mRNA_E-siliculosus-1a_F_contig169.3865.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI) HSP 1 Score: 505 bits (1301), Expect = 5.730e-171 Identity = 241/243 (99.18%), Postives = 243/243 (100.00%), Query Frame = 3
Query: 138 MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILVTPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCKEW 866
MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVIL+TPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIY+SSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCKEW
Sbjct: 1 MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCKEW 243
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI) HSP 1 Score: 181 bits (460), Expect = 7.940e-48 Identity = 101/231 (43.72%), Postives = 141/231 (61.04%), Query Frame = 3
Query: 141 GGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILVTPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSG-GVKVEPPKEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIG 830
G Y Q RA WA +Y L W+L RL C+ GLP C+L PL+VLT L+VL FSLAQA++CEI+ + RF +L + +++ + +S L R L R E +D + + IF+ LI V+++ HFA AW LPG L+SG GV +EDL IY +SR++I+A+ IL+ +F ++ DDG+ Y+ LLAW+LSL A F +S WL V TG+FLQGIG
Sbjct: 33 GAYVEQATRATGWAVMYILGWLLMRLSCYAGLPGDCNLPDEPLEVLTVLLVLLVFSLAQAWFCEIMEERRFRDLASKVYFPLLMVGAALALSGLSRAESL-RNSLQEERRDL--TTFQVAIFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIG 260
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI) HSP 1 Score: 180 bits (456), Expect = 9.010e-47 Identity = 98/239 (41.00%), Postives = 138/239 (57.74%), Query Frame = 3
Query: 147 YEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILVTPIIISALGRIGGLERWDKD---NEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPP-KEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 851
Y Q KRA W L L W+ QRL CH LP HCDL L+VLTDL+ L F L QA++CE+L + RF L + + VI+V +I+SA+ W +D N+ D+ S + + + + + VA+HFA AW TLPG +SG + ++ +E+LH IY SR +I+++ +L+ +F E DG LLAW+LSL A F S IWL + TG+F+QG G+ RLRFL
Sbjct: 32 YIEQAKRAAAWIGLLLLCWLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGIVIIVIGLIVSAIETTD----WFQDMRFNDNSDWRDSHIVMAVVLITFVLVI--VAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRFL 264
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: A0A6H5JIF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIF9_9PHAE) HSP 1 Score: 141 bits (355), Expect = 5.510e-34 Identity = 85/240 (35.42%), Postives = 131/240 (54.58%), Query Frame = 3
Query: 165 RALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQA---YWCEILLDDRFEELKKAPWIFGVILVTPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGI--------YASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 851
+A +W + Y L W+L ++ C L P + A +PLDVLT+L L F+L QA + C+ L +RF L K ++ V++ + I SAL + G + +G + + ST+ V IA L +HF AW TLPG ++SGGV P++ + Y ++ +++ A+ L +F+ D ++Y LLAW++SLIA+F P S +WLGV TG FLQG+GA +FL
Sbjct: 12 KAAVWFSFYVLCWLLMQVSCELEPPGNYRWACQPLDVLTELPFLLAFALGQATTAFLCDTLDSERFHSLSKERYLPVVVVGSGITTSALTKNDGFVDTHEIEDGMTTAVNVV-STLLV---IAVGLAFVYHFFVAWTTLPGAVMISGGVST--PEDATAPVRSGNRFARYMATAVLVAAFVALNAAFVHRRGDNWNYHYTLLAWVMSLIAIFDDPFSVVWLGVTTGAFLQGVGAYSFQFL 245
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE) HSP 1 Score: 133 bits (335), Expect = 5.680e-31 Identity = 84/239 (35.15%), Postives = 124/239 (51.88%), Query Frame = 3
Query: 156 QNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILVTPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQL----LSGGVKVEPPK---EDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 851
Q +A W Y + L C +G+P++C A +DVLT+L LF F+ A+ C IL R+ L K + +++ + + SAL G E + G D S + + + LI L+ A+H+ AW LPG L +SG V PP E+ + Y +S VI+ + +LF++F S D +DY LLAW++SLIA F +S WLG+ TG+FLQG+GA R L
Sbjct: 43 QGVKAASWVGFYIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSKKMYFPVLVIASGLATSALMNNDGFE--GLHDPGGDL--SPAEAALSIILLILVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 274
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 4.630e-19 Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 3
Query: 477 EFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQL----LSGGVKVEPPK---EDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 851
E S + + + L+ L+ A+H+ AW LPG L +SG V PP E+ + Y +S VI+ + +LF++F S D +DY LLAW++SLIA F +S WLG+ TG+FLQG+GA R L
Sbjct: 15 ELSPAEAALSIILLVLVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 146
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: C5L8A4_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L8A4_PERM5) HSP 1 Score: 63.5 bits (153), Expect = 6.340e-7 Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = 3
Query: 282 DLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGV--------ILVTPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFII--------SEDDG---FDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGA 833
+L L F + QA++ E++ DD K++ WIF + + + LG + L G ++A S + F LL+ WH + +KV P D +Y SR+ ++ CI +F++ DD F +AW+LSLIA F HP+S + L + +GIF+QGI A
Sbjct: 130 NLANLAMFGIIQAWFVEVI-DDP----KRSKWIFSLRRWWFFITFFAASTVFTLLGMLDVLSHSSISPSGHLDNWNAF-SIVLTFLASFLALLIIWHVVYS-------------IKVLPTYADA-AVYIISRVGVV--CIFGITFLLIHYDDKYNKHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLLMLSITSGIFVQGIAA 310
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Match: A0A7J6NSF0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NSF0_PEROL) HSP 1 Score: 64.7 bits (156), Expect = 6.880e-7 Identity = 69/274 (25.18%), Postives = 107/274 (39.05%), Query Frame = 3
Query: 81 PVGEEPKSRAPKESKSYCTMGGY----EGQNKRALIWAALYFLAWILQRLWCH-LGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFG--------VILVTPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFII-------SEDDG---FDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGA 833
P+ + K + +E SY +G + L W L + R +C +P D L T+L L F + QA++ E++ DD K++ WIF + + LG + L G ++A ST+ WH W + +KV P D +Y SR ++ C +F++ + DD F +AW+LSLIA F HP+S I L + +GIF+QGI A
Sbjct: 393 PLSADSKWKRRREVSSYSAIGPLVTPSSSSDDGVLRWLLLLVAGYAYNRFFCEKYNIPRDSD-RYTYLGHSTNLANLAMFGIIQAWFVEVI-DDP----KRSKWIFSFPRWWFFITFFAASTVFTLLGMLDALSHNSISPSGHLDRWNAF-STVLTXXXXXXXXXXXWH---VWYS----------IKVLPTYPDA-AVYILSRFGVV--CTFGVTFLLIHFDDEHNHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLIMLAITSGIFVQGIAA 643 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig169.3865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig169.3865.1 >prot_E-siliculosus-1a_F_contig169.3865.1 ID=prot_E-siliculosus-1a_F_contig169.3865.1|Name=mRNA_E-siliculosus-1a_F_contig169.3865.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=244bp MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLback to top mRNA from alignment at E-siliculosus-1a_F_contig169:40839..46504- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig169.3865.1 ID=mRNA_E-siliculosus-1a_F_contig169.3865.1|Name=mRNA_E-siliculosus-1a_F_contig169.3865.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5666bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig169:40839..46504- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig169:40839..46504- >mRNA_E-siliculosus-1a_F_contig169.3865.1 ID=mRNA_E-siliculosus-1a_F_contig169.3865.1|Name=mRNA_E-siliculosus-1a_F_contig169.3865.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1464bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig169:40839..46504- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |