mRNA_E-siliculosus-1a_F_contig1672.3771.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1672.3771.1
Unique NamemRNA_E-siliculosus-1a_F_contig1672.3771.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: D7G2N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N9_ECTSI)

HSP 1 Score: 1169 bits (3023), Expect = 0.000e+0
Identity = 753/815 (92.39%), Postives = 765/815 (93.87%), Query Frame = 1
Query:    1 MDVGGDAHAQEEVEDDPIPNELDNALVHLLPAIKACGSDPSLPTYLDLAKFEELAGPVLREGAVSEGGTGGGTGDDGGGRRRLDERVSGEIQVAFRHCMHEAGLALAGLDVGGGRGGKGGRKAAAEGPGSAAALSGSEPMAEPMGILSLALAFVANEAGLDKSDGDG-SRSINQVLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSRLVPVNNGRYPLIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXG-RAAGAGVAPAPAAREVAEGESEKGGAVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRESFWTQWKDVNKCKLAITAAKEEETQREKDKAAGVVARAPSYPNKRPRPSASVAAGERAKYSPLGAGFPLEKMVSKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGGENPANLVGCYDGDLVKAMERLDKAQADAEAAAKAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTQPTKDEPTVDPPAAAEAAPAAEPVGGDSTAMAVDGEEEGRNVEVKKE 2439
            MDVGGD HAQEEVEDDPIPNELDNALVHLLPAIKACGSDPSLPTYLDLA FEELAGPVLREGAVSEGGTG     DGGG+R LDERVSGEIQVAFRHCMHEAGLALAGLDVGG            E PG AAALSGSEPMAEPMGILSLALAFVANEAGLDKSDG G S SINQVLTALPLLLLEDFMESQ R  + CKEFWSAWVEPNSERLSRLVP+NNGRYPLIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATK K+GANPQEF V YPLYRSFWRLQ+YPLQQDKVVKGEE K TWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X  X  RAAGA  APAPAAREVAEGESE+GG VYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQ+VLNRE+FWTQWKDVNKCKLA+TAAKEEETQREKDKAAGVVARAPSYPNKRPRPSASVAAGERAKYSPLGAGFPLE+MVSKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLG ENPANLVGCYDGDLVKAMERLDKAQADAEAAAKAAEE XXXXXXXXXXXXXXXXXXXXXXXXXXX    APTQPTK+EPT+DPPAAAEAAPAAEPVGGDSTAMAVDGEEEGRNVEVKKE
Sbjct:    1 MDVGGDPHAQEEVEDDPIPNELDNALVHLLPAIKACGSDPSLPTYLDLATFEELAGPVLREGAVSEGGTG----KDGGGKRCLDERVSGEIQVAFRHCMHEAGLALAGLDVGGAGXXXXXXXXXXE-PGGAAALSGSEPMAEPMGILSLALAFVANEAGLDKSDGGGDSWSINQVLTALPLLLLEDFMESQGR--TACKEFWSAWVEPNSERLSRLVPLNNGRYPLIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ATKLKEGANPQEFAVHYPLYRSFWRLQEYPLQQDKVVKGEETKATWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGAAPAPAPAAREVAEGESEEGGPVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQVVLNRETFWTQWKDVNKCKLAMTAAKEEETQREKDKAAGVVARAPSYPNKRPRPSASVAAGERAKYSPLGAGFPLERMVSKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGRENPANLVGCYDGDLVKAMERLDKAQADAEAAAKAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXX----APTQPTKEEPTIDPPAAAEAAPAAEPVGGDSTAMAVDGEEEGRNVEVKKE 803          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A6H5KU96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU96_9PHAE)

HSP 1 Score: 739 bits (1909), Expect = 5.810e-252
Identity = 534/656 (81.40%), Postives = 550/656 (83.84%), Query Frame = 1
Query: 1015 ATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAPAAREVAEGESEKGGAVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRESFWTQWKDVNKCKLAITAAKEEETQREKDKAAGVVARAPSYPNKRPRPSASVAAGERAKYSPLGAGFPLEKMVSKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGGENPANLVGCYDGDLVKAMERLDKAQADAEAAAKAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTQPTKDEPTVDPPAAAEAAPAAEPVGGDSTAMAVDGEEEGRNVEVKKE-AAAASTSGEAAVPAVAVSADASXXXXXXXXXXXXXXXXXTTPAGDRADDNGLATDGAVVXXXXXXXXXXXXXXXXXXXXXXADAPTDPDGNGLAVTEGAAATAAVEGSXXXXXXXXXXXXXXXXXXS--EKTNAVADSTAPATDAGKEAVAEEAPAAVTAAAAEKPAPSPARVTRRSSKK 2973
            A+K+K  ANPQEF VDYPLYRSFWRLQ+YPLQQDKVVKGE AK TWEALLADVDK LGAFEAN+FSEHDLRLAREKWAADG            XXXXXXXXXXXXXXXXXXXXXX  X  X     A  APAPAAR+ AEGE+E GG VYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRE+FWTQWKDVNKCKLAITAA+EEE Q EKDKAAGVV RAPSYPNKRPRPSASVAA ERAKYSPLGA FPLEKM SKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLG ENPANLVGCYDGDLVKAMERLDKAQADAEAAAKAAEEAXXXXXXXXXXXXXXXXX     XXXXXXXXX PTQPTK+E TVDPP      PAA+PVGGDSTAMAVD EE+GRNV VKKE AA ASTSGEA VPA+ VSAD S            XXX   TPAGDRADDNGLA DG VV XXXXXXXXXXXXXXXXXXXXXADAPT+PDGNG+AVT+GAA        XXXXXXXXXXXXXXXXXX   EK NAVADSTAPATDAGKEA             A+K   SPARVTR SSKK
Sbjct:   50 ASKDKGSANPQEFAVDYPLYRSFWRLQEYPLQQDKVVKGEGAKATWEALLADVDKTLGAFEANSFSEHDLRLAREKWAADGGGCGGCGLSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAEAAPAPAARDGAEGETETGGPVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRETFWTQWKDVNKCKLAITAAEEEEAQMEKDKAAGVVPRAPSYPNKRPRPSASVAARERAKYSPLGADFPLEKMASKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGRENPANLVGCYDGDLVKAMERLDKAQADAEAAAKAAEEAXXXXXXXXXXXXXXXXXAAAEEXXXXXXXXXXPTQPTKEEATVDPPXXXXXXPAAQPVGGDSTAMAVDREEKGRNVAVKKEEAAGASTSGEAVVPALVVSADGSGAADAAAKATTAXXXADATPAGDRADDNGLAPDGTVVAXXXXXXXXXXXXXXXXXXXXXADAPTNPDGNGVAVTKGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPNAVADSTAPATDAGKEAXXXXXXXXXXXXXAQKSTLSPARVTRTSSKK 705          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A6H5KST9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KST9_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 2.170e-98
Identity = 178/198 (89.90%), Postives = 180/198 (90.91%), Query Frame = 1
Query:    1 MDVGGDAHAQEEVEDDPIPNELDNALVHLLPAIKACGSDPSLPTYLDLAKFEELAGPVLREGAVSEGGTGGGTGD----DGGGRRRLDERVSGEIQVAFRHCMHEAGLALAGLDVGGGRGGKGGRKAAAEGPGSAAALSGSEPMAEPMGILSLALAFVANEAGLDKSDGDGSRSINQVLTALPLLLLEDFMESQARRR 582
            MDV GDAHAQEE EDDPIPNELDNALVHLLPAIKACGS+PSLPTYLDLAKFEELAGPVLREGAVSEGGTG         DGGGRR LDERVSGEIQVAFRHCMHEAGLALAGLDVGGGR GKGGRKAAA GPG AAALSGSEPMAEPMGILSLALAFVANEAGLD+SDG GSRS NQVLTALPLLLLEDFMESQA RR
Sbjct:    1 MDVSGDAHAQEEAEDDPIPNELDNALVHLLPAIKACGSNPSLPTYLDLAKFEELAGPVLREGAVSEGGTGXXXXXXXXKDGGGRRCLDERVSGEIQVAFRHCMHEAGLALAGLDVGGGRVGKGGRKAAA-GPGGAAALSGSEPMAEPMGILSLALAFVANEAGLDESDGGGSRSTNQVLTALPLLLLEDFMESQAIRR 197          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A7S2W205_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W205_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.160e-32
Identity = 146/437 (33.41%), Postives = 191/437 (43.71%), Query Frame = 1
Query:  532 LPLLLLEDFMESQARRRS--------TCKEFWSAWVEPNSERLSRLVPVNNGRYPLIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAP-AAREVAEGESEKGGAVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLK---------NKVANAKDS----------PNSV-EDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC 1755
            LP LL ED ME+     S        + +  W+   E              G+  L+RLCN L +R+SKTHD+  CG++ MFL  A    ERSAVNV G +N  NVT F++ +       G D E E                XXXXXXXXXXX      XXXXX    A  + K + P  FV DY LY   W LQ++       +        W +    V  +L AFE  AF EH+L   R  +A+                                        G G      +   P +AR+ A G      + YFG KYLT+SRLLRLQL DP LRLQV TQ  +L A LK          + A  KD+          P+ V + + P +E   RL++ TPP G +Y  +++ +L RE  W  WKD +KC
Sbjct:  115 LPFLLFEDLMETSVLETSQDDPATSWSARRVWTLLEEYREPLTETPALFLKGKLVLLRLCNGLVRRLSKTHDTEWCGRVLMFLTSAYPLSERSAVNVKGEVNAANVTHFDEPD-------GADFERENGE------------EXXXXXXXXXXXAKGEAKXXXXXSESPAPLDAKPSKPNAFV-DYELYEHLWGLQRWMASPSLALS---TPAEWASFTETVAHVLRAFEFYAFHEHELEQGRLGYAS-------RRNASLPEHLRGTAPKLAMAPATDALSSDPSTPGGGEPKSMDLDTTPVSARKGASGGGTSDTSPYFGCKYLTTSRLLRLQLVDPQLRLQVTTQLWVLFAHLKAQAPAAFASGEAAAKKDAVLAAERVVLEPSRVNQTIDPLLERVARLMERTPPNGPQYSGLVEHILGREVSWRLWKDSHKC 521          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A484EG24_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG24_BRELC)

HSP 1 Score: 139 bits (351), Expect = 1.440e-30
Identity = 132/427 (30.91%), Postives = 178/427 (41.69%), Query Frame = 1
Query:  520 VLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSRLVP--VNNGRYP-----LIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREK-----WAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAPAAREVAEGESEKGGAVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLV---KATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC 1755
            ++ + P  +LED ME Q    STC++ W   +E    +L+         GR       L+R+CN L +R+SKTHDS  CG++ +FL       ERSAVN++G  N+ NVT FEDEE F  A        EAS G                                       +       P    +DY LYR+FW LQ +    +   +  E    WE    ++D +L AFE NAFS+ DL  +R        +ADG                                      G  RA            E++  E       +F  KYLT+SRL RLQLRDP LR  +LTQ+LIL     N +A AK    S+       +L +R+V   K TP  GE +  M+  VL RE  W +WK + KC
Sbjct:   98 LINSTPYKVLEDLMEGQTI--STCEKVWDL-LEARKVKLTAKPAFIAEKGRTTKASLCLLRMCNALLRRLSKTHDSVFCGKILLFLSFTFALSERSAVNLTGKANVTNVTAFEDEEAFDLA--------EASDGAKTADVVPKLEID--------------------------SDSSTDVGP----IDYNLYRTFWDLQTFCRDHELATRSME---NWEKFFTELDMVLAAFEGNAFSQDDLERSRNLSSGPIQSADGIMQTSDGN-----------------------------NGNCRA------------ELSSQEH------FFQPKYLTNSRLFRLQLRDPILRQCMLTQFLILF----NDLARAKPPAGSITSKAKLTDLTERVVALLKQTPFDGEGFNEMVSYVLERERNWVKWK-LEKC 428          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A8K1CPW4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW4_PYTOL)

HSP 1 Score: 137 bits (345), Expect = 8.220e-30
Identity = 157/558 (28.14%), Postives = 230/558 (41.22%), Query Frame = 1
Query:  520 VLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSR--LVP----VNNGRYPLIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAPAAREVAEGESEKGGAVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASL-KNKVANAKDSPNS-VEDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC----KLAITAAKEEETQREKDK---AAGVVARAPSYPNKRPRPSASVAAGERAKYSPLGAGFPLEKMVSKLRAGVPTSQEHLEDQRMCAEDPDTPASE--LPSASPLYTWRALRLLGGENPAN--LVGCYDGDLVKAM 2136
            +L +    +LED ME Q  +  TC++ W   +E   E+LS    +P           L+R+CN L +R+SKTH+S  CG++ +FL       ERSAVN+ G  N  N T FE+ + F  A        EAS                                        A +  K  +P    +DY LYR+FW LQ++        K  +    WE    +++ +L AFE NAFS  DL   RE     G                                               VA         +G  +     +F  KYLT+SRL RLQLRDP LR  +LTQ+LIL   L K K      +P S + +L+ R+    +L++ TP  G+ +  +L IVL RE  W +WK   KC    + A +A   +E   +K +   AA + AR P    KRP  S   A  E+           L+K+  + RA     ++++E +   A DP+    E   P    ++ WR LR+    N  +  L G   G ++K++
Sbjct:   98 LLNSAAYRVLEDLMEGQTIQ--TCEKLWDL-LEERKEKLSSPAFIPDAGRTTKASLCLLRMCNALLRRVSKTHNSVFCGRILVFLSFTFALSERSAVNLLGKPNTSNTTVFEEIDAFEAA--------EASDSAVPS----------------------------------AVELDKERDPDAVPIDYNLYRTFWDLQRFCRDHQLATKSAD---DWEKFFDELNTVLSAFEGNAFSRDDLERTRELLTGGGGS---------------------------------------------VAGDTDDESTVQGVQDH----FFQPKYLTNSRLFRLQLRDPILRECMLTQFLILFNHLSKAKQPEGCSTPKSKLSELQERVM---KLLRETPSDGKGFSELLSIVLERERNWIKWKQ-EKCPPYERSAASAEGPQEPAPKKRRLGDAAPLSAR-PPLGKKRPVDSGDSALMEQILSESAKPAVILQKIKEQDRATAVPMEKYVE-RFTEAWDPENGIEEEYWPDKDKMFCWRTLRMAMKTNIGHMHLAGSGAGAVIKSI 552          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A421GF71_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GF71_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.120e-29
Identity = 131/456 (28.73%), Postives = 181/456 (39.69%), Query Frame = 1
Query:  436 ILSLALAFVANEAGLDKSDGDGSRSINQVLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSRLVPVNNGRYP-----LIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFV--VDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAPAAREVAEGESEKGGAV------YFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLV---KATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC 1755
            +L L +A VAN+                ++ + P  +LED ME Q    STC++ W        +  +       GR       L+RLCN L +R+SKTH+S  CG++ +FL       ERSAVN++G  N+ NVT FED++ F  A    +  D   +                                           +  ++P   V  +DY LYR+FW LQ +  +     +  E    WE   A+++ +L AFE NAFS  DL  +R+   + G                                               +         AE ES K          +F  KYLT+SRL RLQLRDP LR  +LTQ+LIL     N +A AK    S        EL  R+V   K TP  GE +  M+  VL RE  W +WK   KC
Sbjct:   85 LLDLCIAGVANQ---------------YLVNSTPYKVLEDLMEGQTI--STCEKVWVLLESRKGKLTTSDFIAGPGRTTKASLCLLRLCNALLRRLSKTHNSVFCGKILLFLSFTFALSERSAVNLTGKANVTNVTMFEDQDAFDLA----ESTDAVKTSEIVPGL------------------------------------ELDSDPSADVGPIDYNLYRTFWDLQSFFREHQMATQSAE---NWEKFFAELNVVLAAFEGNAFSPDDLERSRDLMGSSGTP---------------------------------------------IHSPDVVMHEAESESSKNTMEQVAQEHFFQPKYLTNSRLFRLQLRDPILRECMLTQFLILF----NDLARAKPPMGSTTPKAKLAELNDRVVALLKQTPSDGEGFSEMVSYVLERERNWVKWKQ-EKC 430          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A0P1A7R2_PLAHL (Nuclear matrix protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7R2_PLAHL)

HSP 1 Score: 136 bits (343), Expect = 1.490e-29
Identity = 125/419 (29.83%), Postives = 178/419 (42.48%), Query Frame = 1
Query:  520 VLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSRLVPV-NNGRYP-----LIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPA-PAAREVAEGESEKGGAVYFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLVKATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC 1755
            ++ + P  +LED ME Q    STC++ W   +E   ++L+    +   GR       L+R+CN L +R+SKTH+S  CG++ MFL       ERSAVN++G  N+ NVT FEDE+ F +A        EA+                                          +   GA      +DY LYR+FW LQ +  +     +  E    WE L  +++ +L AFE NAFS  DL+  R + A +G                                             AG +P  P ++E            +F  KYLT+SRL RLQLRDP LR  +LTQ+LIL + +  ++    DS           +    L+K TP  GE Y  M+  VL RE  W +WK + KC
Sbjct:   98 LVNSTPYKILEDLMEGQTI--STCEKVW-VLLEIRKDKLTTPAFIAEKGRTTKASLCLLRMCNALLRRLSKTHNSVFCGRILMFLSFTFALSERSAVNLTGKANVTNVTVFEDEDAFDQA--------EATD--------------------------------VIKASALRLEIDSGATVDASPIDYNLYRTFWDLQSFFREHQLATQSVE---NWEKLFTELNMVLAAFEGNAFSPDDLK--RSEDANNGVNIKADVTLHAFDGD------------------------------AGKSPIEPISQEH-----------FFQPKYLTNSRLFRLQLRDPILRECMLTQFLILFSDMA-RIKPPADSTTPKAKFADLTDRVVALLKQTPSDGEGYSEMVSYVLERERNWVKWK-LEKC 425          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A3M6VEV3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEV3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 8.460e-29
Identity = 124/426 (29.11%), Postives = 179/426 (42.02%), Query Frame = 1
Query:  514 NQVLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSRLVP---VNNGRYP-----LIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAPAAREVAEGESEKGGAV-YFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLV---KATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC 1755
            N ++ + P  +LED ME Q    S C++ W   +E   ++L+  +P      GR       L+R+CN L +R+SKTH+S  CG++ +FL       ERSAVN++G  N+ NVT +EDE+ F  A       D A +                                             G  P    +DY LYR+FW LQ +  +   VV+  E    WE    +++ +L AFE N FS  DL  +R+                                              G      V    +  +  +  +E+G    +F  KYLT+SRL RLQLRDP +R  +LTQ+LIL     N +A AK    S+       +L++R+V   K TP  GE +  M+  VL RE  W +WK   KC
Sbjct:   96 NFLVNSTPYKVLEDLMEGQTI--SACEKVWEL-LESRKDKLT--MPDFIAEKGRTTKASLCLLRMCNALLRRLSKTHNSVFCGKILVFLSFTFALSERSAVNLTGKANVTNVTVYEDEDAFDLAETS----DAAKAAEVMPRLEIDSDL------------------------------STGVGP----IDYNLYRTFWNLQSFFREYQMVVQSAE---NWEKFFTELNVVLAAFEGNPFSPGDLERSRDI-------------------------------------------SGGPTHSTNVTMYESTNDTDKSATEQGSQEHFFQPKYLTNSRLFRLQLRDPIMRESMLTQFLILF----NDLARAKPPTGSITPKAKLADLSERVVALLKQTPSDGEGFSDMVAYVLERERNWVKWKQ-EKC 427          
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Match: A0A3F2RHS6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHS6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.060e-28
Identity = 132/456 (28.95%), Postives = 182/456 (39.91%), Query Frame = 1
Query:  436 ILSLALAFVANEAGLDKSDGDGSRSINQVLTALPLLLLEDFMESQARRRSTCKEFWSAWVEPNSERLSRLVPVNNGRYP-----LIRLCNKLAQRMSKTHDSSLCGQMHMFLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKEKKGANPQEFV--VDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEANAFSEHDLRLAREKWAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRXRGXGRAAGAGVAPAPAAREVAEGESEKGGAV------YFGLKYLTSSRLLRLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKRLV---KATPPRGEEYLSMLQIVLNRESFWTQWKDVNKC 1755
            +L L +A VAN+                ++ + P  +LED ME Q    STC++ W        +  +       GR       L+RLCN L +R+SKTH+S  CG++ +FL       ERSAVN++G  N+ NVT FED++ F  A    +  D   +                                           +  ++P   V  +DY LYR+FW LQ +  +     +  E    WE   A+++ +L AFE NAFS  DL  +R+   + G                                             A +  A      AE ES K          +F  KYLT+SRL RLQLRDP LR  +LTQ+LIL     N +  AK    S        EL  R+V   K TP  GE +  M+  VL RE  W +WK   KC
Sbjct:   85 LLDLCIAGVANQ---------------YLVNSTPYKVLEDLMEGQTI--STCEKVWVLLESRKGKLTTSDFIAGPGRTTKASLCLLRLCNALLRRLSKTHNSVFCGKILLFLSFTFALSERSAVNLTGKANVTNVTVFEDQDAFDLA----ESTDAVKTSEIVPGL------------------------------------ELDSDPSADVGPIDYNLYRTFWDLQSFFREHQMATQSAE---NWEKFFAELNVVLAAFEGNAFSPDDLERSRDLMGSSG---------------------------------------------APIHSADVVMHEAESESSKNTMEQVAQEHFFQPKYLTNSRLFRLQLRDPILRECMLTQFLILF----NDLTRAKPPVGSTTPKAKLAELNDRVVALLKQTPSDGEGFSEMVSYVLERERNWVKWKQ-EKC 430          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1672.3771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2N9_ECTSI0.000e+092.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU96_9PHAE5.810e-25281.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KST9_9PHAE2.170e-9889.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2W205_9STRA1.160e-3233.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A484EG24_BRELC1.440e-3030.91Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A8K1CPW4_PYTOL8.220e-3028.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A421GF71_9STRA1.120e-2928.73Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0P1A7R2_PLAHL1.490e-2929.83Nuclear matrix protein n=1 Tax=Plasmopara halstedi... [more]
A0A3M6VEV3_9STRA8.460e-2929.11Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A3F2RHS6_9STRA2.060e-2828.95Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1672contigE-siliculosus-1a_F_contig1672:10266..20964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2976
Model size3526
Exons13
Ec32 orthologEc-11_002920.1
Ec32 ortholog descriptionTHO complex, subunit THOC1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG2491@1,KOG2491@2759
EggNOG free text desc.negative regulation of isotype switching to IgA isotypes
GOsGO:0000160,GO:0000347,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006351,GO:0006354,GO:0006366,GO:0006368,GO:0006396,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009620,GO:0009719,GO:0009723,GO:0009725,GO:0009755,GO:0009873,GO:0009892,GO:0009987,GO:0010033,GO:0010267,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016246,GO:0016441,GO:0016458,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030422,GO:0031047,GO:0031050,GO:0031503,GO:0032774,GO:0032870,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035194,GO:0035556,GO:0040029,GO:0042221,GO:0042886,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043331,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0065007,GO:0070727,GO:0070887,GO:0070918,GO:0071166,GO:0071310,GO:0071359,GO:0071369,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0097659,GO:0098542,GO:1901360,GO:1901362,GO:1901576,GO:1901698,GO:1901699
KEGG ModuleM00405,M00406
KEGG Pathwayko03013,ko03040,map03013,map03040
KEGG koko:K12878
Seed eggNOG ortholog2880.D7G2N9
Seed ortholog evalue0.0
Seed ortholog score1177.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1672.3771.1prot_E-siliculosus-1a_F_contig1672.3771.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1672 10266..20414 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928171.244437-CDS-E-siliculosus-1a_F_contig1672:10265..108511622928171.244437-CDS-E-siliculosus-1a_F_contig1672:10265..10851Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 10266..10851 +
1696318834.4159658-CDS-E-siliculosus-1a_F_contig1672:10265..108511696318834.4159658-CDS-E-siliculosus-1a_F_contig1672:10265..10851Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 10266..10851 +
1622928171.257615-CDS-E-siliculosus-1a_F_contig1672:11410..115651622928171.257615-CDS-E-siliculosus-1a_F_contig1672:11410..11565Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 11411..11565 +
1696318834.4370582-CDS-E-siliculosus-1a_F_contig1672:11410..115651696318834.4370582-CDS-E-siliculosus-1a_F_contig1672:11410..11565Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 11411..11565 +
1622928171.2729666-CDS-E-siliculosus-1a_F_contig1672:12568..126641622928171.2729666-CDS-E-siliculosus-1a_F_contig1672:12568..12664Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 12569..12664 +
1696318834.4470105-CDS-E-siliculosus-1a_F_contig1672:12568..126641696318834.4470105-CDS-E-siliculosus-1a_F_contig1672:12568..12664Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 12569..12664 +
1622928171.2908542-CDS-E-siliculosus-1a_F_contig1672:13190..133321622928171.2908542-CDS-E-siliculosus-1a_F_contig1672:13190..13332Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 13191..13332 +
1696318834.4550664-CDS-E-siliculosus-1a_F_contig1672:13190..133321696318834.4550664-CDS-E-siliculosus-1a_F_contig1672:13190..13332Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 13191..13332 +
1622928171.310371-CDS-E-siliculosus-1a_F_contig1672:13579..137791622928171.310371-CDS-E-siliculosus-1a_F_contig1672:13579..13779Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 13580..13779 +
1696318834.4624386-CDS-E-siliculosus-1a_F_contig1672:13579..137791696318834.4624386-CDS-E-siliculosus-1a_F_contig1672:13579..13779Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 13580..13779 +
1622928171.3232272-CDS-E-siliculosus-1a_F_contig1672:14166..145231622928171.3232272-CDS-E-siliculosus-1a_F_contig1672:14166..14523Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 14167..14523 +
1696318834.4698596-CDS-E-siliculosus-1a_F_contig1672:14166..145231696318834.4698596-CDS-E-siliculosus-1a_F_contig1672:14166..14523Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 14167..14523 +
1622928171.3361213-CDS-E-siliculosus-1a_F_contig1672:15232..153011622928171.3361213-CDS-E-siliculosus-1a_F_contig1672:15232..15301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 15233..15301 +
1696318834.479643-CDS-E-siliculosus-1a_F_contig1672:15232..153011696318834.479643-CDS-E-siliculosus-1a_F_contig1672:15232..15301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 15233..15301 +
1622928171.3523579-CDS-E-siliculosus-1a_F_contig1672:16083..162211622928171.3523579-CDS-E-siliculosus-1a_F_contig1672:16083..16221Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 16084..16221 +
1696318834.4870455-CDS-E-siliculosus-1a_F_contig1672:16083..162211696318834.4870455-CDS-E-siliculosus-1a_F_contig1672:16083..16221Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 16084..16221 +
1622928171.364571-CDS-E-siliculosus-1a_F_contig1672:16909..171011622928171.364571-CDS-E-siliculosus-1a_F_contig1672:16909..17101Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 16910..17101 +
1696318834.4941638-CDS-E-siliculosus-1a_F_contig1672:16909..171011696318834.4941638-CDS-E-siliculosus-1a_F_contig1672:16909..17101Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 16910..17101 +
1622928171.3806133-CDS-E-siliculosus-1a_F_contig1672:17882..179601622928171.3806133-CDS-E-siliculosus-1a_F_contig1672:17882..17960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 17883..17960 +
1696318834.5014858-CDS-E-siliculosus-1a_F_contig1672:17882..179601696318834.5014858-CDS-E-siliculosus-1a_F_contig1672:17882..17960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 17883..17960 +
1622928171.3971884-CDS-E-siliculosus-1a_F_contig1672:18618..187351622928171.3971884-CDS-E-siliculosus-1a_F_contig1672:18618..18735Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 18619..18735 +
1696318834.5091245-CDS-E-siliculosus-1a_F_contig1672:18618..187351696318834.5091245-CDS-E-siliculosus-1a_F_contig1672:18618..18735Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 18619..18735 +
1622928171.4167926-CDS-E-siliculosus-1a_F_contig1672:19514..195921622928171.4167926-CDS-E-siliculosus-1a_F_contig1672:19514..19592Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 19515..19592 +
1696318834.5169063-CDS-E-siliculosus-1a_F_contig1672:19514..195921696318834.5169063-CDS-E-siliculosus-1a_F_contig1672:19514..19592Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 19515..19592 +
1622928171.431067-CDS-E-siliculosus-1a_F_contig1672:19646..204141622928171.431067-CDS-E-siliculosus-1a_F_contig1672:19646..20414Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 19647..20414 +
1696318834.5318282-CDS-E-siliculosus-1a_F_contig1672:19646..204141696318834.5318282-CDS-E-siliculosus-1a_F_contig1672:19646..20414Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1672 19647..20414 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928171.4465768-UTR-E-siliculosus-1a_F_contig1672:20414..209641622928171.4465768-UTR-E-siliculosus-1a_F_contig1672:20414..20964Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1672 20415..20964 +
1696318834.5434105-UTR-E-siliculosus-1a_F_contig1672:20414..209641696318834.5434105-UTR-E-siliculosus-1a_F_contig1672:20414..20964Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1672 20415..20964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1672.3771.1

>prot_E-siliculosus-1a_F_contig1672.3771.1 ID=prot_E-siliculosus-1a_F_contig1672.3771.1|Name=mRNA_E-siliculosus-1a_F_contig1672.3771.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=992bp
MDVGGDAHAQEEVEDDPIPNELDNALVHLLPAIKACGSDPSLPTYLDLAK
FEELAGPVLREGAVSEGGTGGGTGDDGGGRRRLDERVSGEIQVAFRHCMH
EAGLALAGLDVGGGRGGKGGRKAAAEGPGSAAALSGSEPMAEPMGILSLA
LAFVANEAGLDKSDGDGSRSINQVLTALPLLLLEDFMESQARRRSTCKEF
WSAWVEPNSERLSRLVPVNNGRYPLIRLCNKLAQRMSKTHDSSLCGQMHM
FLGKALDFFERSAVNVSGSINLDNVTRFEDEEQFRRAMMGFDGEDEASSG
TGAAVAAAPAAKGGGGAMEVEVDAPAGAAAAAAAAGGGATKEKKGANPQE
FVVDYPLYRSFWRLQKYPLQQDKVVKGEEAKGTWEALLADVDKILGAFEA
NAFSEHDLRLAREKWAADGGGGGGLSSPSSSAAAAAAAKGSAAAAAAAAT
TPGKRKRGGGRAAGAGVAPAPAAREVAEGESEKGGAVYFGLKYLTSSRLL
RLQLRDPTLRLQVLTQWLILAASLKNKVANAKDSPNSVEDLKPRIELAKR
LVKATPPRGEEYLSMLQIVLNRESFWTQWKDVNKCKLAITAAKEEETQRE
KDKAAGVVARAPSYPNKRPRPSASVAAGERAKYSPLGAGFPLEKMVSKLR
AGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGGENPANL
VGCYDGDLVKAMERLDKAQADAEAAAKAAEEAAAAKAAEEAAAAKAAEEA
AAAKAAEEAAAAAAPTQPTKDEPTVDPPAAAEAAPAAEPVGGDSTAMAVD
GEEEGRNVEVKKEAAAASTSGEAAVPAVAVSADASGAADAAAKAASASTA
ADTTPAGDRADDNGLATDGAVVAGAVVTSAAATDATASKASATPADAPTD
PDGNGLAVTEGAAATAAVEGSSDSVVSPPQEETPDGGGGSEKTNAVADST
APATDAGKEAVAEEAPAAVTAAAAEKPAPSPARVTRRSSKK*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1672:10266..20964+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1672.3771.1 ID=mRNA_E-siliculosus-1a_F_contig1672.3771.1|Name=mRNA_E-siliculosus-1a_F_contig1672.3771.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10699bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1672:10266..20964+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGTCGGCGGCGATGCCCACGCCCAAGAGGAGGTCGAAGACGACCC GATCCCGAACGAGCTCGACAACGCGCTGGTGCACCTCCTCCCGGCCATCA AGGCCTGCGGCAGCGACCCGAGCCTGCCGACCTACCTCGACTTGGCCAAG TTCGAGGAGCTCGCGGGACCCGTCCTGCGAGAGGGCGCCGTCAGCGAAGG CGGCACCGGCGGCGGCACCGGCGATGACGGTGGTGGCAGGCGGCGCCTTG ACGAGAGGGTTTCGGGGGAGATCCAGGTGGCGTTCCGGCACTGCATGCAC GAGGCGGGGTTGGCGCTGGCGGGTCTGGATGTCGGCGGCGGGCGTGGTGG GAAAGGAGGAAGAAAGGCGGCGGCGGAGGGACCGGGGAGTGCGGCGGCGT TGTCGGGATCGGAGCCGATGGCGGAGCCTATGGGAATCCTGTCCCTCGCC CTGGCGTTCGTGGCTAACGAGGCCGGCCTCGACAAGAGCGACGGTGACGG CAGCAGGAGCATCAATCAAGTTCTCACCGCGCTGCCGCTGCTGCTGCTCG AAGACTTCATGGAGTCGCAGGCAAGAAGACGCAGCAGTAGTGGGTTGAGT GGGGAGCGGCTCCTGTTTTGGTTTCCCGTCAGTGTGTTGTAAGAAACCCT TTGGCCTGTAAACTCTGGGAGTCATGTAGTGGAGCAGGGAAGAGTGGGTG TCGAGTGCTATTTACGTTTGCTAAGATGCATCTACTCTATCCCGTTGTGC ATTCGCTTCCCCTCTTGTTTGTGGTCTTCAAATCATGTTGTGCGGCGGCG AGTTAATCAACGCTGCGACGAAACCTCTTTCAGGGCACGTAATAAGAGCT TGGGTCGGATCGGAAATCACTCGAACTGGATTTCATGAGCCCAGCAGAAC AGGAAATACTTGAAGCAGTGCGTCATATTCCCAGAAGCCGGCGGATGCTG CGTGGGCATGTGGTCGCGCGAGGGGGTAATACCCCGAACGGGCGTGGAGA GCTTTATGATGCGTCGTTGTCTAGTAGTTCGTGTGCGTTCGTTTTTTTTT GTTCTTCGCACAAATAACGCCTGCCTTCGTGTTGGCACTTGTCAATTCAT GCGTCCCCGCGCTCCGCTGCTTTGCTCTTCTTCAGGGAAGAACAGCGTGC AAGGAGTTCTGGTCGGCGTGGGTGGAGCCGAACTCGGAGAGGCTGTCGAG GCTTGTCCCCGTGAATAACGGGAGGTATCCCCTCATCCGGCTCTGCAATA AGCTGGCGCAGAGGATGAGCAAGACGCACGACTCGTCCCTGTGCGGGCAG GTGGGGGTGTTCCTGTTGTTTTTCGTGTGTTCTTCCGAGTGTTTTTGTTG GCCCGTGACCGTCGGGGGATATGCTCGTCCCTCCACTGCGAAATACCGGG TGTTCTAGTGGAGGGTTTGCATAGAGGCTGTGTTTTTTGTTTGTGCTGTT GTATCATTGCTCTCGGCCTCAAACCATTTAATATACCGGTGGTATTGGGA TTGGATTTGGATGAGGCCTCCAGTACTATGGACGAAGGTCCCAGATGAAC TGCGGCGTCGAGTATGCGGTCGGCTGGAGAACTGATTTGTCAACAAGCCT CAAATCAACGTCGACACTACGTAGGGTGGGTGGAGCGGTCTCGACAAATA TTTGTTTTTCACATTTTGCACGGTAGGGAAAGTAACAGACCATGAATCAG CTGTATGCAACTTTCAACCTGCTATCGGGGGGCAGACGCCTGTATCCGTT TCCGTGCCGACGTAGGATTCGTTTGTGGTGGGGCCGATTTTGCGGGGATT GTTGGCCTGTGGCCGTGGGGTGTGTGTACGTGCGTCTATATCTTCACGAG CAGTCGTACGCAGAACGTCGTGGATGTTGTCTTTCACAAGAAACCGGACC TTCACTCGATGCCCTCACAAATTGCCACTATTTTCCCTCTCTCTCGTTCT TTGCACCGGTTACCAAGCTTGTCAGTTCTCATGTTTTTTGTGGCAGTGAT TCCTGCTTACTCTCCCCCCCCTCCCCCCTTCCCCGCTCACCGACGGGTAT TATTGGCGGTCCCCCCTGAGAGGTGGTATTAGACAGGAGAGGGAAAACAT CTTTGAGCCACCTTTGGCAAAGTAGGAAGGGACGTTTGGCAAACGGTGAT CGGTCTTATGGGAACAATGCTCCGTCCTCCCTTGAGACGCGTGATCGGTG GTCTATCAACTACGGCATGCAAAACATTAGTACGCCTCCCCCCCGTCCCC CCCACTCTCTCTGCGTTCCTGACGTCGTGGCAATCGCACGCCTGGCGGCA CAGATGCACATGTTCCTAGGCAAGGCGCTGGACTTCTTCGAGCGGAGCGC CGTCAACGTCTCGGGCAGCATCAACCTCGATAACGTCACCAGGTTCGAGG TGCGGATGTTGTGCACTTAGAAGGACACGCGTTCCCCGAAGCGCATCGTT GCATGCTACAGCAAAACCTTTACTTCAAGGGAATCTATTGTAGACGCAGT GAGGTCGCGTTGGGTCTTCGGAGTCGGGCTGCTGCTGGGCCGGGGGCAAG CAAGCCCTGTATCTCCTATCTTATTTAATGTCTCCGCCCTCCCTAGATTG TTGGGCGGCGTGTTTTCTCCAGCCGTCTGCTGATTTTTAGCATGCACACC TGGAGTGATGTCCTTGGGGAGTGTAAAAACATTTCCGTCGGTACGATCTG CTGAGGCTTCTGTTTCCTCTCTGTTTTCTGTTTCGTATGTCTCGTCCCCT GTCTCCGTCTTTTTTTGTTCAACCAAGCCGCGGGGCGCATGTATCGTTCC TACATGTCAATACTGCTCCCCCCCCTCCTTATACTTCTCTCTCTTTTACA ACGTTGTTCAAAGCCCCCCCCCCCCCCCTCTCTTTCTCTCCCCCCTACCC CCCTCCTTTCTGCCTCGTACACAAGGACGAGGAGCAGTTCCGGCGTGCGA TGATGGGGTTCGACGGAGAAGATGAGGCGTCATCGGGGACCGGGGCGGCG GTGGCCGCGGCGCCCGCAGCCAAAGGCGGCGGTGGCGCGATGGAGGTCGA GGTCGATGCTCCAGCAGGTGTGTGTCTACGGCATTTTGTCAAAAGGAGGG AGGCTTCCGGCGAAACGACATCCCTTACATGAGGTGTTTCACAAGAACCC ATGTGAGCCCCACCCACGGGCGGGCCGGCCGGCCCGTTGCGTCGCTTTCT GGCGTGTGGGAATCCTGGTGTGTTGTGGTTGTTGTGTGCGACCGCTTTGT GTGCCCCACCTTCTCTCGCCCCTGCTGCTGCTGCTGCTGCCGTTGCTGCT GTTGTTGGTCGCAGGTGCTGCTGCTGCTGCCGCCGCCGCGGGAGGCGGCG CGACCAAGGAGAAAAAAGGTGCCAACCCACAAGAGTTTGTGGTGGACTAC CCGCTGTACCGGTCCTTCTGGAGGCTGCAGAAGTACCCGCTGCAGCAGGA CAAGGTGGTGAAGGGGGAGGAGGCCAAGGGGACGTGGGAGGCTCTCCTTG CGGACGTGGATAAGGTACGGTACGGTACGGTACGGTAGGCGTGGTGTGAT TGATGGCATGGATTGGCGGTACTCGGGCATGTGGTGTGTGAGAGGTCAGA TGGTGTAGAGGTGAAGATTTATGTTGGGGACATAATGCGACAAGCATGAT GATGCGTCGAGGCTGCAGGTGCAAACGCTGTCCGCATGCAACTTGGTGTT TTATCTACCTTTGGCAAGAGAAGCGCAAAGAGATAGAGAGAAGAACACGC CAACCCTACCATCAGCAAGGTGCGCTTGAACACCGACTCTCCTTTGGCCC CAAACCGTCCGGCGTGTCCTCTTCCCTTCCCTTGACGGTTTTTAAACCTG GGCGTCCCGCGAACAATACAACGCAACATCAACAACAACGGTACAAAAAA GATTCTGGGTGCCTTCGAGGCGAACGCGTTCTCGGAGCACGACCTGCGCC TCGCTCGCGAGAAGTGGGCCGCTGACGGCGGCGGCGGCGGCGGTTTGTCG TCTCCGTCGTCATCCGCCGCGGCGGCGGCAGCGGCAAAGGGGTCAGCAGC AGCGGCGGCGGCGGCGGCTACTACGCCCGGCAAAAGAAAACGGGGAGGGG GCAGGGCGGCGGGGGCGGGAGTGGCGCCGGCGCCGGCAGCGAGGGAGGTG GCGGAGGGCGAGAGCGAGAAGGGGGGGGCCGTGTACTTCGGGCTAAAGTA CCTGACGAGCTCGCGCTTGTTGAGGCTGCAGCTACGGGACCCCACGCTGA GGCTGCAGGTGTGCTTCCGCGCGCGCGCGCGCGTGTTTATTACTGGCATG GACCGCGCTAAACGTCTGACAACCAACGGGAAGACGTCGGTGTCAGTGCG ATTGAAAACAAAAAATGCTTGTAAATGCCATGATTTGGGACCAACCCCGT GAGGGGGCAATGAGGGAGGCCGTGTGTGCGCGCGTGTGTTCTTGTCTTTT AGTAGTGACGACGGACACATTCACGGACGATGTCCTTGTTGTGTCAACTG ACCCACACACCTTTCAGAACGAGAACCTTGAATCCCTATAGGGTGTTTCT GTCAAGTTATGACCCCCCCCCCCCCCCCCCCCCCCCTCCTTCCGGCGGCC AGGGCGCGCGTGTGGACCGGGCGGCCGAGCCGGCAAGATTTTGCCCAGCC TCGCGCCAGAGTNNNNNNNNNNCCGAACGCAACCCCTGTCTCCCCATAGG GTGTTTTTTTCAAGTTATGCCCCCCCCCCCCCCCCCCCTCTTTTTGAAAA GGCGGGAAGGGATATCGTTAGGATAGACAGACTAGGGAAGACATTTTTGA GCCACCTTTGGCAAAGTAGGAAGAAACGATTGGCCATCGGTGATCGGTCG TGTGGGAACAACGCTCCGTCCTCTCGAGGACGCGTGGTCAACGGTCTAAC CGCTAAGGCATGCAAAACATAAGACTACGCCCCCCCCCCCCTCTCTCCGC TGCCGCCACCCATCCAGGTGCTGACGCAGTGGCTGATTCTCGCCGCATCT CTCAAGAACAAGGTGGCAAACGCGAAAGACTCCCCGGTGAGAGATACTCC CCAATGTTTATTCTTGCTACTGTCGTTTTTTGATGTTTAGTTCTGTTGAG TTCCATAGTCATTGCTGGGGGTTGTGGCTTCCTGTTGTCTGGTTTCGAAC GTACTGCTTGTTTCGTATGGTATTTTTTCTTATTTCTGTTCGTTCGCACA TGGAGAGGGTAACCTCTCTTCCTTTGTGAATTACTGCTTGTTGATTTAGG ACGACTTGTCCAAATCTCTTATTCTGGAGGACGACTCGGTTGGAGGTTGA ATCGATAGGGCTGCGGCGAAACATGTTATTTAAAGTGCCACGCTGATATA TTGCGTCCCAAAACTGACAATATCCAAAATACCCAAAACAAACACACCCC AACACTATGTAAATTGATAGACTACTTCCCTCACAGCAAATATTATATTA CACCCGATCGGTGCTAGTATTATGTTGTACTTTGTATGCTACACATTCCG TACTGGTATGTTGCAACGCCGTTCAAACGTTTAAACATGTACAATCCTCT CAACCCGGCTTCATACTGACTCTTTCCAACGCTTGCAGTGTATGTATGGA GTGTGAGTAGCGCAGCAGTGTGGTATTGCGTCCCAAACTGACAATACCCA AAACAAGACAGACCCAACCACGTACTCTACTTCCTCACGACCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGCGCCCCCCCACCCCCCCC CACCCCCCCCCCGCCGGGGCGACGGCGCCCCCCCCCCCCCCGCCGGGGCG GCGCGTCGCCCCGCCCAGAATTCGGTGGAGGACCTCAAACCTCGCATCGA GCTCGCGAAGAGACTGGTCAAGGCGACGCCGCCCCGTGGCGAGGAGTACC TTAGCATGCTGCAGATCGTCCTCAACCGGGAGTCTTTCTGGACGCAGTGG AAGGACGTGAGTTGTTTTGCCCTTCGGCGTTTTTTTTTTTTGTAGTCTGT TTTTTGTGTGGGATGATGGAACGCATGCAGAACAACCGAACAGAAGGCTC ATTTTTTTTTGTTGCGTGGGATGATGGAACGCATGCACAACAACGGAAGA CTTTGTCACATGTACTGTTGCGACATGTTTACATGTGGCTTAACATCGGA AAATCGCCAGCCTCGAAAACGTAGATCGAGAGCAGAAACAACAAGCAACA AGTACCGGTGCGTACCCGTCGTCGCGCGTCTAATAACAGAGAGTAAGACA AGCATGATACTACGTGCAATTGGATGACCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCGCCCCGCCCACCCGCACCCACACCGCGACACC ACAACGACAACACCCCAACCCCCCCCCCCCCCCCCACNNNNNNNNNNGCG TACCGGTCGTGGGGGGTCTAAAAACAGAGAGTAAGAAAAGCAAGTTACTA CGTGAAATTGGGGGACCCCCCCCCCCCCCCCCTTCCAACTGCCGAGGACG CGTGGTCAATGGTCTACAGTAACGACCAAGGCATGCAAGACACTAGAGTA CACCCCCCTCCTCCGCCCCGCCATGGAAACAACAACGGACAAGAGCAAAT TTACTTGAGTCTTCCAATAATAAAAAAACACTCCCCGGGAGCAGGTGAAC AAGTGCAAACTTGCGATTACCGCGGCGAAGGAGGAAGAGACGCAGAGGGA GAAGGACAAGGCGGCCGGGGTCGTCGCGCGCGCCCCGTCGTACCCCAACA AGCGGCCGCGGCCCTCGGCCTCCGTGGCGGCGGGGGAGAGAGCCAAGTAC TCGCCGCTCGGGGCCGGCTTCCCGCTGGAGAAGATGGTGGGTAACAAAGC TAAGCCTTGTTGGCGTGCTCGCGTGCGCGCTTGTGCGCGTTTTTTGGTGG TTCTCTCTTTCGAGAAACCGTGTACGTTTGATTTTTGTTCGTTGTGATAA GCGGCGAACCGACTGGAGAAGATGGTGCGGGACCCTTGTTGGCGTGCACG TGTGTGCGTGTGTTTGGTGGGCTCTCGTCAAAAACCGTACGGGAATTTTT TTTTCGTTGTTACAGCGGCGAGCCGGTAGAGCCGAGAGAAAAAGTGCCGC CACGAGATTGGTGCGTTGGTGTTTCCCTGCTGCAGCGTTTTTTCTCCCCC CCCCCCACTTTGGTTCCCCTCGTGGGTATGGAGCTTTCCTTTCAGGTGTC CATTGCTCCACGACCAACAAAACCCGAACGGCAGGTGCAAGGAAAGCTCT CGACTAGATCTAAATCGCTCTTTTTCGGGACAGGCAGCCAGCCTATCGGT TGTGGAGCACAACCAAGCTTTGACAAAATCGATCGCACACCTGTGTGCGC TCCCTCTTGTTCTTTTGTGCTATCGGACCCTGAACAAGCAAGCAAGCGAC CGGCTGCGCCCTCCCCTCTCGGCCCCCTTCTCCTCCAACACCTTCCATTT TTTTAAGAAGATATGCATACAATCACAGAGAGACTTGAGTACCCGTTCGA GATAATACCACAGTCGGCAGGAATGATATGTCGAACGAAGCACTTTGCAG TGCTTGTGGGAGTTACGTTTTGCTGACGCGCACCCGCGGCGTGCTGCGTG CGCCTTTATTTGTGCAGGTGAGCAAGCTGCGGGCAGGCGTCCCGACGTCT CAGGAGCACCTCGAGGACCAGCGGATGTGTGCGGAGGACCCCGATGTGAG CGTTCTTCTGTTCGCTGTTGCCATTGCCGTACCTAGCTGCTGCTGCTGCT GCTGCCGCTGCCTAAAGCGCAACAGGTTTATAGTGTGCGGGTATGGTGGA CACTGCTGGCTGGTTTGGTGTAGGCCGTTTGGCTCACGCGTTTTTTTCCT GCCGTCGATTTTCCATCTCTGTGTGTGCCATCTTGTTGGTGTCGACTCCT GGGTCGTCACAAGGAAGGCGGCGGGTAGACGCGCGTCTATATTCTCCTGC CGGCGCAAGCGCCCGCACCACCTAACTAAGTCCTTGCGAGGAAGATCCTG CGCGCAATCTACCGGTCTCCCGACTTGTGTCGTCTTCTCTCATCACTCGC GCCTGGAAGTTTACTTTGCCTGCTGTTTTCCTTCCTCTGGCCTTTTGTTC AGTATTGCCCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCGCCCGCGCCCCCCCTTCCGCCCCCCNNNNNNNNNNCCCCCGCGCC TGGATTTTTTCTTTTCCTTCTTTTTTCCTCCCCCTGTCCTTTTTTTTATT TCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGTTGATGTTGGAGTGGTCC TTACCTGTGCCGCTCGTTCTCCTTTCGCTGACGGGGCCCCCGTTTGTGTT CAGACCCCCGCCTCGGAGCTGCCGAGCGCAAGCCCCCTCTACACCTGGCG GGCGCTACGCCTGCTCGGCGGGGAGAACCCGGCGAACCTCGTGGGGTGCT ACGACGGAGACCTTGTCAAGGTCTGTCGCGAAGGAATGCTGCTGGTGCTG TGGCACACGGCGTGATGGTGTAGCCGTGGAGGGGTATGATGCGATTTTGA TCCACGGTATTCCAATGGCGCCGGTCACGGCAACGTGGGAAACGGTGCCG TTAGAACGCGTCGCGTGGGACGGTTTGGTAATAGAACCGGTTGTCCAGGT GGTAAGTGACCCTCCCTGTACGGTCCGTCGCGGGGTGTTACGATGAAGGC TTCGCCAACATTTGGCGCGTCACAGCAGTGCTGGCCTGCCCGTCCGGCAT GGTTCGTCAAGTGAAGCACATTGTTAGCCCCCCGCTGCTGAGAACCGTCA ACTCGGAGTCTTTGCCAAGGATATACCAGTTACATTCACATGGCGTGAAA GGACTCTAATACCCACGAGCGAGCGTGGGAGAGGCTGTGAGGTGTTCGTC ACGTTCACAACCTTTTTTTACCTCCCCAACATGCTGTCGTGCGGTTCCAA AGAAGTTCATTTTCCTCACGTTTCGCCATCCACTGCTGTTGTGTTGTGGG AAACGGGTTCGAGCTATTTGCGATCCCGATATTGTACGAGTTAGGATTGC AAGATTTTTATTTTCCTCTCCCGTTGTCGAGCTGGACGGGTTCACGGCGG TGCTGCTTCTCAAGCCTCCGAACTCCACCCTTGGGTCTCGGTGCTGGAAA CGAATGGCCGCCTTCGATTCGGCCCAACCCGTATTTGCTTCTTGCGTGTT TCTCAAACGCTTCCATGCTACTGCTGTCGCTTGCGTTGTGTGTGCCCAGG CCATGGAAAGACTCGACAAGGCTCAAGCCGATGCCGAGGCGGCGGCGAAG GCGGCGGAAGAAGCGGCGGCGGCGAAGGTGGCGGAAGAAGCGGCGGCGGC GAAGGCGGCGGAAGAAGCGGCGGCGGCCAAGGCAGCGGAAGAAGCGGCGG CGGCGAAGGCGGCGGAAGAAGCGGCGGCGGCCAAGGCAGCGGAAGAAGCG GCGGCGGCGGCGGCGCCCACACAACCGACTAAGGACGAACCTACCGTAGA CCCTCCTGCGGCAGCAGAGGCAGCACCTGCGGCCGAACCGGTGGGAGGAG ATTCAACGGCAATGGCTGTAGACGGAGAAGAGGAGGGCCGGAACGTGGAG GTAAAAAAAGAAGCGGCGGCGGCGTCAACAAGTGGCGAGGCGGCCGTTCC CGCTGTCGCTGTGTCCGCCGACGCATCCGGTGCTGCTGACGCTGCCGCCA AGGCTGCCAGTGCGAGTACTGCTGCCGACACCACTCCCGCTGGTGATAGG GCTGACGACAACGGTCTGGCCACTGACGGGGCCGTGGTTGCTGGTGCCGT CGTGACTTCTGCAGCCGCCACCGATGCCACTGCCTCCAAAGCTTCCGCTA CGCCTGCTGATGCCCCCACGGACCCTGATGGCAACGGTTTAGCAGTCACG GAAGGCGCGGCGGCAACGGCCGCCGTTGAGGGAAGTAGCGACAGCGTCGT TAGCCCACCGCAAGAAGAAACACCCGACGGCGGCGGCGGCAGCGAGAAGA CGAACGCCGTCGCGGATTCAACGGCGCCTGCTACGGACGCAGGGAAGGAA GCGGTGGCGGAGGAAGCCCCAGCGGCGGTGACGGCAGCGGCGGCGGAAAA ACCTGCGCCTTCACCTGCCAGAGTGACTAGGAGGAGCTCGAAAAAGTAGA AAGAGCCGCAGCGAGGGCGTGGTGCATAGGGGGCGTGGTGCATGGGGGAT TTGAGTCGGAGACTTGTGCTGCTGCTGCTGGCGGTTAATAGAAGTGCTGT GTTTGCTACTCCACGGCGGCAGAGTCGGCTCCGATGCAGGCGGAAAGGCG CGCCGTTGTACTCTGTGTTGGCCGAAGGGCGTGTTCAGGACGTTTGGGGG CAGCGTGCGCTCGGTCTCATGTGCTCGGTGTTCGTTAGCGGCACGCCAGA AGGAATTCGTGTGGAAGATATCGACCCGAGCGTGAGATATTCTTCGTGGC ACGATATACTTACGACGCAGTCTTGAGAGTGTAGTCAACGGCGGCGCTTA TTTGCGCCGGAAATCGTTTTGGCCTGGCTTCTTCGATCCTCGTCACGACG ACCGCTTGCGGGGGAAACTACTTGAATGAGAACGAGTTGCACGTTCGAAG CATGGGGATTAATTTATGGCAATGGCAAGTTGCCATGTAGGAGACGTGAT CTCGCGAGGAAGAGGGTCTACCCAACAAATGGCCGACGGGGCACGCAAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1672:10266..20964+

>mRNA_E-siliculosus-1a_F_contig1672.3771.1 ID=mRNA_E-siliculosus-1a_F_contig1672.3771.1|Name=mRNA_E-siliculosus-1a_F_contig1672.3771.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5952bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1672:10266..20964+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGTCGGCGGCGATGCCCACGCCCAAGAGGAGGTCGAAGACGACCC
GATCCCGAACGAGCTCGACAACGCGCTGGTGCACCTCCTCCCGGCCATCA
AGGCCTGCGGCAGCGACCCGAGCCTGCCGACCTACCTCGACTTGGCCAAG
TTCGAGGAGCTCGCGGGACCCGTCCTGCGAGAGGGCGCCGTCAGCGAAGG
CGGCACCGGCGGCGGCACCGGCGATGACGGTGGTGGCAGGCGGCGCCTTG
ACGAGAGGGTTTCGGGGGAGATCCAGGTGGCGTTCCGGCACTGCATGCAC
GAGGCGGGGTTGGCGCTGGCGGGTCTGGATGTCGGCGGCGGGCGTGGTGG
GAAAGGAGGAAGAAAGGCGGCGGCGGAGGGACCGGGGAGTGCGGCGGCGT
TGTCGGGATCGGAGCCGATGGCGGAGCCTATGGGAATCCTGTCCCTCGCC
CTGGCGTTCGTGGCTAACGAGGCCGGCCTCGACAAGAGCGACGGTGACGG
CAGCAGGAGCATCAATCAAGTTCTCACCGCGCTGCCGCTGCTGCTGCTCG
AAGACTTCATGGAGTCGCAGGCAAGAAGACGCAGCAATGGACGTCGGCGG
CGATGCCCACGCCCAAGAGGAGGTCGAAGACGACCCGATCCCGAACGAGC
TCGACAACGCGCTGGTGCACCTCCTCCCGGCCATCAAGGCCTGCGGCAGC
GACCCGAGCCTGCCGACCTACCTCGACTTGGCCAAGTTCGAGGAGCTCGC
GGGACCCGTCCTGCGAGAGGGCGCCGTCAGCGAAGGCGGCACCGGCGGCG
GCACCGGCGATGACGGTGGTGGCAGGCGGCGCCTTGACGAGAGGGTTTCG
GGGGAGATCCAGGTGGCGTTCCGGCACTGCATGCACGAGGCGGGGTTGGC
GCTGGCGGGTCTGGATGTCGGCGGCGGGCGTGGTGGGAAAGGAGGAAGAA
AGGCGGCGGCGGAGGGACCGGGGAGTGCGGCGGCGTTGTCGGGATCGGAG
CCGATGGCGGAGCCTATGGGAATCCTGTCCCTCGCCCTGGCGTTCGTGGC
TAACGAGGCCGGCCTCGACAAGAGCGACGGTGACGGCAGCAGGAGCATCA
ATCAAGTTCTCACCGCGCTGCCGCTGCTGCTGCTCGAAGACTTCATGGAG
TCGCAGGCAAGAAGACGCAGCACGTGCAAGGAGTTCTGGTCGGCGTGGGT
GGAGCCGAACTCGGAGAGGCTGTCGAGGCTTGTCCCCGTGAATAACGGGA
GGTATCCCCTCATCCGGCTCTGCAATAAGCTGGCGCAGAGGATGAGCAAG
ACGCACGACTCGTCCCTGTGCGGGCAGCGTGCAAGGAGTTCTGGTCGGCG
TGGGTGGAGCCGAACTCGGAGAGGCTGTCGAGGCTTGTCCCCGTGAATAA
CGGGAGGTATCCCCTCATCCGGCTCTGCAATAAGCTGGCGCAGAGGATGA
GCAAGACGCACGACTCGTCCCTGTGCGGGCAGATGCACATGTTCCTAGGC
AAGGCGCTGGACTTCTTCGAGCGGAGCGCCGTCAACGTCTCGGGCAGCAT
CAACCTCGATAACGTCACCAGGTTCGAGATGCACATGTTCCTAGGCAAGG
CGCTGGACTTCTTCGAGCGGAGCGCCGTCAACGTCTCGGGCAGCATCAAC
CTCGATAACGTCACCAGGTTCGAGGACGAGGAGCAGTTCCGGCGTGCGAT
GATGGGGTTCGACGGAGAAGATGAGGCGTCATCGGGGACCGGGGCGGCGG
TGGCCGCGGCGCCCGCAGCCAAAGGCGGCGGTGGCGCGATGGAGGTCGAG
GTCGATGCTCCAGCAGGACGAGGAGCAGTTCCGGCGTGCGATGATGGGGT
TCGACGGAGAAGATGAGGCGTCATCGGGGACCGGGGCGGCGGTGGCCGCG
GCGCCCGCAGCCAAAGGCGGCGGTGGCGCGATGGAGGTCGAGGTCGATGC
TCCAGCAGGTGCTGCTGCTGCTGCCGCCGCCGCGGGAGGCGGCGCGACCA
AGGAGAAAAAAGGTGCCAACCCACAAGAGTTTGTGGTGGACTACCCGCTG
TACCGGTCCTTCTGGAGGCTGCAGAAGTACCCGCTGCAGCAGGACAAGGT
GGTGAAGGGGGAGGAGGCCAAGGGGACGTGGGAGGCTCTCCTTGCGGACG
TGGATAAGGTGCTGCTGCTGCTGCCGCCGCCGCGGGAGGCGGCGCGACCA
AGGAGAAAAAAGGTGCCAACCCACAAGAGTTTGTGGTGGACTACCCGCTG
TACCGGTCCTTCTGGAGGCTGCAGAAGTACCCGCTGCAGCAGGACAAGGT
GGTGAAGGGGGAGGAGGCCAAGGGGACGTGGGAGGCTCTCCTTGCGGACG
TGGATAAGATTCTGGGTGCCTTCGAGGCGAACGCGTTCTCGGAGCACGAC
CTGCGCCTCGCTCGCGAGAAGTGGGCCGCTGACGGCGGCGGCGGCGGCGG
TTTGTCGTCTCCGTCGTCATCCGCCGCGGCGGCGGCAGCGGCAAAGGGGT
CAGCAGCAGCGGCGGCGGCGGCGGCTACTACGCCCGGCAAAAGAAAACGG
GGAGGGGGCAGGGCGGCGGGGGCGGGAGTGGCGCCGGCGCCGGCAGCGAG
GGAGGTGGCGGAGGGCGAGAGCGAGAAGGGGGGGGCCGTGTACTTCGGGC
TAAAGTACCTGACGAGCTCGCGCTTGTTGAGGCTGCAGCTACGGGACCCC
ACGCTGAGGCTGCAGATTCTGGGTGCCTTCGAGGCGAACGCGTTCTCGGA
GCACGACCTGCGCCTCGCTCGCGAGAAGTGGGCCGCTGACGGCGGCGGCG
GCGGCGGTTTGTCGTCTCCGTCGTCATCCGCCGCGGCGGCGGCAGCGGCA
AAGGGGTCAGCAGCAGCGGCGGCGGCGGCGGCTACTACGCCCGGCAAAAG
AAAACGGGGAGGGGGCAGGGCGGCGGGGGCGGGAGTGGCGCCGGCGCCGG
CAGCGAGGGAGGTGGCGGAGGGCGAGAGCGAGAAGGGGGGGGCCGTGTAC
TTCGGGCTAAAGTACCTGACGAGCTCGCGCTTGTTGAGGCTGCAGCTACG
GGACCCCACGCTGAGGCTGCAGGTGCTGACGCAGTGGCTGATTCTCGCCG
CATCTCTCAAGAACAAGGTGGCAAACGCGAAAGACTCCCCGGTGCTGACG
CAGTGGCTGATTCTCGCCGCATCTCTCAAGAACAAGGTGGCAAACGCGAA
AGACTCCCCGAATTCGGTGGAGGACCTCAAACCTCGCATCGAGCTCGCGA
AGAGACTGGTCAAGGCGACGCCGCCCCGTGGCGAGGAGTACCTTAGCATG
CTGCAGATCGTCCTCAACCGGGAGTCTTTCTGGACGCAGTGGAAGGACAA
TTCGGTGGAGGACCTCAAACCTCGCATCGAGCTCGCGAAGAGACTGGTCA
AGGCGACGCCGCCCCGTGGCGAGGAGTACCTTAGCATGCTGCAGATCGTC
CTCAACCGGGAGTCTTTCTGGACGCAGTGGAAGGACGTGAACAAGTGCAA
ACTTGCGATTACCGCGGCGAAGGAGGAAGAGACGCAGAGGGAGAAGGACA
AGGCGGCCGGGGTCGTCGCGCGCGCCCCGTCGTACCCCAACAAGCGGCCG
CGGCCCTCGGCCTCCGTGGCGGCGGGGGAGAGAGCCAAGTACTCGCCGCT
CGGGGCCGGCTTCCCGCTGGAGAAGATGGTGAACAAGTGCAAACTTGCGA
TTACCGCGGCGAAGGAGGAAGAGACGCAGAGGGAGAAGGACAAGGCGGCC
GGGGTCGTCGCGCGCGCCCCGTCGTACCCCAACAAGCGGCCGCGGCCCTC
GGCCTCCGTGGCGGCGGGGGAGAGAGCCAAGTACTCGCCGCTCGGGGCCG
GCTTCCCGCTGGAGAAGATGGTGAGCAAGCTGCGGGCAGGCGTCCCGACG
TCTCAGGAGCACCTCGAGGACCAGCGGATGTGTGCGGAGGACCCCGATGT
GAGCAAGCTGCGGGCAGGCGTCCCGACGTCTCAGGAGCACCTCGAGGACC
AGCGGATGTGTGCGGAGGACCCCGATACCCCCGCCTCGGAGCTGCCGAGC
GCAAGCCCCCTCTACACCTGGCGGGCGCTACGCCTGCTCGGCGGGGAGAA
CCCGGCGAACCTCGTGGGGTGCTACGACGGAGACCTTGTCAAGACCCCCG
CCTCGGAGCTGCCGAGCGCAAGCCCCCTCTACACCTGGCGGGCGCTACGC
CTGCTCGGCGGGGAGAACCCGGCGAACCTCGTGGGGTGCTACGACGGAGA
CCTTGTCAAGGCCATGGAAAGACTCGACAAGGCTCAAGCCGATGCCGAGG
CGGCGGCGAAGGCGGCGGAAGAAGCGGCGGCGGCGAAGGCCATGGAAAGA
CTCGACAAGGCTCAAGCCGATGCCGAGGCGGCGGCGAAGGCGGCGGAAGA
AGCGGCGGCGGCGAAGGCAGCGGAAGAAGCGGCGGCGGCGAAGGCGGCGG
AAGAAGCGGCGGCGGCCAAGGCAGCGGAAGAAGCGGCGGCGGCGGCGGCG
CCCACACAACCGACTAAGGACGAACCTACCGTAGACCCTCCTGCGGCAGC
AGAGGCAGCACCTGCGGCCGAACCGGTGGGAGGAGATTCAACGGCAATGG
CTGTAGACGGAGAAGAGGAGGGCCGGAACGTGGAGGTAAAAAAAGAAGCG
GCGGCGGCGTCAACAAGTGGCGAGGCGGCCGTTCCCGCTGTCGCTGTGTC
CGCCGACGCATCCGGTGCTGCTGACGCTGCCGCCAAGGCTGCCAGTGCGA
GTACTGCTGCCGACACCACTCCCGCTGGTGATAGGGCTGACGACAACGGT
CTGGCCACTGACGGGGCCGTGGTTGCTGGTGCCGTCGTGACTTCTGCAGC
CGCCACCGATGCCACTGCCTCCAAAGCTTCCGCTACGCCTGCTGATGCCC
CCACGGACCCTGATGGCAACGGTTTAGCAGTCACGGAAGGCGCGGCGGCA
ACGGCCGCCGTTGAGGGAAGTAGCGACAGCGTCGTTAGCCCACCGCAAGA
AGAAACACCCGACGGCGGCGGCGGCAGCGAGAAGACGAACGCCGTCGCGG
ATTCAACGGCGCCTGCTACGGACGCAGGGAAGGAAGCGGTGGCGGAGGAA
GCCCCAGCGGCGGTGACGGCAGCGGCGGCGGAAAAACCTGCGCCTTCACC
TGCCAGAGTGACTAGGAGGAGCTCGAAAAAGTAGGCAGCGGAAGAAGCGG
CGGCGGCGAAGGCGGCGGAAGAAGCGGCGGCGGCCAAGGCAGCGGAAGAA
GCGGCGGCGGCGGCGGCGCCCACACAACCGACTAAGGACGAACCTACCGT
AGACCCTCCTGCGGCAGCAGAGGCAGCACCTGCGGCCGAACCGGTGGGAG
GAGATTCAACGGCAATGGCTGTAGACGGAGAAGAGGAGGGCCGGAACGTG
GAGGTAAAAAAAGAAGCGGCGGCGGCGTCAACAAGTGGCGAGGCGGCCGT
TCCCGCTGTCGCTGTGTCCGCCGACGCATCCGGTGCTGCTGACGCTGCCG
CCAAGGCTGCCAGTGCGAGTACTGCTGCCGACACCACTCCCGCTGGTGAT
AGGGCTGACGACAACGGTCTGGCCACTGACGGGGCCGTGGTTGCTGGTGC
CGTCGTGACTTCTGCAGCCGCCACCGATGCCACTGCCTCCAAAGCTTCCG
CTACGCCTGCTGATGCCCCCACGGACCCTGATGGCAACGGTTTAGCAGTC
ACGGAAGGCGCGGCGGCAACGGCCGCCGTTGAGGGAAGTAGCGACAGCGT
CGTTAGCCCACCGCAAGAAGAAACACCCGACGGCGGCGGCGGCAGCGAGA
AGACGAACGCCGTCGCGGATTCAACGGCGCCTGCTACGGACGCAGGGAAG
GAAGCGGTGGCGGAGGAAGCCCCAGCGGCGGTGACGGCAGCGGCGGCGGA
AAAACCTGCGCCTTCACCTGCCAGAGTGACTAGGAGGAGCTCGAAAAAGT
AG
back to top