mRNA_E-siliculosus-1a_F_contig16995.3908.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: A0A2D9B4X7_ALTSX (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2D9B4X7_ALTSX) HSP 1 Score: 357 bits (916), Expect = 2.500e-117 Identity = 185/267 (69.29%), Postives = 220/267 (82.40%), Query Frame = 1
Query: 1 LDEGIKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYNYGTDELDVTEEEEDFDWKEDVESIEEIDIKNK-----DKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
+ EGI+DE + WL YYQ+LTQTAKIIRLDVQ SQDAYKLFETINNRGLRLS+TDILKNFILGHAAKIG +KL VK+ WA+LIIALDG+++DDFFRQYIS +YTRKIS TK+IE+FKK YFKRV +VDKLGEYLYNYGT E EED D ++D E IEEI ++ + DK++I +L I+NAAKCYS IW+S FEN +IN+ IDELKAIRSRP+YIFLMHFLQ+N N +KEK+ VL M TLMLRRH+TGQ+TAY ++IF
Sbjct: 160 IHEGIQDEEEGWLKSYYQRLTQTAKIIRLDVQQSQDAYKLFETINNRGLRLSATDILKNFILGHAAKIGADKLRLVKDQWAELIIALDGINSDDFFRQYISGIYTRKISSTKLIEEFKKNYFKRVLDVDKLGEYLYNYGTPE------EEDLD-EDDYEEIEEIQLEAELNDEHDKIEINEYLADIVNAAKCYSKIWHSTFENQKINNKIDELKAIRSRPSYIFLMHFLQENGNTLKEKLKVLEMCATLMLRRHMTGQSTAYNDDIF 419
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: A0A519TVN7_9SPHI (DUF262 domain-containing protein n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A519TVN7_9SPHI) HSP 1 Score: 293 bits (751), Expect = 1.600e-92 Identity = 152/265 (57.36%), Postives = 199/265 (75.09%), Query Frame = 1
Query: 1 LDEGIKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYNYGTDEL-DVTEEEEDFDWK--EDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
+++ ++ D W+ Y+QKL TAKIIRLDVQ +QDAYKLFETINNRGL+LS TDILKNFILGHAAKI KL EVK +WADLIIALDG+ TDDFFRQY++SVYTRKI+ K+IE+FKK YFK V +VDKLGEY YN G E D+ +E+ED + + D+E EE + ++DI+ +L +I+NA KCYS IWYSNF++ ++N + +L+A+RS P+YIFLMH+LQ + KEK VL I T+MLRRH+ + T+ ++IF
Sbjct: 161 INDAYDEKGDEWINGYFQKLIYTAKIIRLDVQQAQDAYKLFETINNRGLKLSVTDILKNFILGHAAKISETKLEEVKTLWADLIIALDGIPTDDFFRQYVTSVYTRKITVNKLIEEFKKHYFKNVKDVDKLGEYRYNNGAGESEDIYDEDEDTNEEPLNDLEQEEEEIVLTGKRIDISDYLREIVNAGKCYSKIWYSNFDDKKLNKRLQDLQAVRSFPSYIFLMHYLQTDTPK-KEKYKVLEFITTVMLRRHICSRRTSENDDIF 424
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: I3Z6K8_BELBD (Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) TaxID=866536 RepID=I3Z6K8_BELBD) HSP 1 Score: 282 bits (722), Expect = 3.080e-88 Identity = 148/264 (56.06%), Postives = 198/264 (75.00%), Query Frame = 1
Query: 1 LDEGIKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYNYGTDELDVTEEEEDFDWKEDV-ESIEE-IDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
+++ IKDE + WL + KL TAKIIRLDV +QDAYKLFETINNRGL+LS+TDILKNFILGHAAKI +KLN +E+W++LII LDG+ TDDFFRQY+ +YTRKIS +K++E+FKK+YFK+V EVDKLGE+ YNYGT ++ E ++D + +++ ES +E + + +++DI +L IL AA CYS IW F + +IN I +L+ IRS P+YIFLMH+LQ E K+ VL++IG MLRRHVT Q+TAY ++IF
Sbjct: 161 IEDAIKDEGEVWLDTFLSKLIHTAKIIRLDVMQAQDAYKLFETINNRGLQLSATDILKNFILGHAAKISEDKLNGAREVWSELIIQLDGIPTDDFFRQYVCGLYTRKISSSKLVEEFKKDYFKKVQEVDKLGEFRYNYGT--IETAEFDDDSELYDEISESHDEPTEYDHIERIDILNYLKSILKAASCYSKIWNLKFSDKKINQRIADLQDIRSFPSYIFLMHYLQM-ELPKKDVYKVLDLIGVTMLRRHVTSQSTAYNDDIF 421
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: UPI00191F8A4B (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191F8A4B) HSP 1 Score: 267 bits (683), Expect = 1.890e-82 Identity = 137/264 (51.89%), Postives = 199/264 (75.38%), Query Frame = 1
Query: 1 LDEGIKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLY--NYGTDELDVTEEEEDFDWKEDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
++E +++E ++WL D+Y KL TAKIIRLDVQ ++DAYKLFETINNRGL+LS+TDILKNFILGHAAKI + KLN+VKEIW+++I LDG+ TDDFFRQYI VYT +I+++++IE FKK+Y +V++V+ +GEY Y +Y ++E +++ED D ++++S E + N +VDIT++L +ILN AK Y+ +W +F ++NS + +L+ I+S P YIFLM FLQ + I+EK+ VLN+I LMLRRH+ + T+ + IF
Sbjct: 159 INERLEEEGESWLEDFYNKLVHTAKIIRLDVQQARDAYKLFETINNRGLKLSATDILKNFILGHAAKISDHKLNDVKEIWSNIITTLDGIPTDDFFRQYICGVYTTRITQSRLIEYFKKDYLSKVDKVELIGEYAYYADYYSNEEITDDDDEDVDLDDNIKSKE---LSNDSRVDITIYLKEILNCAKTYAGVWNLSFSEDKLNSKLKDLRDIKSFPTYIFLMRFLQ-TDKPIQEKLLVLNLILILMLRRHICRRRTSENDIIF 418
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: A0A1X7J6R6_9BACT (Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1X7J6R6_9BACT) HSP 1 Score: 265 bits (678), Expect = 1.180e-81 Identity = 143/268 (53.36%), Postives = 190/268 (70.90%), Query Frame = 1
Query: 1 LDEGIKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYNYGTDELDVTEEEEDFDWKEDVESIEEIDIKNK------DKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
+ I +E + WL +Y KLT TAKIIRLDVQ +QDAYKLFETINNRGLRLS+TDILKNFILGHAAKIG +KL EVKE W+ LI LDG+ TDDFFRQYISS+YTR+++++K+IE FK++Y +V+ VD +GEY Y +D + EE D +++VE E K+K ++DIT ++ QIL+ A+ YSNIW F+ ++N + +L I+S P YIFLMHFLQ+ + + EK+ VL+MI LMLRRHV + T+ + IF
Sbjct: 159 ISNRINEEGEEWLDKFYNKLTHTAKIIRLDVQQAQDAYKLFETINNRGLRLSATDILKNFILGHAAKIGKQKLEEVKEQWSSLITTLDGIPTDDFFRQYISSIYTRRVTKSKLIEYFKEDYLNKVDNVDLIGEYAYY--SDYYNGAEESNDP--EDEVEEAPEDQPKSKKVKNSHSRIDITNYIQQILSCAEVYSNIWNKTFDEEKLNKKLRDLSDIKSFPTYIFLMHFLQRGKT-LNEKLEVLDMISALMLRRHVCARRTSENDIIF 421
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: UPI001AE0DA08 (DUF262 domain-containing protein n=1 Tax=Chryseobacterium sp. RR2-3-20 TaxID=2787626 RepID=UPI001AE0DA08) HSP 1 Score: 265 bits (677), Expect = 1.820e-81 Identity = 141/266 (53.01%), Postives = 192/266 (72.18%), Query Frame = 1
Query: 13 IKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYN--------YGTDELDVTEEEEDFDWKEDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
I + ++WL D+Y+KL TAKIIRLDVQ +QDAYKLFETINNRGL LS+TDILKNFILGHAAK+G EKL EVKE+W+ +I++LDG+STDDFFRQYISSVY RKI++T +I+ FKK+YFK+V V LGEYLYN DE+D D K + ++E+ +D++D+ +L +I+N A YS I+ F + +IN+ + +L AIRS P+YIFLMHF+QK+ + E+ +L+M+G +MLRRHV + T+ ++IF
Sbjct: 165 ISQDGESWLTDFYRKLVHTAKIIRLDVQQAQDAYKLFETINNRGLPLSATDILKNFILGHAAKMGVEKLEEVKELWSQVIVSLDGISTDDFFRQYISSVYNRKITKTNLIDAFKKDYFKKVKNVHLLGEYLYNEEEKDSTEINEDEIDEETINTDNSTKVIIGNVEQAS-NEEDRIDLADYLKKIVNCALTYSKIFNKKFPSDKINAKLRDLAAIRSFPSYIFLMHFMQKSFSE-SEQFRMLDMVGAIMLRRHVCERRTSENDDIF 428
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: UPI000DEB9FE0 (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Aquiflexum aquatile TaxID=2249427 RepID=UPI000DEB9FE0) HSP 1 Score: 194 bits (494), Expect = 1.250e-54 Identity = 109/248 (43.95%), Postives = 161/248 (64.92%), Query Frame = 1
Query: 46 YYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEK-LNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYNYGTDELDVTEEEEDFDWKEDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
++ KLT A +IRLDV +QDAYKLFETINNRGL+LS TDI+KNF+LGHAAKI ++ L +VKE+W+++I+ LD + TDDF RQ I S+ RK++ T ++ +FKK Y K + + + LGE+ +Y +D+ + ++ ++ + E ES EE D + ++ I L I A Y I + F ++N I L I S+P YIFLMHFL+ ++ K K+ VL + TLMLRRH+ + T+ ++IF
Sbjct: 173 FFYKLTNVAVVIRLDVGMAQDAYKLFETINNRGLKLSPTDIIKNFLLGHAAKINQDQTLEKVKELWSNIIMDLDEIDTDDFLRQLICSLLHRKVTMTMLVPEFKKFYLKNIEKAELLGEF--DYFSDDSGIEDDLDEVELNE-RESTEE-DSNIRTRISIIELLQIIRTLALSYRKITFEEFPRVKLNRRIGNLNKILSKPTYIFLMHFLKNDDYTEKTKLEVLKFLETLMLRRHICERRTSENDDIF 416
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: UPI0003FE6653 (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Daejeonella oryzae TaxID=1122943 RepID=UPI0003FE6653) HSP 1 Score: 194 bits (493), Expect = 1.600e-54 Identity = 111/249 (44.58%), Postives = 161/249 (64.66%), Query Frame = 1
Query: 46 YYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEK-LNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEY-LYNYGTDELDVTEEEEDFDWKEDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
+Y KLT TA IIRLDV +QDAYKLFETINNRGLRL++TD++KNF+LGHAAKI ++ L++VK +W+++I LD L +DDF R ++ + K+S +K+I +FKK Y + V D LGEY Y+YG V +++ED DVE+ + +K+ I FL + + ++ Y I F++ +IN I L I S+P+YIFLM+FLQ + K K+ VL + +LMLRRH+ T+ ++IF
Sbjct: 173 FYFKLTNTAVIIRLDVGMAQDAYKLFETINNRGLRLTATDVIKNFLLGHAAKINSDHTLDKVKSLWSEIITNLDQLDSDDFLRHFMCATLKHKLSMSKLIYEFKKHYLRNVENADLLGEYGYYDYG-----VQDDDED-----DVETGSNSEDTISNKISIIEFLTGLCHLSETYKQISKETFKDVKINRRISNLNNILSKPSYIFLMYFLQDPKYVQKTKLQVLEYLESLMLRRHICENRTSDNDDIF 411
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: UPI000C06A1C3 (DUF262 domain-containing HNH endonuclease family protein n=2 Tax=Bacillaceae TaxID=186817 RepID=UPI000C06A1C3) HSP 1 Score: 193 bits (491), Expect = 3.460e-54 Identity = 112/251 (44.62%), Postives = 153/251 (60.96%), Query Frame = 1
Query: 37 LIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYL-YNYGTDELDVTEEEEDFDWKEDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
L ++ KLT +IRLDV ++DAYKLFETINNRGL+LS TDI+KNF+LGHA+ I L EVK W ++II LDG+ TDDFFRQY+S + +KI+ + ++ +FK YF V E + L E++ Y TDE D +ED E EEI + + K+ IT F ++ NA+ Y I +FE+ N + L I+S P+ IFL+ Q+N K+KV +L +I T MLRRHV TA + IF
Sbjct: 170 LYEFVHKLTNNTFVIRLDVADAKDAYKLFETINNRGLKLSPTDIIKNFLLGHASLIEENTLEEVKRYWTEVIINLDGIKTDDFFRQYLSYLLKKKITASNIVVEFKNLYFNTVKEAENLNEFIVYEDLTDETDDDVSDEDLV----TEVQEEIIVNHTHKISITEFAKRLRNASNIYKQIRNQSFESKVFNRHLRNLTMIKSFPSNIFLLDLFQRNIKE-KDKVHILKLIETFMLRRHVCEYRTAELDTIF 415
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Match: UPI000BF9A382 (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Priestia megaterium TaxID=1404 RepID=UPI000BF9A382) HSP 1 Score: 191 bits (484), Expect = 3.300e-53 Identity = 112/250 (44.80%), Postives = 154/250 (61.60%), Query Frame = 1
Query: 37 LIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRLSSTDILKNFILGHAAKIGNEKLNEVKEIWADLIIALDGLSTDDFFRQYISSVYTRKISRTKVIEDFKKEYFKRVNEVDKLGEYLYNYGTDELDVTEEEEDFDWKEDVESIEEIDIKNKDKVDITVFLNQILNAAKCYSNIWYSNFENAQINSGIDELKAIRSRPAYIFLMHFLQKNENNIKEKVSVLNMIGTLMLRRHVTGQTTAYKNEIF 786
L++++ KL IRLDV ++DAYKLFETINNRGL LS TDI+KNF+LGH++ I ++ L +VK W +LII LDG++TDDFFRQY+SS+ RKI+ + +I++FKK YF V E + L E+ Y + L+ EEE + EI KN DKV I F + +AAK Y + +F N +N + L I+S PAYIFL+ Q++ K K+ +L +I T MLRRHV T + IF
Sbjct: 170 LLEFHYKLVSNTYTIRLDVASAKDAYKLFETINNRGLSLSPTDIIKNFLLGHSSLISDDTLGKVKGYWTELIINLDGINTDDFFRQYLSSILKRKITGSIIIDEFKKYYFNSVIEAENLNEFS-QYESLNLETDEEELEDTSVXXXXXXXEIKEKN-DKVSIVKFAQNLRDAAKIYGYMRNQSFSNHTVNKHLKNLTKIKSFPAYIFLLDLFQRDVEETK-KIEILKLIETFMLRRHVCEYRTGELDAIF 416 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16995.3908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig16995.3908.1 >prot_E-siliculosus-1a_F_contig16995.3908.1 ID=prot_E-siliculosus-1a_F_contig16995.3908.1|Name=mRNA_E-siliculosus-1a_F_contig16995.3908.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=262bp LDEGIKDEPDNWLIDYYQKLTQTAKIIRLDVQHSQDAYKLFETINNRGLRback to top mRNA from alignment at E-siliculosus-1a_F_contig16995:15..800+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig16995.3908.1 ID=mRNA_E-siliculosus-1a_F_contig16995.3908.1|Name=mRNA_E-siliculosus-1a_F_contig16995.3908.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=786bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16995:15..800+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16995:15..800+ >mRNA_E-siliculosus-1a_F_contig16995.3908.1 ID=mRNA_E-siliculosus-1a_F_contig16995.3908.1|Name=mRNA_E-siliculosus-1a_F_contig16995.3908.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16995:15..800+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |