mRNA_E-siliculosus-1a_F_contig1667.3748.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1667.3748.1
Unique NamemRNA_E-siliculosus-1a_F_contig1667.3748.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 2.960e-184
Identity = 282/305 (92.46%), Postives = 287/305 (94.10%), Query Frame = 1 
Query:  856 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVSGMRGEDTILQSFIAFVGMSWCSSKTRIRWATACIRWRLGGRRNTSPQDRPRRPSLKMFLQGSTGVCGVDGRPVVMVRRPPESSTVLGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGVFQSLSSSGEYGNGIGGGNGGVTATHPRRTSSTDSSRPMLRRWSSSTASR 1770
            MLTFHKRMSIVTDTLSRASTHL+HFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAW+SV RISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGV SGM GEDTI QSFIAFVGMSWCS  TRIRWATACIRWRLGGRRNTS      RPSLK+FLQGSTGVCGVDGRPVVMVRRPPESST+LGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGG FQS SSSGEYGNG GGGNGGVTAT+ RRTSSTDSSRPM RR SSSTASR
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVASGMHGEDTIFQSFIAFVGMSWCSLTTRIRWATACIRWRLGGRRNTS------RPSLKIFLQGSTGVCGVDGRPVVMVRRPPESSTILGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGSFQSPSSSGEYGNGTGGGNGGVTATNLRRTSSTDSSRPMQRRPSSSTASR 299
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 508 bits (1309), Expect = 2.260e-172
Identity = 246/270 (91.11%), Postives = 259/270 (95.93%), Query Frame = 1 
Query:    7 VTFTRRNRLSSDKCSSSSSGDYYDICLADEGTNKTTYTPPQPWGFFRPEEEMIYSGVASGYPVLLDTGGLNIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRIRWILGLIFVCMTLAMIRHDTKKWYRARRAKARRNKCHCCCGFTFFTLIILNVLMWVGWASLGQVITSDVVLEGTSTEDDLVLGALIGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQ 816
            VTFTRRNRLSSD+CSSSSSGDYYDICLADEGTNKTTY+PPQPW  FR  EEM+YSGVASGYPVL++TGG NIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRIRWILGLIFVCMTLAMIRHDTKKWYRAR AKARRNKCHCCCGFTFFTLIILNVLMW+GWASLG+VI  DVVL+GTS+E+D V+ AL GQ+LALQEAALFSW+LHIIFLLTTLAGLYRWIFQ
Sbjct:  256 VTFTRRNRLSSDECSSSSSGDYYDICLADEGTNKTTYSPPQPWASFRQSEEMVYSGVASGYPVLIETGGFNIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRIRWILGLIFVCMTLAMIRHDTKKWYRARHAKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGKVIAFDVVLQGTSSEEDSVMAALTGQILALQEAALFSWSLHIIFLLTTLAGLYRWIFQ 525
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: A0A6H5JES1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES1_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 5.950e-86
Identity = 154/217 (70.97%), Postives = 160/217 (73.73%), Query Frame = 1 
Query: 1180 EAYRGVVSGMRGEDTILQSFIAFVGMSW--------------------CSSKTRIRWATACIRWRLGGRRNTSPQDRPRRPSLKMFLQGSTGVCGVDGRPVVMVRRPPESSTVLGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGVFQSLSSSGEYGNGIGGGNGGVTATHPRRTSSTDSSRPMLRRWSSSTASR 1770
            +AYRGVVSGMRGEDTIL SFIAFVGMSW                    C  KT IRWATA IRWRL GRRNT PQD PRRPSL+MFLQGSTGVCGVDGRPVVMVR  PESST+LGRQL              ALIEA PVPARVA RLVRKIVH+WVFRSDERITGGV QS SSSGEYG+G GGGNGGVT    RRT  TDSSRPMLRRWSS + SR
Sbjct:   13 KAYRGVVSGMRGEDTILPSFIAFVGMSWWVLHSRQTARQPEQILTSVSCVLKTGIRWATAYIRWRLAGRRNTPPQDGPRRPSLRMFLQGSTGVCGVDGRPVVMVRGLPESSTILGRQLPA------------ALIEAFPVPARVAGRLVRKIVHEWVFRSDERITGGVSQSPSSSGEYGSGTGGGNGGVTVLSTRRTYCTDSSRPMLRRWSSFSPSR 217
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: D7FTQ7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ7_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 2.130e-74
Identity = 130/136 (95.59%), Postives = 131/136 (96.32%), Query Frame = 1 
Query:  856 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVSGMRGEDTILQSFIAFVGMSW 1263
            MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTL +AW SVTRISLGESENFYPQILDAQPTVGPV VVLYQVLGVVLLLNVVIAI LEAYRGVVSGMRGEDTI QSFIAFVGMSW
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLVEAWGSVTRISLGESENFYPQILDAQPTVGPVAVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTIFQSFIAFVGMSW 136
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 7.270e-67
Identity = 131/191 (68.59%), Postives = 138/191 (72.25%), Query Frame = 1 
Query:  616 MWVGWASLGQVITSDVVLEGTSTEDDLVLGALIGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTMKKEFMLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAY 1188
            MW+GWASLG+VI +DVVL+GTS+E+D VL A                                                 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLE +
Sbjct:    1 MWLGWASLGKVIANDVVLQGTSSEEDSVLDA-------------------------------------------------MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: A0A6H5JIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW8_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.700e-49
Identity = 108/171 (63.16%), Postives = 117/171 (68.42%), Query Frame = 1 
Query:  658 DVVLEGTSTEDDLVLGALIGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTMKKEFMLTFHKRMSIVTDTLSRASTHLDHFLFVFFL--------------------------VILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDA 1092
            DVVL+ TS+E D VLGAL G +LALQEA LFSW+L+IIFLLTTLAGLY WIFQ             M TFHKRMSIV DTLSRASTHL  FLFVFFL                          V+LAFAALT+LLVGSSTKE STLEDAW+SV RIS GES+N YPQILDA
Sbjct:    4 DVVLQDTSSEADSVLGALTGPILALQEAELFSWSLYIIFLLTTLAGLYPWIFQ-------------MFTFHKRMSIVPDTLSRASTHLTQFLFVFFLERLTQLPDKRCLGVLVLVVVLTTPMVVVLAFAALTFLLVGSSTKEISTLEDAWRSVIRISPGESDNLYPQILDA 161
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: A0A6H5JEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ3_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 9.270e-42
Identity = 85/124 (68.55%), Postives = 91/124 (73.39%), Query Frame = 1 
Query:    7 VTFTRRNRLSSDKCSSSSSGDYYDICLADEGTNKTTYTPPQPWGFFRPEEEMIYSGVASGYPVLLDTGGLNIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDH 378
            VTFTRRNRL SD+CSSSSSGDY DICL+ EGTNKTTY                 S  + GYP +  +      LNFGYCTLLVMEDLDVIPR EVRSVNVQLVTYNGNQGSAFGSIN+GFTFDH
Sbjct:    3 VTFTRRNRLWSDECSSSSSGDYCDICLSGEGTNKTTY-----------------SRHSHGYPSVRASKWSTAELNFGYCTLLVMEDLDVIPRHEVRSVNVQLVTYNGNQGSAFGSINLGFTFDH 109
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 3.130e-24
Identity = 106/372 (28.49%), Postives = 170/372 (45.70%), Query Frame = 1 
Query:  187 YPVLLDTGGLNIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRI-RWILGLIFVCMTLAMIRHDT-KKWYRARRAKARRNKCHCCCGFTFFTLIIL--------NVLMWVGWASLGQVITSDVVLEGTSTEDDLVLGALIGQVLALQE----AALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTMKKEFMLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVV--SGMRGEDTILQSFIAFVG 1254
            Y +  D G  N GLNF  C +L +     +  D VRSV+++  TYNG     F  ++I   F  GGEV+    V  + +    G     + R I    F  M +  I  D  + W   R  + R +        T  T + L        N+++WV  A           L   +  +         QV A  E     AL  W      +  ++ GL R                 ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S+  F+T   ++ ++TRI+LGE +N YP +++       +++V YQ L  +LLLN+VI+ILL+A++ V   + +   DT+ Q+ +  +G
Sbjct:   28 YSITTDIGVFNSGLNFNLCGMLAILGGPDVMTDAVRSVSLRFNTYNGQCDGLFSFVDITALFTLGGEVKMVTSVEVFSMPFFFGSSPAIVGRAIAMFAFGLMLVIYIGKDVLRAWREVRDGRHRLSMSLRHVPVTTATALNLVGDCVFLWNLVLWVNVAVTAAKFELIPTLSYNNASE---------QVRAFSEELALVALERWKRDAAAVAGSIFGLTRLF--------------IMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLG 376
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: A0A8J5X0G5_DIALT (PKD_channel domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0G5_DIALT)

HSP 1 Score: 73.2 bits (178), Expect = 8.760e-10
Identity = 77/262 (29.39%), Postives = 118/262 (45.04%), Query Frame = 1 
Query:  589 FTLIILNVLMWVGWASLG-QVITSDVV-LEGTSTEDDLVLGALIGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTMKKEFMLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVSGMRGEDTILQSFIAFVGMSWCSSKTRIRWATACIRWRLGGRRNTSPQDRPRRPSL 1368
            + L +LN+++WV +A  G Q    D V  +GT   D   L     + L L E A   +    I     L  L   +F+              L FH++ S+VT TL RA   L HFL VF +V++ +A + + ++G   + ++TL  A  S+  + + +    +  I+D  P VGPV    Y +L  ++L+NV++AILL+AY  V                    S  S  T   W    +++RL     TS  DR   PSL
Sbjct:  461 YALAVLNIVLWVKFAVEGAQYRMPDFVEKQGTYAPDSHELWGEFMENLGLLETAEDDFVNFTIVQSVLLMVLTFRLFK-------------FLAFHQQFSLVTATLLRAGASLAHFLVVFAIVLVMYAFVGFNMLGHKLERYNTLGKAINSMCSMLVFDDTVSFADIMDVAPLVGPVFYWSYFILSSLMLINVLLAILLDAYASV--------------------SRASRTTNFIWVDLIVQYRLF---RTSLTDRSVYPSL 686
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Match: A0A6G0R7K6_9STRA (5'-nucleotidase n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R7K6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.680e-5
Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 1 
Query:  862 TFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVVSGMRGEDTILQSFIAFVGMSWCSS 1272
            T  KRMS++   L RA+  L  F   F + I AFA +  LL G   + FS+L  A  ++ +   GE +  Y  + D+    GP+  +LY +L +++L+NV +AIL +AY   ++    ED  L++      M W  S
Sbjct:  764 TVSKRMSLLLRMLGRAARDLAWFFVCFLVCICAFAQIGLLLFGLDVRGFSSLGSAIVTLLQAVAGELD--YAGMADSHRVAGPIFYILYYLLLLLILVNVFLAILNDAYMQTITEQEEEDEELETAAHNHVMGWDES 898
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5L574_9PHAE2.960e-18492.46PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
D7FTQ4_ECTSI2.260e-17291.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JES1_9PHAE5.950e-8670.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ7_ECTSI2.130e-7495.59Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FTQ6_ECTSI7.270e-6768.59Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JIW8_9PHAE2.700e-4963.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEJ3_9PHAE9.270e-4268.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W7_ECTSI3.130e-2428.49Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A8J5X0G5_DIALT8.760e-1029.39PKD_channel domain-containing protein n=2 Tax=Diac... [more]
A0A6G0R7K6_9STRA2.680e-532.855'-nucleotidase n=2 Tax=Phytophthora fragariae Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1667contigE-siliculosus-1a_F_contig1667:14830..24848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1773
Model size1773
Exons13
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EggNOG OGsKOG3599@1,KOG3599@2759
EggNOG free text desc.detection of mechanical stimulus
Seed eggNOG ortholog2880.D7FTQ7
Seed ortholog evalue1.2e-61
Seed ortholog score244.6
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928168.0810564-CDS-E-siliculosus-1a_F_contig1667:14829..151021622928168.0810564-CDS-E-siliculosus-1a_F_contig1667:14829..15102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 14830..15102 -
1696318832.8786185-CDS-E-siliculosus-1a_F_contig1667:14829..151021696318832.8786185-CDS-E-siliculosus-1a_F_contig1667:14829..15102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 14830..15102 -
1622928168.10136-CDS-E-siliculosus-1a_F_contig1667:15977..162151622928168.10136-CDS-E-siliculosus-1a_F_contig1667:15977..16215Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 15978..16215 -
1696318832.890337-CDS-E-siliculosus-1a_F_contig1667:15977..162151696318832.890337-CDS-E-siliculosus-1a_F_contig1667:15977..16215Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 15978..16215 -
1622928168.1162233-CDS-E-siliculosus-1a_F_contig1667:16926..170061622928168.1162233-CDS-E-siliculosus-1a_F_contig1667:16926..17006Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 16927..17006 -
1696318832.9010618-CDS-E-siliculosus-1a_F_contig1667:16926..170061696318832.9010618-CDS-E-siliculosus-1a_F_contig1667:16926..17006Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 16927..17006 -
1622928168.1302722-CDS-E-siliculosus-1a_F_contig1667:17727..179611622928168.1302722-CDS-E-siliculosus-1a_F_contig1667:17727..17961Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 17728..17961 -
1696318832.9210718-CDS-E-siliculosus-1a_F_contig1667:17727..179611696318832.9210718-CDS-E-siliculosus-1a_F_contig1667:17727..17961Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 17728..17961 -
1622928168.1510825-CDS-E-siliculosus-1a_F_contig1667:18557..186501622928168.1510825-CDS-E-siliculosus-1a_F_contig1667:18557..18650Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 18558..18650 -
1696318832.9338686-CDS-E-siliculosus-1a_F_contig1667:18557..186501696318832.9338686-CDS-E-siliculosus-1a_F_contig1667:18557..18650Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 18558..18650 -
1622928168.164474-CDS-E-siliculosus-1a_F_contig1667:19266..194131622928168.164474-CDS-E-siliculosus-1a_F_contig1667:19266..19413Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 19267..19413 -
1696318832.9428263-CDS-E-siliculosus-1a_F_contig1667:19266..194131696318832.9428263-CDS-E-siliculosus-1a_F_contig1667:19266..19413Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 19267..19413 -
1622928168.183915-CDS-E-siliculosus-1a_F_contig1667:20018..201021622928168.183915-CDS-E-siliculosus-1a_F_contig1667:20018..20102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 20019..20102 -
1696318832.9529905-CDS-E-siliculosus-1a_F_contig1667:20018..201021696318832.9529905-CDS-E-siliculosus-1a_F_contig1667:20018..20102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 20019..20102 -
1622928168.1998854-CDS-E-siliculosus-1a_F_contig1667:20434..205051622928168.1998854-CDS-E-siliculosus-1a_F_contig1667:20434..20505Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 20435..20505 -
1696318832.970414-CDS-E-siliculosus-1a_F_contig1667:20434..205051696318832.970414-CDS-E-siliculosus-1a_F_contig1667:20434..20505Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 20435..20505 -
1622928168.212032-CDS-E-siliculosus-1a_F_contig1667:20872..209731622928168.212032-CDS-E-siliculosus-1a_F_contig1667:20872..20973Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 20873..20973 -
1696318832.9820743-CDS-E-siliculosus-1a_F_contig1667:20872..209731696318832.9820743-CDS-E-siliculosus-1a_F_contig1667:20872..20973Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 20873..20973 -
1622928168.2273748-CDS-E-siliculosus-1a_F_contig1667:21429..215021622928168.2273748-CDS-E-siliculosus-1a_F_contig1667:21429..21502Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 21430..21502 -
1696318832.991227-CDS-E-siliculosus-1a_F_contig1667:21429..215021696318832.991227-CDS-E-siliculosus-1a_F_contig1667:21429..21502Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 21430..21502 -
1622928168.2418246-CDS-E-siliculosus-1a_F_contig1667:23049..232031622928168.2418246-CDS-E-siliculosus-1a_F_contig1667:23049..23203Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 23050..23203 -
1696318833.0008466-CDS-E-siliculosus-1a_F_contig1667:23049..232031696318833.0008466-CDS-E-siliculosus-1a_F_contig1667:23049..23203Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 23050..23203 -
1622928168.2530973-CDS-E-siliculosus-1a_F_contig1667:24132..241821622928168.2530973-CDS-E-siliculosus-1a_F_contig1667:24132..24182Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 24133..24182 -
1696318833.0192513-CDS-E-siliculosus-1a_F_contig1667:24132..241821696318833.0192513-CDS-E-siliculosus-1a_F_contig1667:24132..24182Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 24133..24182 -
1622928168.2647064-CDS-E-siliculosus-1a_F_contig1667:24673..248481622928168.2647064-CDS-E-siliculosus-1a_F_contig1667:24673..24848Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 24674..24848 -
1696318833.0354512-CDS-E-siliculosus-1a_F_contig1667:24673..248481696318833.0354512-CDS-E-siliculosus-1a_F_contig1667:24673..24848Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1667 24674..24848 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1667.3748.1prot_E-siliculosus-1a_F_contig1667.3748.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1667 14830..24848 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1667.3748.1

>prot_E-siliculosus-1a_F_contig1667.3748.1 ID=prot_E-siliculosus-1a_F_contig1667.3748.1|Name=mRNA_E-siliculosus-1a_F_contig1667.3748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=591bp
LQVTFTRRNRLSSDKCSSSSSGDYYDICLADEGTNKTTYTPPQPWGFFRP
EEEMIYSGVASGYPVLLDTGGLNIGLNFGYCTLLVMEDLDVIPRDEVRSV
NVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGND
RIRWILGLIFVCMTLAMIRHDTKKWYRARRAKARRNKCHCCCGFTFFTLI
ILNVLMWVGWASLGQVITSDVVLEGTSTEDDLVLGALIGQVLALQEAALF
SWALHIIFLLTTLAGLYRWIFQARDRSKNTMKKEFMLTFHKRMSIVTDTL
SRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRIS
LGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVV
SGMRGEDTILQSFIAFVGMSWCSSKTRIRWATACIRWRLGGRRNTSPQDR
PRRPSLKMFLQGSTGVCGVDGRPVVMVRRPPESSTVLGRQLSFNCPRYIT
VTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGVFQSLSSSGE
YGNGIGGGNGGVTATHPRRTSSTDSSRPMLRRWSSSTASR*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1667:14830..24848-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1667.3748.1 ID=mRNA_E-siliculosus-1a_F_contig1667.3748.1|Name=mRNA_E-siliculosus-1a_F_contig1667.3748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10019bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1667:14830..24848- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCAGGTGACATTCACCCGCAGAAATCGACTCTCGAGCGATAAGTGCTC
TTCATCCTCGTCCGGCGACTACTACGATATCTGTCTAGCCGACGAGGGTA
CCAACAAGACCACCTATACCCCGCCACAGCCATGGGGATTCTTCAGACCC
GAAGAGGAAATGATCTACAGCGGAGGTTCGTGACTTCGCACGCTGTTTCG
TGTAGTCACCAGCTGATAAAGGGGGCTCACTCGCTGTTCTTTGTAGTCAT
CAGCTGATAATGGTGAAGTCGTGGCTCCGTTATAGGAGGGTACCTTATAT
GGGGGGACTCCGATATGGTGGGGTCGACATCGGTTGTCACGGACTCGACC
CGCTACAGGATAACTATAGTTGGGTACCCTCTTATTCCGGGATAAGAGGG
GGCTCCGATGTAAGACGGTCAGAGGTCTTTGTCACACCACCCTTTTATGT
CGGAGCCACGACTGTAGTACCTCCTCTTCGCGGACCGCACAACCAATCGG
CGCTACAGCAGTACCTGCTACAGTTCGGTGTACCTCATCGTTGACTGCTT
GGTCCTTCAAGGCTTGCCCGCGGGGGGACTAGTCGGATGTTTTGGCGCAC
CCTTTGTGATTCGTGTTTTCTCTGGTGCTAAACCTCCTCCCTACCCTAAC
CCATTGCTTTGCTCAGTGGCATCTGGATACCCTGTGCTCCTCGACACCGG
AGGCCTCAACATTGGGGTAAGTGAATGGCACACCTGCACAAGTGTTGCCA
CGTCTACGTTCGAGTAGAGGGGAAACTTGCTTTCTTGCGTGGATATCGGG
GCTGCAGGCCCTTGATATTTGTGAACAGCCCTCACACCCGGCCGGCACCG
AGATTGAACCAGGAGATGTCCTTCCAGCTCCATTTTTACTTCACATAGCG
TGTAGAGGGGGGCGGAGGGCTCTAAGTGTCTCTGACGTTTTATTGTTTTG
CTGACCCGTCGGGTCCATTTTGTTTGGGTACACATTCTTTTGGGAAGTTT
GCCTGTGACCACGGGAATTGACCGCGTCAAGTGGTAGATCAGTACGGACA
GATGAAGAACAAGGGCAACACCTCAGACTGGCGCCGAAACTCCTGCTGAG
GTAGAGAACATGACGTTGCTTTTCACATGCCCGCATGTGAGGTGCGCCTA
TGGCCTTTGCGACGCTGGCTGTCATACATCCTTCATTTGGTTTTGCGCTG
TGCATAGGATCTTGTGTGCTCGAAACTAACAAAGCAGTATGGGCATACAG
GAGGCTAGACATTTCCTAGGGGGGGAGGGGGTGCGCGCCGCAGCTATTAA
CAACGGTTGCTTGTCGACTGGCTCGAAAAGACTCGTGGGTGAGTATTTTG
CCAGCCTAATGCCCGTTCCATCCGACGACATCGAGCCTTCCCAGGTTTGC
AACGACGACCACGTGCACAGGCAGCCATGGAGCTTTTACACTGGTCTCAC
AGAAGCTCTGAACTGTCCTGTGTACGTCTTTCTGCATATTGCCATCCTCT
CGCCTCTCTCCTCTACAAGAGACGGAACGCCATGTGATACCCGACTGCCG
GAGAGATCCCCCGATTTCCACATACCTCGCCATGTTGATGCACGATCGGC
TTACGCGCAAATACGTGCGCGCCATGGTTCCCGCCATACATGCAGCTCAA
CTTTGGGTACTGCACCCTCTTGGTGATGGAAGATCTGGACGTGATCCCTC
GGGACGAGGTTCGCTCCGTGAATGTTCAGCTCGTGACCTACAACGGGAAC
CAGGGGTCGGCCTTCGGCTCCATCAACATCGGCTTCACTTTCGATCACGG
TAAGTGGATTTGGTTGGTTCAGGTTGTGGTAGGGCTTTGGCTTTTCTCGG
CTCCCATCAAGGCTTGAGATCCATCGCGTGGAGCGGAATTTGGTTGGGCT
GGAAGTGAGGTTTCTTTGTTCTTGTGCTGCGAAATTGGGCCCACTTTCGA
CGGCGTTAATCTGTTACTGTTTTTTCTGGTCAACCGTCGAATCTTTGCTC
TGATACCGTCGAATCTTTGCTCTGATACTGTCATAACCAGGTTCAAGGGC
GCACAGAACATTTTGGTTATAGTCTGGGAAAATTCCGTATTGTTGGGTTA
GTTTTGTGAAAACCAGGTTCACTGTCCGTCGCGTTTTGGTTTTGGTTTTA
CGGTAATTGCTTATCTGTGCTCATAGTTCTATCAACATCGGGTACCCTTT
CGATCGCGTTCACCGGGTTTTAGGTTCAGTGCGGTATGGCGTATCTTTGC
TCTGGTATTATCATCCACGGAATCAGATTCAATCGTCGGCAAGCGGAGTC
TGGTCAAAGAGGTTCGGCTCATGTTTGCCTTGCTTTCCTCAAAATCGGGT
TCGAATTCAATCCCCCTGAATTCTGGTTACCTTGCTCTAGCTCCATGTCC
ATCGCCCAAGGCTTCCACACCGGCGCGGCGGGTTTCGGTTGGACAGGTTT
AGGCTTAGGGTTGTCTCTGACCCTGTCAACATCGCACACGGCTTTGATCA
CGACAAGCGAGGTCGCTCGTCGTGGGCGGGAGCGCCTGCGCCGAGATAGC
GGTGCCGGATTGGTTTCACACTACTGTAGGGCGTTGGAGATGTATCGTTC
AGCGTTGGTGTCTCTTGGTTTCAGAACCGTTGTGCTACTTCACGTTGTTT
CCGATGTACAGAGGCACTGTGCTGCGGTTGTCGTTCTGTCTCACGAGTTT
CGAGTCGAGCAGTTCCGATGTTTGTTTTTGCGGTGGTTTGCGTAGGATCA
ACGTGGGCGTGGAAGACTCACGAAAACATTTTCTCGTCGAAAGTGTTCGT
AGGTGGAGTTGGTCTTGGGTTATGGTCTGTGTGACCACGGGTTGGAGTAA
ACAGCACATGTGGTTCGAGCGCTGATTTGAAGTGAAAAAAAAAAAGAAGG
TCCGTGGTTGCCATGAAGCACTGCCAATTTTGCTCCCTTGTGTCGGATTT
CATTCTGGTACTGCTACTGGGGGCACAAAATCCCTTGGATCCATTATGCC
AGAGATCATGTCCCTCTCTTCGAGAACACAGACAGAAAATCAGTTCGTTT
GTGCAATAGTATAGCATCCAGTTTTGAGATGGAACTGATGGTTTTGCAGT
GGACTGAACGTAATCGCGCGAGAAGTCTTCGGGGGTACACAAGCGCACAG
ACATCGGAGCAGCGTTCAAGTGGAGATAAAACAAACCAACGAACATCGAC
AGTAGCAGCATCAGCGGTAAACAACAGCGACGAACACAACGAAAACACAC
TACAGTATCACCACCACCACTATGAACACCACTACCAACATTTCCCCGCC
ATCTTTTTTTCGATCTTGTGTTCTCTGGTTCTTTTTTTCTACGCAGGGGG
TGAAGTAGAGGCACACGAGCTCGTGACGGCCTACATTCTGACGGGAAACG
CAGGGCAGGGAAATGACAGGTGCAGTATGAGACGCAGATACGACAGGAGT
AGCAGCCGCCTTTCTACGGGACGAGTAGCAGCAGCAGCAGCATGAGCAGC
AAGATCACTGTAGTAGAAGTTGTATTGACATCGACAGGTTCACTCCGTCC
CTCGCATGAAGCCTTATGTCGCTGGCTGCTTGAACCCCTACGTTCGGCTT
GAGTGTTGCCTTATGTCGACAGATGAAATTCGCAAACGTGGGCCGTGTAC
CACATCCCGTCGGGCCCACGCCGCAAAAATCTGCGGGCCCCTCACGGCGT
TTTCACTTGCCATTCTCGTTCTCTCCCCCATTATCTCGCTCGTTGTCGCT
CAGAATGGAAATACCAAGATGTTTCCCTCTCCGTCTCCCTTTCTGTTTCT
CCTTCTCCCCGACTGTCTACCATTCTCGCCCATCTCTCTCTCTCGCGCGC
ACCGTGTACGTACGCGTACGCGCAGGATCCGGTGGATCCTGGGGTTGATA
TTTGTGTGCATGACGCTGGCCATGATCCGGCACGACACGAAGAAGTGGTA
TCGAGCCAGGCGTGCCAAGGCCAGGCGTGAGTTTTGGTTTCTGTTCTGCA
GCACAGCGGTAGCTGCGTCGGCGGCGGTCTCCAGCAGTCTAGCGCTGGGC
CGCGTTGGGATCAACAGCGGTTGACGAGCCTACGAATATCGAAACACGGC
GACCCCTTATTGTTTCATTGGATCACAACCAGATGCAGTTTCCCCATATT
GCAAGGCACGCAGGTGGTGAAAACGGTTTCGTGACCCCGTTGTTCGTCTG
TCCAGATTCAACGTTGTCCCCGCATGGTGAACAGCACGCGCTGCGGCATT
TGACCGCTAGAAGCCGCGCCCCCCCGCTGGGCTTGTGCCGGCACCTCAAG
CTCTTCAACCCCCTGTTCCGCCCTCTCCGTTTCCGGTCCGCAGGAAACAA
GTGTCACTGCTGCTGCGGCTTTACTTTTTTCACTCTGATCATCCTCAACG
TTCTGATGTGGGTGGTGAGTTGCGAGGAAGGCAGGCAGGCAGGCAGGCAG
GCAGGCAGGCCTCCCGTTGCTTCGTTTTTGCAAGCGCAGCACTCTTGTCG
CCTGTGGTGATACTCGGCTTCGTGTTTGCTCTTGTGTTTGACCCGCTTTT
TCTTGCCGCATGGGTGAGAGCATGGTATCCATCCCCTTGGGCACCGCTAC
TGTGCCCCCATAGCGTACGTACATCACGACCGTGGGTCCTTCCTCAATCA
GCCTTTTCGACTTTAGAATTACGTCTACCCCGGAATTTCCTCACAACCTC
GCCGTCTTTGCCCCTCGCCACACATCCTCACTATCTCTTCGGGCAGGGCT
GGGCATCTCTGGGGCAGGTCATAACGTCCGATGTGGTTCTTGAAGGCACC
TCCACCGAAGATGACTTGGTCCTGGGCGCGGTACGTTGGAAAATTTCGAA
CGCACGTTCACCGGCGCCACTAGTCTCGATGGAGCAGCCTTTTGAGAGCT
CTCGAACGTTTGCCTCGGCAAATCGTGGGATCCGTTCTCGCTGCTTGATT
AAACAACGCGGCCTAGCGTTTGGGTGCTTAGGCGAAAGAGGCCAGACAAA
CTCGAGGATATTTTGCTCTCTTGTTGTGTGTAGCCTCCTTCAACGATACC
TATACCTGAGTCATCGATCCCTGAGTCATCGATCCCTCCGCTCTCCGCCA
CTGAATGAACGTATCCCCAAAAATTGCACCAAGGTCGAATGGTTACCGGC
GATCATTGCTCATCATCGAAACATGGTAGTGAATGCTTTATGCGCGTGCA
TTTTGTGTCCTGATGACCAGCCCAACGAGCAGAGGCCGTGGAATTGCCCG
CAGCTCTCCAACATGCAAGTGCGGCAGCCAACCGGCTACAACTCAGTGCG
CGCGCAGCAGACGATATTTTGCTTGCATCGAAACCGGTTATTGTGCTCAG
AGACCGACCGCCCTTGAACCCACACGCCTATCATATTGCTGCTTGTCCGC
TCGCCGCGTCGAATAAACCACAATGATCGACACAGCTAATAGGGCAGGTT
CTGGCTCTCCAAGAAGCGGCTCTTTTCTCGTGGGCACTCCACATCATTTT
TCTCCTCACAACCTTGGCCGGACTCTACCGCTGGATATTCCAGGCAAGAG
ATCGATCCAAGAATACGATGAAAAAGGAGTTTGTTCCGAAGGTGTTCGTA
GTTGTAGGTATGGTGAAACATGTCGATATTCACTGGTTTTGATAGTTGGA
ACAGTTGCTCTCGAAACGGTGGGCGGAGAAACGTACAGGGGATCGTGAAA
CCGCCGGTTCCCGGGCGCTTGGAGGAAATTCGGCAGACGAAAGTCCATTT
TGTTGAACACATCTTTAAGTGAAGTAGGTACGCGGGTCAGAGAGAACCAA
TCGCCGTCACACACGATGGCGGCGCTCCTGATGACGTTTTACGGAGATCG
TGTGTGGTTTGTCCGTATCGTGCGTGGCTACACCAGCTGGGTACCAACAT
TCGTATCTGCGTGCTTTTTTCGTGTCGACGTTCGTGGCAAGTAATCGAAA
GATAGGCTTGAGGTGGTGCTGGTGGAATTTTTTGTCAGGCGTGCTCTGTG
CGAGGACGGCGTATTTCGAGGGGGAGTCTTTTGTTTCCGTCGCTGATTTT
GGACTTCAAACGTTGGGTGGTTCTCGGCTCTGCTCTTCTTTGAACAGTTT
GTCGCCTTCTGCTGACACGTGACATTGTTGGTTCCACCTGCGACAACCGC
GTCCTTCTTCCCATTTTTGGCTCCACCACGCGTCTCCGCTCAACGCAGAT
GCTCACGTTCCACAAGCGCATGAGCATCGTCACCGACACCCTCAGCAGAG
CGAGCACCCACCTCGACCACTTCCTGTTCGTGTTTTTCCTGGTAAGGCTA
ACAGCGTTGCCGGACAAGAGGTGTGTTGGGGTACTGGTGCTGGCGGTAGT
ACTGACGAGGCTGTTGGCGGCGCATTGTACGTGGTCGTGGTGGTCAGTGG
TAGTGGTTCGCCTCTCGGTGCGGTCGCATTTTCGTCCGCTTTCGTTGTGG
ACCGAGGTGAAAAATGGATAGTTTTTTCTGTTGAAATCTATTGCTAGTAT
TGAAATGTCCACAACGACGAATGTGATCACACAGTAGTGAAGTGTAGCTT
TTCCATTGCTTGCGTTACCGGCGTAGTTGTTTTTGCCAACAACACGCTCG
GCAGGTTTCTCGCTCCTGTACGTGTCCACCACGCAAACACAGATTTAGTT
TCGAATCGCGTGTGGTCGGACGTTGACGACTCGACCTTCGAACGTGTCGA
AGGGTGTGTCGCAAATTTACCGACCAAAGCGCTTAAGCTAGACGCTAAAG
ATTCGACAGGGGACGAACAACACGTGCATACACCTCCCGCGAAGAAGGCC
ATATGAGAGCGTAAATAAAATAAGAAACAAACTGGGATGAAACCTGTTTC
ATTTTTCCTGTTTCATTTTTCCTCTTTCTTTCCCCAGGTAATCCTCGCGT
TTGCCGCCCTCACATGGCTCCTCGTCGGGTCCAGCACGAAAGAGTTTTCC
ACCCTGGAGGACGCGTGGCAGAGCGTGACGCGCATCTCCCTCGGGGAGTC
GGAGAATTTCTACCCGCAGATCCTGGATGCGCAGCCCACGGTCGGGCCGG
TGGTGGTGGTGCTGTACCAGGTCCTGGGCGTGGTGTTGCTGCTGAACGTG
GTGATCGCTATCCTTCTCGAGGTACGGCGTTTGTTGTTGTTGTTGGTATT
GGTGTTGGCGTTGTATTTTCTTGTCCTTTGCTGCTGTAGGTTAAGAGTTG
CTCGTCCTCGTGTTTCGCAAGTTGTGTTGCTGACAAGGACCCTTCCTTGC
GGCTTCGGTTGCTGATGGCACCACCGCTGTTTTTTCTACCGCAGGGTTGT
GGTGGGGTAGCATGGGTTCATGAAGCTTCATGGCAGCTTGGAGGTACTGA
AGATGGTGCATAGTGGTGGATCGAGTGCTCATCCCGAAAGTGATAGATCC
TTCCTTCTCTCGCCGATCCAGCACGTCTTGTTCCGTATTCTTGAGGGTAC
GAATTGGAGTTCCGCGGTACCAAGAAGAAGAAACATGTTGTCTCGAAAAC
AGACGTCCGACCCCGCCCATGCGAAGTAGGGTTATTCTGTTAAAAGCCCG
AGTAAAGAAAGTAGATCGCCCTGCCCGCACTCGTAAACTAAGTAGGAGAC
TTAAGCCGAGAACACCTGTACTGCAGCACTACCACGGCAATGAGCCTCAA
AGAAGCCGTGCTCGCGTCCTCACGAAGCCGGGAATTGCTCGTCTTATGGG
GTCTCCTCCGACCCTTATGCCCCCCCCCCCCCCCCTCCCCACGCAACGAG
AAGATGTACTCTGTCGTGACCTCCCACCCCGATGCCTTTCAGCCGAGCGA
ACAATCCCCCCGGCGCTCGCGCACTCTGTCGTCGTTGTCAAGGCCTACCG
AGGAGTTGTGAGTGGCATGCGTGGCGAGGACACCATACTCCAGTCGTTCA
TCGCCTTCGTCGGCATGTCTTGGTGGGTGCTGCACTCTCGGCAAACGGCT
CGACAACCGGCGCAGATCCTAGCGTCAGTTTCGTGTGTGTGATGCGTGTC
TGCTCGTTTACTTTAGCGACGCCAACGTCCCTCGCGGAGACCACCCTCCT
CAGGGTGTTTGAAAGGGAAGAGCGTAGTACCGCAGGCCCTAAGCTATTTT
GCAGAAGTTTCTTTGATTTTCTCATTCTGCTGGGTAGGTGACCAACGTCG
GGCAGTATTTCCGTGTAGAAAAAACCCGCGCTCGTAAGCTCTGCGGATGG
AATGATCCATGGAGCCCACCATCGGTGATTGGACGTGTACCGCGGACGGT
CTTTTCTGGGTGACGTACCCAATCGGAGATGTTCCGCGAGAGAGGCATGA
CAGGACGGTGCGAAGAAAAGTGGACGCGCAATTTGCTGAATGAACGTGAC
GAGTGGAAAATACGAAATGATAGAAAGCTCCCAACGGGGCCGACATACCC
CCTTCATGTTTTGCGAAGATGTGTTTACCCATGGGTATGACCCATGCAGA
CCTGTACGTTGTTCCACCCTCTTCACGCCATAGTGCCATGTTTGCGGCGC
CCACGTCGGGATCACTTTCGTCCCGGTATCTTTTTGAGATGCATGGTCAT
TTCCGTGCGAGGGCTGCAAAGCCCACGTACAAGCGACGTTAGCGTACGCA
CCATGAACGAGCCCTCCTCTCCGTCGACGGCAGGTGCTCATCGAAAACAA
GAATACGCTGGGCCACCGCCTGCATCCGGTGGCGTCTGGGTGGACGGAGA
AACACCTCGCCTCAGGACAGGCCTAGGCGTCCGTCGCTCAAGATGTTCCT
GCAGGGCTCTACAGGGGTGTGTGGGGTGGATGGGCGGCCTGTGGTGATGG
TCCGGAGGCCGCCAGAGAGCTCGACGGTACTGGGAAGGCAGCTGTCGTTC
AACTGCCCGCGGTACATAACGGTGGGTAGGATATGACGCGGTCGGGAGAC
GGGGGTGGGCTTGTTCGAAGGTACCCTGGAAGACGTCCTTAACCGCCGTG
TCTGATTTTGACGGCACCGAAGTTGACAATGGGGCAATCCTCGGGCATGC
AATTGTTTTGCAAGCTTGGTGTGTTTTGTCAATCCCGATGAGAGGGCGGG
GTTTTCGCGTGACGTGCAGTGATTGCCCCAATCCCAAGTTCTGGAGGAGG
CGGTGGCTGATCGTGGTTGCTGCCAAGCGTTTAGTGTCGCTCATTCACCG
CTTGTCGGCGGAAGCACGAGCCTGTTCTACCTCAGGAGAAGAAGTCCGAA
ACGCACCCCGGTGTCCATCGACAACGGAGGAAATATTAGTCGGAAGGCGC
AAGCAAAATGAGCTGTTATTGCACTGGAAATCGAACATCGTTTTGGGCGC
TGTCCAGCAGGTCGATATTCCTTGCTCAGCTTGCCAGTGGGAACGACTTG
TATCCCGCACACCGATACCAAAAAGGAGAGGAAGGTTATAAACATTAGTG
GGAGGAACGAGACAGCGATATAACGTTGTGCTGAATACCACACGACGGCT
CAGACGGTGCTCGTGGTTCTGAACACTGGACTAAACCCAAGTTTGTTGCT
GTATGTCATGGTTTACCGGTCGTGCAATTCAGCTCTTGGCGGCGGTTGTG
CACCCTTATGCGCGTCTACCACTGATTGATTTGCCATGCTGGCGATTCTG
CCCGCCATGCCACCAACGACCTACCTGAGTAAGCCAGGATGTTCAACACG
TCTGCCCACCAAAGACGGGTCGACTACCACCTCCTTCCCTACAGCAAACC
CCAATCATAAGCACCGCGCCCCTGCTCGTATATCCGCGTTAACAAGGTGA
CCGAAATGCAGGCACTGATCGAAGCCACTCCGGTCCCGGCTCGCGTGGCC
GACCGGTTGGTGAGGAAGATCGTCCACGATTGGGTTTTCCGAAGCGACGA
AAGGATCACCGGAGGTGTGTTTCAGTCGCTGTCGTCGTCGGGAGAGTACG
GCAACGGCATCGGCGGCGGCAACGGCGGCGTGACGGCAACGCACCCCAGG
AGAACGTCCAGTACTGACTCGTCACGGCCAATGCTTCGGCGGTGGTCGTC
GTCCACCGCCTCCCGATAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1667:14830..24848-

>mRNA_E-siliculosus-1a_F_contig1667.3748.1 ID=mRNA_E-siliculosus-1a_F_contig1667.3748.1|Name=mRNA_E-siliculosus-1a_F_contig1667.3748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3546bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1667:14830..24848- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCAGGTGACATTCACCCGCAGAAATCGACTCTCGAGCGATAAGTGCTC
TTCATCCTCGTCCGGCGACTACTACGATATCTGTCTAGCCGACGAGGGTA
CCAACAAGACCACCTATACCCCGCCACAGCCATGGGGATTCTTCAGACCC
GAAGAGGAAATGATCTACAGCGGAGCTGCAGGTGACATTCACCCGCAGAA
ATCGACTCTCGAGCGATAAGTGCTCTTCATCCTCGTCCGGCGACTACTAC
GATATCTGTCTAGCCGACGAGGGTACCAACAAGACCACCTATACCCCGCC
ACAGCCATGGGGATTCTTCAGACCCGAAGAGGAAATGATCTACAGCGGAG
TGGCATCTGGATACCCTGTGCTCCTCGACACCGGAGGCCTCAACATTGGG
TGGCATCTGGATACCCTGTGCTCCTCGACACCGGAGGCCTCAACATTGGG
CTCAACTTTGGGTACTGCACCCTCTTGGTGATGGAAGATCTGGACGTGAT
CCCTCGGGACGAGGTTCGCTCCGTGAATGTTCAGCTCGTGACCTACAACG
GGAACCAGGGGTCGGCCTTCGGCTCCATCAACATCGGCTTCACTTTCGAT
CACGCTCAACTTTGGGTACTGCACCCTCTTGGTGATGGAAGATCTGGACG
TGATCCCTCGGGACGAGGTTCGCTCCGTGAATGTTCAGCTCGTGACCTAC
AACGGGAACCAGGGGTCGGCCTTCGGCTCCATCAACATCGGCTTCACTTT
CGATCACGGGGGTGAAGTAGAGGCACACGAGCTCGTGACGGCCTACATTC
TGACGGGAAACGCAGGGCAGGGAAATGACAGGGGGTGAAGTAGAGGCACA
CGAGCTCGTGACGGCCTACATTCTGACGGGAAACGCAGGGCAGGGAAATG
ACAGGATCCGGTGGATCCTGGGGTTGATATTTGTGTGCATGACGCTGGCC
ATGATCCGGCACGACACGAAGAAGTGGTATCGAGCCAGGCGTGCCAAGGC
CAGGCGATCCGGTGGATCCTGGGGTTGATATTTGTGTGCATGACGCTGGC
CATGATCCGGCACGACACGAAGAAGTGGTATCGAGCCAGGCGTGCCAAGG
CCAGGCGAAACAAGTGTCACTGCTGCTGCGGCTTTACTTTTTTCACTCTG
ATCATCCTCAACGTTCTGATGTGGGTGGAAACAAGTGTCACTGCTGCTGC
GGCTTTACTTTTTTCACTCTGATCATCCTCAACGTTCTGATGTGGGTGGG
CTGGGCATCTCTGGGGCAGGTCATAACGTCCGATGTGGTTCTTGAAGGCA
CCTCCACCGAAGATGACTTGGTCCTGGGCGCGGGCTGGGCATCTCTGGGG
CAGGTCATAACGTCCGATGTGGTTCTTGAAGGCACCTCCACCGAAGATGA
CTTGGTCCTGGGCGCGCTAATAGGGCAGGTTCTGGCTCTCCAAGAAGCGG
CTCTTTTCTCGTGGGCACTCCACATCATTTTTCTCCTCACAACCTTGGCC
GGACTCTACCGCTGGATATTCCAGGCAAGAGATCGATCCAAGAATACGAT
GAAAAAGGAGTTTCTAATAGGGCAGGTTCTGGCTCTCCAAGAAGCGGCTC
TTTTCTCGTGGGCACTCCACATCATTTTTCTCCTCACAACCTTGGCCGGA
CTCTACCGCTGGATATTCCAGGCAAGAGATCGATCCAAGAATACGATGAA
AAAGGAGTTTATGCTCACGTTCCACAAGCGCATGAGCATCGTCACCGACA
CCCTCAGCAGAGCGAGCACCCACCTCGACCACTTCCTGTTCGTGTTTTTC
CTGATGCTCACGTTCCACAAGCGCATGAGCATCGTCACCGACACCCTCAG
CAGAGCGAGCACCCACCTCGACCACTTCCTGTTCGTGTTTTTCCTGGTAA
TCCTCGCGTTTGCCGCCCTCACATGGCTCCTCGTCGGGTCCAGCACGAAA
GAGTTTTCCACCCTGGAGGACGCGTGGCAGAGCGTGACGCGCATCTCCCT
CGGGGAGTCGGAGAATTTCTACCCGCAGATCCTGGATGCGCAGCCCACGG
TCGGGCCGGTGGTGGTGGTGCTGTACCAGGTCCTGGGCGTGGTGTTGCTG
CTGAACGTGGTGATCGCTATCCTTCTCGAGGTAATCCTCGCGTTTGCCGC
CCTCACATGGCTCCTCGTCGGGTCCAGCACGAAAGAGTTTTCCACCCTGG
AGGACGCGTGGCAGAGCGTGACGCGCATCTCCCTCGGGGAGTCGGAGAAT
TTCTACCCGCAGATCCTGGATGCGCAGCCCACGGTCGGGCCGGTGGTGGT
GGTGCTGTACCAGGTCCTGGGCGTGGTGTTGCTGCTGAACGTGGTGATCG
CTATCCTTCTCGAGGCCTACCGAGGAGTTGTGAGTGGCATGCGTGGCGAG
GACACCATACTCCAGTCGTTCATCGCCTTCGTCGGCATGTCTTGGCCTAC
CGAGGAGTTGTGAGTGGCATGCGTGGCGAGGACACCATACTCCAGTCGTT
CATCGCCTTCGTCGGCATGTCTTGGTGCTCATCGAAAACAAGAATACGCT
GGGCCACCGCCTGCATCCGGTGGCGTCTGGGTGGACGGAGAAACACCTCG
CCTCAGGACAGGCCTAGGCGTCCGTCGCTCAAGATGTTCCTGCAGGGCTC
TACAGGGGTGTGTGGGGTGGATGGGCGGCCTGTGGTGATGGTCCGGAGGC
CGCCAGAGAGCTCGACGGTACTGGGAAGGCAGCTGTCGTTCAACTGCCCG
CGGTACATAACGGTGCTCATCGAAAACAAGAATACGCTGGGCCACCGCCT
GCATCCGGTGGCGTCTGGGTGGACGGAGAAACACCTCGCCTCAGGACAGG
CCTAGGCGTCCGTCGCTCAAGATGTTCCTGCAGGGCTCTACAGGGGTGTG
TGGGGTGGATGGGCGGCCTGTGGTGATGGTCCGGAGGCCGCCAGAGAGCT
CGACGGTACTGGGAAGGCAGCTGTCGTTCAACTGCCCGCGGTACATAACG
GTGACCGAAATGCAGGCACTGATCGAAGCCACTCCGGTCCCGGCTCGCGT
GGCCGACCGGTTGGTGAGGAAGATCGTCCACGATTGGGTTTTCCGAAGCG
ACGAAAGGATCACCGGAGGTGTGTTTCAGTCGCTGTCGTCGTCGGGAGAG
TACGGCAACGGCATCGGCGGCGGCAACGGCGGCGTGACGGCAACGCACCC
CAGGAGAACGTCCAGTACTGACTCGTCACGGCCAATGCTTCGGCGGTGGT
CGTCGTCCACCGCCTCCCGATAGGTGACCGAAATGCAGGCACTGATCGAA
GCCACTCCGGTCCCGGCTCGCGTGGCCGACCGGTTGGTGAGGAAGATCGT
CCACGATTGGGTTTTCCGAAGCGACGAAAGGATCACCGGAGGTGTGTTTC
AGTCGCTGTCGTCGTCGGGAGAGTACGGCAACGGCATCGGCGGCGGCAAC
GGCGGCGTGACGGCAACGCACCCCAGGAGAACGTCCAGTACTGACTCGTC
ACGGCCAATGCTTCGGCGGTGGTCGTCGTCCACCGCCTCCCGATAG
back to top