mRNA_E-siliculosus-1a_F_contig1684.3834.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A6H5KYT8_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYT8_9PHAE) HSP 1 Score: 574 bits (1480), Expect = 3.060e-201 Identity = 282/289 (97.58%), Postives = 286/289 (98.96%), Query Frame = 3
Query: 87 MKRPAPSTVPAMFAAAVAAGALMPGTLAFVASPNVMITGTQQRLPSRLGQPATSRHESLSMSASPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVEREASDSAGFFEGFADMFGMVGRGDPFCAVVATKEG 953
MKRPAP TVPAMFA AVAAGALMPGTLAFVASPNV+ITGTQQRLPSRLGQPATSRHESLSMS SPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLD+MSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVS+YFNAAGGFGPPEVVEREASDSAGFFEGFADMFGMVG+GDPFCAVVATKEG
Sbjct: 1 MKRPAPYTVPAMFAVAVAAGALMPGTLAFVASPNVIITGTQQRLPSRLGQPATSRHESLSMSVSPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDMMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSDYFNAAGGFGPPEVVEREASDSAGFFEGFADMFGMVGKGDPFCAVVATKEG 289
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A835YM46_9STRA (Methyltransferase type 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM46_9STRA) HSP 1 Score: 265 bits (678), Expect = 3.850e-81 Identity = 139/241 (57.68%), Postives = 170/241 (70.54%), Query Frame = 3
Query: 258 SLSMSASPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNA------AG---GFGPPEVVEREASDSAGFFEGFA-DMFGMVGRGDPFCAVVATKE 950
S + + +P + VL++ +R K + PD +Y PR+ +HVD F LT+LYRERIPAGG VLD+MSSWVSHLP +V Y +VDGHG+N EEL RNP+L RV DLNA+P LPF+ YDAVVC VSVQYLQQPE +F DV RVLKPGGVAIFSFSNRMF +KAI WI+R GRA LVS+YF + AG GF PEV+ ++AS AG F FA ++ G+ GDPF AVVA K+
Sbjct: 2 SAASTGTPPVQPVLSESDRRKYDTAPDAYWYNTPRLVFHVDSSFTSKLTDLYRERIPAGGTVLDMMSSWVSHLPSDVRYAQVDGHGLNREELQRNPQLTDIRVQDLNADPYLPFDSEQYDAVVCAVSVQYLQQPERIFGDVYRVLKPGGVAIFSFSNRMFGNKAITAWIDRDDAGRAALVSSYFRSVQPVGEAGSPQGFTEPEVIMKDAS-IAGIFASFAREVVGLNVGGDPFIAVVAYKD 241
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A0D3CNC6_BRAOL (Methyltransf_11 domain-containing protein n=7 Tax=Brassiceae TaxID=981071 RepID=A0A0D3CNC6_BRAOL) HSP 1 Score: 250 bits (638), Expect = 9.570e-75 Identity = 124/224 (55.36%), Postives = 152/224 (67.86%), Query Frame = 3
Query: 288 KLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVEREASDSAG----FFEGFADMFGMVGRGDPFCAVVATK 947
+LVLN+ RTKLN GPD FY YPR HVD+GF+ LT+LYR R+ +G VLD+MSSWVSHLP EV YERV GHG+N +EL RNPRLD V DLN + +L F+D +DAV+C+V VQYLQQPE VFA+V RVLKPGG I SFSNRMF +KAI+ W + T GR +LV YF + GF PE + ++ G F + G+ R DPF AV+A K
Sbjct: 48 RLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYERVVGHGLNAQELARNPRLDYFFVKDLNEDQKLEFQDKYFDAVLCSVGVQYLQQPEKVFAEVYRVLKPGGALIVSFSNRMFYEKAIRVWRDGTEYGRVQLVVQYFQSVQGFTQPETIRQQPPPGGGAEKPVLNWFMGLIGLASRPDPFNAVIAYK 271
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A7I8KDQ2_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KDQ2_SPIIN) HSP 1 Score: 248 bits (632), Expect = 7.570e-74 Identity = 127/219 (57.99%), Postives = 147/219 (67.12%), Query Frame = 3
Query: 288 KLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVER-EASDSAGFFEGFADMFGMVGRGDPFCAVVA 941
+LVL R+KLN PD FY +PR HVDEGFLK LT+LY ERIP GG V D+MSSWVSHLP EV Y RV GHG+N +EL RNPRL++ V DLN E L E ++DAVVCTVSVQYLQ PE VFA+V RVLKPGGV I SFS+RMF +KAI W + T R +LV YF GF PEV+ R +S + A + G R DPFCAVVA
Sbjct: 55 RLVLTPDGRSKLNPTPDRDFYAFPRFVKHVDEGFLKELTKLYLERIPEGGDVFDLMSSWVSHLPEEVPYRRVVGHGLNAQELARNPRLESFFVKDLNREQELALESCSFDAVVCTVSVQYLQWPEKVFAEVLRVLKPGGVCIISFSDRMFYEKAIAAWRDGTTYSRTQLVVQYFQCVEGFTQPEVIRRLPRQESRSVLQSIASLLGYS-RSDPFCAVVA 272
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A2C9UH92_MANES (Methyltransf_11 domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UH92_MANES) HSP 1 Score: 247 bits (630), Expect = 1.920e-73 Identity = 127/249 (51.00%), Postives = 160/249 (64.26%), Query Frame = 3
Query: 216 LPSRLGQPATSRHESLSMSASPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVER-----EASDSAGFFEGFADMFGMVGRGDPFCAVVATK 947
LP+++ E+ SA +LVL RTKLN PD FY YP+ HVD+GF+ LT LYRER+ G +LD+MSSWVSHLP EV+Y+RV GHG+N +EL RNPRLD V DLN + +L FE A++DAV+CTVSVQYLQQPE VFA+V RVL+PGGV I SFSNRMF +KAI W T RA+LV YF + GF PE+V + A + + + G++ DPF AV+A K
Sbjct: 32 LPAKISYSLNENKETQQSSAGKIKRLVLTQEGRTKLNTYPDREFYAYPKFVTHVDDGFISTLTNLYRERLSPGSEILDLMSSWVSHLPKEVSYKRVVGHGLNAQELARNPRLDYFFVKDLNQDQKLEFESASFDAVICTVSVQYLQQPEKVFAEVFRVLRPGGVFIVSFSNRMFYEKAIGAWREGTGYSRAQLVVQYFQSVEGFTQPEIVRKLPPSGGAQEDKSALKWLMGLLGLLSGSDPFYAVIAYK 280
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A5C7HCB0_9ROSI (Methyltransf_11 domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HCB0_9ROSI) HSP 1 Score: 246 bits (628), Expect = 3.910e-73 Identity = 124/248 (50.00%), Postives = 159/248 (64.11%), Query Frame = 3
Query: 219 PSRLGQPATSRHESLSMSASPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVER-----EASDSAGFFEGFADMFGMVGRGDPFCAVVATK 947
P+++ +E+ SA + VL RTKLN PD FYGYPR+ HVD+GF+ LT++YR+R G +LD+MSSWVSHLP E Y+RV GHG+N +EL +NPRLD V DLN + RL FED ++DAV+CTVSVQYLQ PE VFA+VCRVLKPGGV I SFSNRMF +KAI W + TA R +LV YF + GF PE+V + + F + G++ DPF A++A K
Sbjct: 34 PTKISNTLNDNNETRESSAGRIKRDVLTKEGRTKLNSYPDREFYGYPRLVTHVDDGFISTLTDIYRQRFRPGSEILDLMSSWVSHLPKEAKYKRVVGHGLNAQELAKNPRLDYFFVKDLNQDQRLEFEDGSFDAVLCTVSVQYLQYPEKVFAEVCRVLKPGGVFIVSFSNRMFYEKAISAWRDGTAYSRVQLVVQYFQSVEGFTQPEIVRKLPGAGAVEEQKSPFTWIMKLLGLLSGSDPFYAIIAYK 281
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: D7L9M5_ARALL (Methyltransf_11 domain-containing protein n=3 Tax=Camelineae TaxID=980083 RepID=D7L9M5_ARALL) HSP 1 Score: 245 bits (626), Expect = 4.930e-73 Identity = 124/228 (54.39%), Postives = 149/228 (65.35%), Query Frame = 3
Query: 264 SMSASPGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVEREASDSAGFFEGFADMFGMVGRGDPFCAVVATK 947
S SA +LVLN+ RTKLN PD FY YPR HVD+GF+ LTELYR R+ G VLD+MSSWVSHLP EV YE+V GHG+N +EL RNPRLD V DLN + + FED +DAV+C V VQYLQQPE VFA+V RVLKPGGV I SFSNRMF +KAI+ W + T R +LV YF + GF PE++ ++ G+ R DPF AV+A K
Sbjct: 40 SSSAGKVQRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDGFISSLTELYRNRLRPGSIVLDLMSSWVSHLPEEVKYEKVVGHGLNAQELARNPRLDYFFVKDLNEDEKFEFEDKYFDAVLCAVGVQYLQQPEKVFAEVYRVLKPGGVLIVSFSNRMFYEKAIRVWRDGTEYSRIQLVVQYFQSIEGFTQPEIIRQQPGAQISVMTRLMGFIGLASRPDPFNAVIAYK 267
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A6D2JQ04_9BRAS (Methyltransf_11 domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JQ04_9BRAS) HSP 1 Score: 245 bits (625), Expect = 7.380e-73 Identity = 122/224 (54.46%), Postives = 149/224 (66.52%), Query Frame = 3
Query: 288 KLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVEREASDSAG----FFEGFADMFGMVGRGDPFCAVVATK 947
+LVLN+ RTKLN PD FY YPR HVD+ F+ LT+LYR R+ G VLD+MSSWVSHLP EV YE+V GHG+N +EL RNPRLD + DLN + + FED +DAV+C+V VQYLQQPE VFA+V RVLKPGG I SFSNRMF +KAIK W + T R +LV YF + GF PE++ ++ G F F + G+ R DPF AVVA K
Sbjct: 46 RLVLNNEGRTKLNADPDREFYSYPRFVNHVDDSFISSLTDLYRNRVRPGSIVLDLMSSWVSHLPDEVKYEKVVGHGLNAQELARNPRLDYFFIKDLNEDQKFEFEDKYFDAVLCSVGVQYLQQPEKVFAEVYRVLKPGGALIVSFSNRMFYEKAIKVWRDGTEYSRVQLVVQYFQSIEGFTQPEIIRQQPPGQGGAEKPVFNWFLSVIGLASRPDPFNAVVAYK 269
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A6P0TA67_9CYAN (Class I SAM-dependent methyltransferase n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TA67_9CYAN) HSP 1 Score: 242 bits (618), Expect = 9.880e-73 Identity = 120/219 (54.79%), Postives = 149/219 (68.04%), Query Frame = 3
Query: 297 LNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVEREASDSAGFFEGFADMFGMVGRGDPFCAVVATKEG 953
+N +RTKL++ D LFY YPR HVD+GF+K LT+LYR+R+ +LD+MSSWVSHLP +V + V GHGMN EEL RNPRLD V +LN EP LPF D +DAV+ VSVQYLQQPE +FA++ RVLKPGG+AI SFSNRMF KAI+ W + T + R LV YF + GFG PE + ++S SA M GM G DPF AV+A + G
Sbjct: 1 MNPTQRTKLDEADDSLFYDYPRFVTHVDDGFIKQLTDLYRDRLTPNTDILDMMSSWVSHLPDDVEFASVTGHGMNQEELARNPRLDRYVVQNLNQEPTLPFADQQFDAVLNAVSVQYLQQPETIFAEIHRVLKPGGIAIISFSNRMFYQKAIQAWRDGTERQRVALVQKYFRSVAGFGVPEAIAHQSSTSA-----ILQMLGMGG--DPFYAVLAQRLG 212
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Match: A0A0E0KRZ1_ORYPU (Methyltransf_11 domain-containing protein n=14 Tax=Oryza TaxID=4527 RepID=A0A0E0KRZ1_ORYPU) HSP 1 Score: 244 bits (622), Expect = 1.580e-72 Identity = 123/223 (55.16%), Postives = 152/223 (68.16%), Query Frame = 3
Query: 288 KLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDIMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSNYFNAAGGFGPPEVVEREASDSAGF-----FEGFADMFGMVGRGDPFCAVVA 941
+LVL R KL+ PD FY +PR+ HVD+GFL LT+LYR+R+ G VLD+MSSWVSHLPPE+T RV GHG+N +EL +NPRLD V DLN E +L E +++DAV+CTVSVQYLQ PE VFA++ RVLKPGGV I SFSNRMF +KAI W TA R +LV+ YF GF PEVV + SD+AG + +FGM G DPF AV++
Sbjct: 39 RLVLTPEGRAKLDARPDRDFYAFPRLVKHVDDGFLAALTDLYRDRLRPGWDVLDLMSSWVSHLPPELTLRRVVGHGLNAQELAKNPRLDYFFVKDLNKEQQLELETSSFDAVLCTVSVQYLQSPEKVFAEIFRVLKPGGVCIVSFSNRMFYEKAIGAWREGTAYSRVQLVTQYFQCVDGFTQPEVVRKLPSDAAGGKPASPLDAVMRLFGMAGSSDPFYAVIS 261 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1684.3834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1684.3834.1 >prot_E-siliculosus-1a_F_contig1684.3834.1 ID=prot_E-siliculosus-1a_F_contig1684.3834.1|Name=mRNA_E-siliculosus-1a_F_contig1684.3834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=308bp MFDPLLVQGSGLLPQDKSMKRPAPSTVPAMFAAAVAAGALMPGTLAFVASback to top mRNA from alignment at E-siliculosus-1a_F_contig1684:7234..17339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1684.3834.1 ID=mRNA_E-siliculosus-1a_F_contig1684.3834.1|Name=mRNA_E-siliculosus-1a_F_contig1684.3834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10106bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1684:7234..17339+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1684:7234..17339+ >mRNA_E-siliculosus-1a_F_contig1684.3834.1 ID=mRNA_E-siliculosus-1a_F_contig1684.3834.1|Name=mRNA_E-siliculosus-1a_F_contig1684.3834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1848bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1684:7234..17339+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |