGAATATTTGAGATGTC
GTCGCCGAGCAATGGAATCGTGGTGGTTGGGTGCGTCTCGGATGCTTCTT
TTCACCGCTGCTGTCGATTAGTCAGAGTCCTGAATGATTCCGGCATTTCA
GCGAGGGTCACGTCGATGCCCCTTTACGAGACTCAGTGGGAAGAGTATTT
GAAAGAAAAGAAGACACAGGTCGGAGGAAGAATATTTGAGCACACAGCGA
AGCACCTGGTGCTACAAGATGGCGGCCGGACGTACATGGGTGGGATAGAA
GAGCTTATTAGGTTTGCCGAGGCCACGGTTGCCCCTCCGTTCGATAGGAG
CGAAGGCGACAATACGGATTGGATTGCAATAGCGCAACAGCGGTGCGAGC
ACACAGCGAAGCACCTGGTGCTACAAGATGGCGGCCGGACGTACATGGGT
GGGATAGAAGAGCTTATTAGGTTTGCCGAGGCCACGGTTGCCCCTCCGTT
CGATAGGAGCGAAGGCGACAATACGGATTGGATTGCAATAGCGCAACAGC
GGTGCGAGAAACACCTCGCTAGCAGCCAGTGCCCATTGGTGTTCATGGAT
ATCTCTCTAGATCCATCCTCTCGACCACAGAGAGTTGTGTTCCAGTTGTA
CAGCCAAGACTGCCCCACCACGTGCGAGAACTTCCGGGCCCTCTGCACGG
GCGAGAAAGGGATGTCGTCAAACGGGAAAAAAAACACCTCGCTAGCAGCC
AGTGCCCATTGGTGTTCATGGATATCTCTCTAGATCCATCCTCTCGACCA
CAGAGAGTTGTGTTCCAGTTGTACAGCCAAGACTGCCCCACCACGTGCGA
GAACTTCCGGGCCCTCTGCACGGGCGAGAAAGGGATGTCGTCAAACGGGA
AAAAGCTTAACTACAAGGGGAGCCCCTTCCACCGCGTGGTACGAGACGGA
TGGGTGCAGGGAGGGGACATAGTGTCAGGGACCGGGGACGGCGGCTGGTC
GATCTACGGAGAAGTCTTCGGCGACGAATCCTTCGCGATCAAGCTGAACG
AGGCCGGAGTCCTGGCCATGGCAAACGACGGTCCGCACACGAACGGCTCT
CAGTTCCTAGTCACCCTCGCGCCCCAGCCGTGGCTGAACCACAAAGTGGT
CGGGTTTGGCAGGCTTAACTACAAGGGGAGCCCCTTCCACCGCGTGGTAC
GAGACGGATGGGTGCAGGGAGGGGACATAGTGTCAGGGACCGGGGACGGC
GGCTGGTCGATCTACGGAGAAGTCTTCGGCGACGAATCCTTCGCGATCAA
GCTGAACGAGGCCGGAGTCCTGGCCATGGCAAACGACGGTCCGCACACGA
ACGGCTCTCAGTTCCTAGTCACCCTCGCGCCCCAGCCGTGGCTGAACCAC
AAAGTGGTCGGGTTTGGCAGGGTCATCAAGGGTCTGAAAGTGCTGCGAGA
GATGAGTGAGGGGGATACCCTTAACCAACGCCCGGCGATGGAGTGCAAGG
TCCACAAGTGCGGGCAGATCACTCCCGAAGAATTCGCCAAGTTTACCTGC
AAGTAGGGTCATCAAGGGTCTGAAAGTGCTGCGAGAGATGAGTGAGGGGG
ATACCCTTAACCAACGCCCGGCGATGGAGTGCAAGGTCCACAAGTGCGGG
CAGATCACTCCCGAAGAATTCGCCAAGTTTACCTGCAAGTAG
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