mRNA_E-siliculosus-1a_F_contig16921.3885.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: A0A7Y3F341_9FLAO (Uncharacterized protein n=2 Tax=Eudoraea TaxID=446680 RepID=A0A7Y3F341_9FLAO) HSP 1 Score: 94.7 bits (234), Expect = 1.450e-24 Identity = 45/56 (80.36%), Postives = 51/56 (91.07%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKTILL+KEIY +GF+NLGN +VK+YFK FAWFSF MF IVLYAL+YRISTGFAFD
Sbjct: 1 MKTILLIKEIYKEGFRNLGNIMVKKYFKAFAWFSFIMFFIVLYALIYRISTGFAFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: UPI0015626387 (hypothetical protein n=1 Tax=Kriegella sp. EG-1 TaxID=2664451 RepID=UPI0015626387) HSP 1 Score: 94.7 bits (234), Expect = 1.450e-24 Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKTILL+KEIYA+GFKNLGN I+K +FKFFAWFSF MFVIV+YA ++R+STGF FD
Sbjct: 1 MKTILLIKEIYAEGFKNLGNLIIKNFFKFFAWFSFIMFVIVVYAFIFRVSTGFPFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: UPI001939F14E (hypothetical protein n=1 Tax=Aurantibacter crassamenti TaxID=1837375 RepID=UPI001939F14E) HSP 1 Score: 93.6 bits (231), Expect = 4.170e-24 Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKT+LL+KEIY +GFKNLGN IVK+YFKFFAWFSF MF IVLYA ++R+STGF F+
Sbjct: 1 MKTVLLIKEIYTEGFKNLGNLIVKKYFKFFAWFSFIMFAIVLYAFIFRVSTGFPFE 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: A0A1G9KHI7_9FLAO (Uncharacterized protein n=1 Tax=Kriegella aquimaris TaxID=192904 RepID=A0A1G9KHI7_9FLAO) HSP 1 Score: 91.7 bits (226), Expect = 2.420e-23 Identity = 40/56 (71.43%), Postives = 51/56 (91.07%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKT+LLL+E+Y +GFKNLG+ I+K+YFK FAWF+FAMF IVLYA +YR++TGFAFD
Sbjct: 1 MKTVLLLREVYIEGFKNLGSLIIKKYFKVFAWFAFAMFFIVLYAFIYRVATGFAFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: UPI0018E99C59 (hypothetical protein n=1 Tax=Robiginitalea sediminis TaxID=1982593 RepID=UPI0018E99C59) HSP 1 Score: 90.1 bits (222), Expect = 9.860e-23 Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
M T+LL+KEIY +GF+NLG+F+VKRYFK FAWFSFAMF++VLYA YR++TGF FD
Sbjct: 1 MNTLLLIKEIYLNGFRNLGHFLVKRYFKIFAWFSFAMFLVVLYAFTYRLATGFPFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: UPI001EE9E424 (hypothetical protein n=1 Tax=Poritiphilus flavus TaxID=2697053 RepID=UPI001EE9E424) HSP 1 Score: 90.1 bits (222), Expect = 9.860e-23 Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKTI+LLKEIY DGFKNLG+++VK YFK FAWFSF MF +VLYA V+R+ TGFAFD
Sbjct: 1 MKTIVLLKEIYLDGFKNLGSYLVKNYFKAFAWFSFMMFFVVLYAFVFRVFTGFAFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: UPI001455FC5A (hypothetical protein n=7 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001455FC5A) HSP 1 Score: 89.7 bits (221), Expect = 1.400e-22 Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MK +LL+KEIY +GF+NLG+FI+++YFK FAWFSF MF IVLYA VYRI+TGFAFD
Sbjct: 1 MKKLLLVKEIYLEGFRNLGHFIIEKYFKIFAWFSFVMFFIVLYAFVYRIATGFAFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: UPI0018E922F9 (hypothetical protein n=1 Tax=Robiginitalea sediminis TaxID=1982593 RepID=UPI0018E922F9) HSP 1 Score: 89.7 bits (221), Expect = 1.400e-22 Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKT+LL+KEIY D FKNLGN IV+ YF+ FAWFSFAMF++VLYA V+RISTGF FD
Sbjct: 1 MKTLLLVKEIYLDAFKNLGNLIVRNYFRAFAWFSFAMFLVVLYAFVFRISTGFPFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: A0A316DWL3_9FLAO (Uncharacterized protein n=1 Tax=Maribacter polysiphoniae TaxID=429344 RepID=A0A316DWL3_9FLAO) HSP 1 Score: 89.4 bits (220), Expect = 1.990e-22 Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MKT LL+K+IY +GF+NLG+ +VK YFK FAWFSFAMF IVLYA VYR+STGFAFD
Sbjct: 1 MKTTLLIKKIYEEGFRNLGHLMVKNYFKVFAWFSFAMFFIVLYAFVYRVSTGFAFD 56
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Match: A0A6G7J737_9FLAO (Uncharacterized protein n=11 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A6G7J737_9FLAO) HSP 1 Score: 89.0 bits (219), Expect = 2.830e-22 Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISTGFAFD 168
MK +LL+KEIY +GF+NLG+ IV++YFKFFAWFSF MF IVLYA VYR++TGFAFD
Sbjct: 1 MKKLLLVKEIYIEGFRNLGHIIVEKYFKFFAWFSFVMFFIVLYAFVYRMATGFAFD 56 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16921.3885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig16921.3885.1 >prot_E-siliculosus-1a_F_contig16921.3885.1 ID=prot_E-siliculosus-1a_F_contig16921.3885.1|Name=mRNA_E-siliculosus-1a_F_contig16921.3885.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=57bp MKTILLLKEIYADGFKNLGNFIVKRYFKFFAWFSFAMFVIVLYALVYRISback to top mRNA from alignment at E-siliculosus-1a_F_contig16921:458..628+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig16921.3885.1 ID=mRNA_E-siliculosus-1a_F_contig16921.3885.1|Name=mRNA_E-siliculosus-1a_F_contig16921.3885.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=171bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16921:458..628+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16921:458..628+ >mRNA_E-siliculosus-1a_F_contig16921.3885.1 ID=mRNA_E-siliculosus-1a_F_contig16921.3885.1|Name=mRNA_E-siliculosus-1a_F_contig16921.3885.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=342bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16921:458..628+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |