mRNA_E-siliculosus-1a_F_contig16980.3903.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: A0A1D9PEE8_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium commune TaxID=1306519 RepID=A0A1D9PEE8_9FLAO) HSP 1 Score: 194 bits (493), Expect = 2.410e-61 Identity = 94/121 (77.69%), Postives = 113/121 (93.39%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEE-FQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLPE 360
Y+LIEN+DDNEYLKNFKSF+Y QNSNYK+LLD+++S++ FQV++MGHSCGLSDRT+LNTIFEH NC+SIKVFYHQ++DGSDN+TEI+QNISRHFN KKLMREKIVNK+L PLPQ QLP+
Sbjct: 52 YKLIENIDDNEYLKNFKSFQYLQNSNYKSLLDFVESDKKFQVYIMGHSCGLSDRTMLNTIFEHSNCISIKVFYHQREDGSDNYTEIIQNISRHFNKKKLMREKIVNKTLCHPLPQI-QLPK 171
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: A0A0P7A3L0_9FLAO (Uncharacterized protein n=1 Tax=Croceitalea dokdonensis DOKDO 023 TaxID=1300341 RepID=A0A0P7A3L0_9FLAO) HSP 1 Score: 201 bits (510), Expect = 8.100e-61 Identity = 95/115 (82.61%), Postives = 110/115 (95.65%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEEFQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQN 345
Y+ IENL+DNEYLKNFKSFKYSQNSNYKNLLDYIDS++FQV+VMGHSCGLSDRTLLNTIFEH NC SIKVFY+Q++DG+DNFTEI+QN+SRHFN+KK+MR K+VNKSL +PLPQN
Sbjct: 298 YKSIENLNDNEYLKNFKSFKYSQNSNYKNLLDYIDSDKFQVYVMGHSCGLSDRTLLNTIFEHDNCRSIKVFYYQREDGTDNFTEIIQNMSRHFNDKKMMRAKVVNKSLCQPLPQN 412
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: UPI000AAD96C0 (AbiH family protein n=1 Tax=Flavobacterium commune TaxID=1306519 RepID=UPI000AAD96C0) HSP 1 Score: 194 bits (493), Expect = 1.650e-60 Identity = 94/121 (77.69%), Postives = 113/121 (93.39%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEE-FQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLPE 360
Y+LIEN+DDNEYLKNFKSF+Y QNSNYK+LLD+++S++ FQV++MGHSCGLSDRT+LNTIFEH NC+SIKVFYHQ++DGSDN+TEI+QNISRHFN KKLMREKIVNK+L PLPQ QLP+
Sbjct: 113 YKLIENIDDNEYLKNFKSFQYLQNSNYKSLLDFVESDKKFQVYIMGHSCGLSDRTMLNTIFEHSNCISIKVFYHQREDGSDNYTEIIQNISRHFNKKKLMREKIVNKTLCHPLPQI-QLPK 232
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: A0A1I4UYS1_9FLAO (Bacteriophage abortive infection AbiH n=1 Tax=Flavobacterium succinicans TaxID=29536 RepID=A0A1I4UYS1_9FLAO) HSP 1 Score: 192 bits (489), Expect = 6.420e-58 Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEEFQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLP 357
Y+ IENLDDNEYLKNFKSF+Y QNSNYK LLD+ID+ +FQV ++GHSCGLSDRTLLNTIFEH NC SIKV+YHQKDDGSDN+TEI+QNISRHFN KKLMREKIVNK+L K LPQ QLP
Sbjct: 277 YKRIENLDDNEYLKNFKSFQYLQNSNYKKLLDFIDTNKFQVVILGHSCGLSDRTLLNTIFEHTNCRSIKVYYHQKDDGSDNYTEIIQNISRHFNKKKLMREKIVNKTLCKLLPQI-QLP 394
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: UPI00188BD854 (AbiH family protein n=1 Tax=Flavobacterium sp. HJJ TaxID=2783792 RepID=UPI00188BD854) HSP 1 Score: 191 bits (484), Expect = 3.350e-57 Identity = 93/121 (76.86%), Postives = 111/121 (91.74%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEE-FQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLPE 360
Y+ IENLDDNEYLKNFKSF+Y QNSNYK LLD+++S++ FQV++MGHSCGLSDRT+LNTIFEH NC SIKVFYHQ++DG+DN+TEI+QNISRHFN KKLMREKIVNK+L +PLPQ QLP+
Sbjct: 274 YKTIENLDDNEYLKNFKSFQYLQNSNYKQLLDFVESDQKFQVYIMGHSCGLSDRTMLNTIFEHPNCRSIKVFYHQREDGTDNYTEIIQNISRHFNKKKLMREKIVNKTLCQPLPQI-QLPK 393
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: UPI00140B36E5 (AbiH family protein n=1 Tax=Flavobacterium bernardetii TaxID=2813823 RepID=UPI00140B36E5) HSP 1 Score: 190 bits (483), Expect = 7.660e-57 Identity = 93/120 (77.50%), Postives = 109/120 (90.83%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEEFQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLPE 360
Y++IEN++DNEYL+NFKSF+Y QN+NY NLL Y+DS++FQV ++GHSCGLSDRTLLNTIFEH NC SIKVFYHQKDDG+D +TEIVQNISRHFN KKLMREKIVNK+L KPLPQ QLP+
Sbjct: 293 YKVIENINDNEYLRNFKSFQYLQNNNYDNLLRYVDSDKFQVLILGHSCGLSDRTLLNTIFEHDNCRSIKVFYHQKDDGTDIYTEIVQNISRHFNKKKLMREKIVNKTLCKPLPQI-QLPK 411
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: A0A4R5FPL1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium sp. GT3P67 TaxID=2541722 RepID=A0A4R5FPL1_9FLAO) HSP 1 Score: 189 bits (481), Expect = 9.410e-57 Identity = 90/120 (75.00%), Postives = 113/120 (94.17%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSE-EFQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLP 357
Y++IEN+DDNEYL+NFKSF+Y Q+SNYK+LLD+++S+ +FQV++MGHSCGLSDRT+LNTIFEH NC+SIKVFYHQ++DG+DN+TEI+QNISRHFN KKLMREKIVNK+L +PLPQ QLP
Sbjct: 274 YKMIENIDDNEYLRNFKSFQYLQSSNYKSLLDFVESDRKFQVYIMGHSCGLSDRTMLNTIFEHPNCISIKVFYHQREDGTDNYTEIIQNISRHFNKKKLMREKIVNKTLCEPLPQM-QLP 392
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: UPI001C5B5E2C (bacteriophage abortive infection AbiH family protein n=1 Tax=Flavobacterium sp. NAS39 TaxID=2857508 RepID=UPI001C5B5E2C) HSP 1 Score: 190 bits (482), Expect = 1.080e-56 Identity = 92/120 (76.67%), Postives = 111/120 (92.50%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEE-FQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQNNQLP 357
Y++IENLDDNEYLKNFKSF+Y QNSNYK LLD+++S++ FQV++MGHSCGLSDRT+LNTIFEH NC SIKVFYHQ++DG+DN+TEI+QNISRHFN KKLMREKIVNK+L +PLP+ QLP
Sbjct: 294 YKMIENLDDNEYLKNFKSFQYLQNSNYKQLLDFVESDQKFQVYIMGHSCGLSDRTMLNTIFEHPNCRSIKVFYHQREDGTDNYTEIIQNISRHFNKKKLMREKIVNKTLCQPLPKI-QLP 412
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: A0A0N0ZUE7_9FLAO (Uncharacterized protein n=2 Tax=Chryseobacterium indologenes TaxID=253 RepID=A0A0N0ZUE7_9FLAO) HSP 1 Score: 181 bits (459), Expect = 2.230e-56 Identity = 82/115 (71.30%), Postives = 101/115 (87.83%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEEFQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQN 345
Y+++EN DN +LKN KSF Y NSNY+NLL++I+S +FQ+F+MGHSCGLSDRTLLNT+FEH NC SIK+FYHQKDDG+DNFTE+ QNISRHFN K +MREK+V+KS+ KPLPQN
Sbjct: 37 YKILENTGDNAFLKNIKSFMYFNNSNYRNLLNWIESNDFQIFIMGHSCGLSDRTLLNTLFEHNNCKSIKIFYHQKDDGTDNFTELSQNISRHFNKKSMMREKVVDKSISKPLPQN 151
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Match: UPI001B3205C9 (AbiH family protein n=1 Tax=Flavobacterium flabelliforme TaxID=2816119 RepID=UPI001B3205C9) HSP 1 Score: 189 bits (479), Expect = 2.820e-56 Identity = 85/114 (74.56%), Postives = 108/114 (94.74%), Query Frame = 1
Query: 1 YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEEFQVFVMGHSCGLSDRTLLNTIFEHKNCLSIKVFYHQKDDGSDNFTEIVQNISRHFNNKKLMREKIVNKSLYKPLPQ 342
Y++IEN++DNEYL+NFKSF Y QNSNYK+LLD+I++++FQ+++MGHSCGLSDRTLLNT+FEH NC SIKVFYH+++DG+DN+TEI+QNISRHFN KKLMREKIVNK+L +PLPQ
Sbjct: 291 YKIIENINDNEYLRNFKSFLYLQNSNYKSLLDFIENDKFQIYIMGHSCGLSDRTLLNTVFEHDNCRSIKVFYHEREDGTDNYTEIIQNISRHFNKKKLMREKIVNKTLCQPLPQ 404 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16980.3903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig16980.3903.1 >prot_E-siliculosus-1a_F_contig16980.3903.1 ID=prot_E-siliculosus-1a_F_contig16980.3903.1|Name=mRNA_E-siliculosus-1a_F_contig16980.3903.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=123bp YRLIENLDDNEYLKNFKSFKYSQNSNYKNLLDYIDSEEFQVFVMGHSCGLback to top mRNA from alignment at E-siliculosus-1a_F_contig16980:2..370+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig16980.3903.1 ID=mRNA_E-siliculosus-1a_F_contig16980.3903.1|Name=mRNA_E-siliculosus-1a_F_contig16980.3903.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=369bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16980:2..370+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16980:2..370+ >mRNA_E-siliculosus-1a_F_contig16980.3903.1 ID=mRNA_E-siliculosus-1a_F_contig16980.3903.1|Name=mRNA_E-siliculosus-1a_F_contig16980.3903.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=738bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16980:2..370+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |