mRNA_E-siliculosus-1a_F_contig16640.3740.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig16640.3740.1
Unique NamemRNA_E-siliculosus-1a_F_contig16640.3740.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A0D5M7V9_9GAMM (Dual-specificity RNA methyltransferase RlmN n=70 Tax=root TaxID=1 RepID=A0A0D5M7V9_9GAMM)

HSP 1 Score: 482 bits (1241), Expect = 1.270e-169
Identity = 236/242 (97.52%), Postives = 239/242 (98.76%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMID+LGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYL+KCPDNRQ+TIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDL Y ATVRTTRGEDIDAACGQLVGRVKDRTKRS RYIQSVQLDAD
Sbjct:  163 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDRLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLAKCPDNRQVTIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLNYNATVRTTRGEDIDAACGQLVGRVKDRTKRSERYIQSVQLDAD 404
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A2M9TB95_9GAMM (Dual-specificity RNA methyltransferase RlmN n=6 Tax=Halomonas TaxID=2745 RepID=A0A2M9TB95_9GAMM)

HSP 1 Score: 479 bits (1233), Expect = 1.370e-168
Identity = 234/242 (96.69%), Postives = 239/242 (98.76%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPM+DKLGDE+DVSLAISLHASTDELRN LVPINRKYNIRALLDACHRYLSKCPDNRQ+TIEYTLIKD+NDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDL Y ATVRTTRG+DIDAACGQLVGRVKDRTKRSARYIQSVQLDAD
Sbjct:  151 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMMDKLGDEIDVSLAISLHASTDELRNELVPINRKYNIRALLDACHRYLSKCPDNRQVTIEYTLIKDVNDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLEYNATVRTTRGDDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 392
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A7Z7HXR2_9GAMM (Dual-specificity RNA methyltransferase RlmN n=11 Tax=Halomonas TaxID=2745 RepID=A0A7Z7HXR2_9GAMM)

HSP 1 Score: 461 bits (1186), Expect = 1.950e-161
Identity = 219/242 (90.50%), Postives = 236/242 (97.52%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLN+DNVVPAMKLMLDD+GYGLSKRRVTLSTSGVVPM+DKLGDE+DVSLA+SLHA+ DELRN LVP+NRKYNIRAL+DACHRYL+KCP+NR +TIEYTLIKD+NDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYE PSRNQ MRFQQWL+DLGYTA +R+TRG+DIDAACGQLVGRVKDRTKRSARYIQS+QLDAD
Sbjct:  151 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNYDNVVPAMKLMLDDDGYGLSKRRVTLSTSGVVPMLDKLGDELDVSLAVSLHAANDELRNELVPLNRKYNIRALMDACHRYLAKCPENRLVTIEYTLIKDVNDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYETPSRNQTMRFQQWLHDLGYTAPIRSTRGDDIDAACGQLVGRVKDRTKRSARYIQSIQLDAD 392
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A1J0VEM1_9GAMM (Dual-specificity RNA methyltransferase RlmN n=19 Tax=Halomonadaceae TaxID=28256 RepID=A0A1J0VEM1_9GAMM)

HSP 1 Score: 452 bits (1162), Expect = 4.810e-158
Identity = 216/242 (89.26%), Postives = 233/242 (96.28%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLN+D VVPAMKLMLDD+GYGLSKRRVTLSTSGVVPMIDKLGDE+DVSLAISLHA+ DELRN LVP+NRKYNIR LLDACHRYL+KC D R +TIEYT+IKD+NDQQEHAEQLAALL+ELPCKINLIPFNPFP+SGYEKPSRNQVMRFQQWLY+LGYTA +R+TRG+DIDAACGQLVGRVKDRTKR ARYIQS+Q+DAD
Sbjct:  134 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNYDAVVPAMKLMLDDDGYGLSKRRVTLSTSGVVPMIDKLGDELDVSLAISLHAANDELRNELVPLNRKYNIRTLLDACHRYLAKCHDTRMVTIEYTVIKDVNDQQEHAEQLAALLEELPCKINLIPFNPFPHSGYEKPSRNQVMRFQQWLYELGYTAPIRSTRGDDIDAACGQLVGRVKDRTKRHARYIQSIQIDAD 375
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A1I2YVP3_9GAMM (Dual-specificity RNA methyltransferase RlmN n=5 Tax=Halomonadaceae TaxID=28256 RepID=A0A1I2YVP3_9GAMM)

HSP 1 Score: 452 bits (1162), Expect = 4.810e-158
Identity = 217/242 (89.67%), Postives = 231/242 (95.45%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLN+DNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMID+LGDE+DVSLAISLHA+ DELRN LVP+NRKYNIR LLDAC RYL+KC D R ITIEYTLIKD+NDQ+EHAEQLAALLKELPCKINLIPFNPFP+SGYEKPSRNQ MRFQQWLY+LGYTA +RTTRG+DIDAACGQLVGRVKDRT+R  RYIQS+QLDAD
Sbjct:  134 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNYDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDRLGDEIDVSLAISLHAANDELRNELVPLNRKYNIRTLLDACQRYLAKCDDTRMITIEYTLIKDVNDQREHAEQLAALLKELPCKINLIPFNPFPHSGYEKPSRNQTMRFQQWLYELGYTAPIRTTRGDDIDAACGQLVGRVKDRTRRHERYIQSIQLDAD 375
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A317P2I7_9GAMM (Dual-specificity RNA methyltransferase RlmN n=11 Tax=Halomonas TaxID=2745 RepID=A0A317P2I7_9GAMM)

HSP 1 Score: 446 bits (1148), Expect = 6.490e-156
Identity = 209/242 (86.36%), Postives = 233/242 (96.28%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPR+DTANRPVTNVVMMGMGEPLLN+DNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPM+D+LGDE+DVSLAISLHA+ DELR+ LVP+NRKYNIRALLDACHRYL+KC D R +T+EYT+IKD+NDQQ+HA++LA LL+ELPCKINLIPFNPFP+SGYEKPSRNQV+RFQQWLY+LGYTA +RTTRG+DIDAACGQLVGRVKDRTKR  RYIQS+Q+DAD
Sbjct:  134 FQRNLTAAEIIGQVWVAQRSVGPRKDTANRPVTNVVMMGMGEPLLNYDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMLDRLGDELDVSLAISLHAANDELRSELVPLNRKYNIRALLDACHRYLAKCDDTRMVTVEYTVIKDVNDQQQHAQELAELLRELPCKINLIPFNPFPHSGYEKPSRNQVVRFQQWLYELGYTAPIRTTRGDDIDAACGQLVGRVKDRTKRHERYIQSIQIDAD 375
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A556W2P4_HALSX (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A556W2P4_HALSX)

HSP 1 Score: 446 bits (1147), Expect = 1.850e-155
Identity = 213/242 (88.02%), Postives = 230/242 (95.04%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRD+ NRPVTNVVMMGMGEPLLN+DNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGD++DVSLAISLHA+ DELR  LVP+NRKYNIR L+DACHRYLSKC DNR ITIEYTLIKD+NDQQ+HAE+LA LL ELPCKINLIPFNPFP+SGYEKPSRNQ MRFQQWLYDL +TAT+RTTRG+DIDAACGQLVG+VKDRTKR ARYIQS+Q+DAD
Sbjct:  154 FQRNLTAAEIIGQVWVAQRSVGPRRDSGNRPVTNVVMMGMGEPLLNYDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDDIDVSLAISLHAANDELRTELVPLNRKYNIRCLIDACHRYLSKCADNRLITIEYTLIKDVNDQQQHAEELATLLDELPCKINLIPFNPFPHSGYEKPSRNQCMRFQQWLYDLKHTATIRTTRGDDIDAACGQLVGQVKDRTKRHARYIQSIQIDAD 395
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A368U5W9_9GAMM (Dual-specificity RNA methyltransferase RlmN n=2 Tax=Halomonas TaxID=2745 RepID=A0A368U5W9_9GAMM)

HSP 1 Score: 442 bits (1138), Expect = 2.480e-154
Identity = 215/242 (88.84%), Postives = 231/242 (95.45%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRS GP++DTANR VTNVVMMGMGEPL+N+DNV+PAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGD++DVSLAISLHA+TDELR  LVPINRKYNIRALLDACHRYL+KC D R ITIEYTLIKDINDQQEHAEQLAALL+ELP KINLIPFNPFP+SGYEKPSRNQ MRFQQWLYDLG  AT+R+TRG+DIDAACGQLVGRVKDRTKR+ARYIQS+QLDAD
Sbjct:  138 FQRNLTAAEIIGQVWVAQRSSGPQKDTANRAVTNVVMMGMGEPLMNYDNVLPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDDIDVSLAISLHAATDELRTELVPINRKYNIRALLDACHRYLAKCGDARLITIEYTLIKDINDQQEHAEQLAALLEELPSKINLIPFNPFPHSGYEKPSRNQTMRFQQWLYDLGLNATIRSTRGDDIDAACGQLVGRVKDRTKRNARYIQSIQLDAD 379
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A328XPV0_9GAMM (Dual-specificity RNA methyltransferase RlmN n=3 Tax=Halomonas TaxID=2745 RepID=A0A328XPV0_9GAMM)

HSP 1 Score: 442 bits (1137), Expect = 3.170e-154
Identity = 213/242 (88.02%), Postives = 231/242 (95.45%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPL+N+D VVPAMKLMLDDNGYGLSKRRVTLSTSGVVP ID+LGD++DVSLAISLHA+TDELR+ LVP+NRKYNIR+L+DAC RYL+KC D R ITIEYTLIKD+NDQQEHAEQLAALL+ELPCKINLIPFNPFP+SGYEKPSRNQ MRFQQWLY+LGYTA VR+TRG+DIDAACGQLVGRVKDRTKR  RYIQS+QLDAD
Sbjct:  135 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLMNYDAVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPKIDQLGDDIDVSLAISLHAATDELRSELVPLNRKYNIRSLIDACKRYLAKCDDTRIITIEYTLIKDVNDQQEHAEQLAALLEELPCKINLIPFNPFPHSGYEKPSRNQTMRFQQWLYELGYTAPVRSTRGDDIDAACGQLVGRVKDRTKRHERYIQSIQLDAD 376
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Match: A0A7X4FXN0_9GAMM (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Halomonas alkaliantarctica TaxID=232346 RepID=A0A7X4FXN0_9GAMM)

HSP 1 Score: 437 bits (1124), Expect = 4.260e-152
Identity = 208/242 (85.95%), Postives = 230/242 (95.04%), Query Frame = 1 
Query:    1 FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHASTDELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQEHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGYTATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD 726
            FQRNLTAAEIIGQVWVAQRSVGPRRDTA+RPVTNVVMMGMGEPLLN+DNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPM+DKLGD++DVSLAISLHA+ D LRN LVP+NRKYNIR+LLDACHRYL+K  + R +TIEYTLIKD+NDQ++HAE+LAALL ELPCKINLIPFNPFP+SGYEKPSRNQ +RFQ WL++LGYTA +RTTRG+DIDAACGQLVGRVKDRTKR ARYIQS+QLDAD
Sbjct:  145 FQRNLTAAEIIGQVWVAQRSVGPRRDTAHRPVTNVVMMGMGEPLLNYDNVVPAMKLMLDDNGYGLSKRRVTLSTSGVVPMLDKLGDDIDVSLAISLHAANDALRNELVPLNRKYNIRSLLDACHRYLAKGDERRMVTIEYTLIKDVNDQKQHAEELAALLNELPCKINLIPFNPFPHSGYEKPSRNQCVRFQDWLFELGYTAPIRTTRGDDIDAACGQLVGRVKDRTKRHARYIQSIQLDAD 386
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16640.3740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5M7V9_9GAMM1.270e-16997.52Dual-specificity RNA methyltransferase RlmN n=70 T... [more]
A0A2M9TB95_9GAMM1.370e-16896.69Dual-specificity RNA methyltransferase RlmN n=6 Ta... [more]
A0A7Z7HXR2_9GAMM1.950e-16190.50Dual-specificity RNA methyltransferase RlmN n=11 T... [more]
A0A1J0VEM1_9GAMM4.810e-15889.26Dual-specificity RNA methyltransferase RlmN n=19 T... [more]
A0A1I2YVP3_9GAMM4.810e-15889.67Dual-specificity RNA methyltransferase RlmN n=5 Ta... [more]
A0A317P2I7_9GAMM6.490e-15686.36Dual-specificity RNA methyltransferase RlmN n=11 T... [more]
A0A556W2P4_HALSX1.850e-15588.02Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]
A0A368U5W9_9GAMM2.480e-15488.84Dual-specificity RNA methyltransferase RlmN n=2 Ta... [more]
A0A328XPV0_9GAMM3.170e-15488.02Dual-specificity RNA methyltransferase RlmN n=3 Ta... [more]
A0A7X4FXN0_9GAMM4.260e-15285.95Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig16640contigE-siliculosus-1a_F_contig16640:104..832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size729
Model size729
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03009
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.J
EC2.1.1.192
EggNOG OGs1MUYK@1224,1RMUI@1236,1XI0U@135619,COG0820@1,COG0820@2
EggNOG free text desc.Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GOsGO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363
KEGG koko:K06941
Preferred namerlmN
Seed eggNOG ortholog1380358.JADJ01000007_gene3180
Seed ortholog evalue2.8e-134
Seed ortholog score484.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928166.7462153-CDS-E-siliculosus-1a_F_contig16640:103..8321622928166.7462153-CDS-E-siliculosus-1a_F_contig16640:103..832Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16640 104..832 -
1696318832.1455295-CDS-E-siliculosus-1a_F_contig16640:103..8321696318832.1455295-CDS-E-siliculosus-1a_F_contig16640:103..832Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16640 104..832 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig16640.3740.1prot_E-siliculosus-1a_F_contig16640.3740.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig16640 104..832 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig16640.3740.1

>prot_E-siliculosus-1a_F_contig16640.3740.1 ID=prot_E-siliculosus-1a_F_contig16640.3740.1|Name=mRNA_E-siliculosus-1a_F_contig16640.3740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=243bp
FQRNLTAAEIIGQVWVAQRSVGPRRDTANRPVTNVVMMGMGEPLLNFDNV
VPAMKLMLDDNGYGLSKRRVTLSTSGVVPMIDKLGDEMDVSLAISLHAST
DELRNTLVPINRKYNIRALLDACHRYLSKCPDNRQITIEYTLIKDINDQQ
EHAEQLAALLKELPCKINLIPFNPFPNSGYEKPSRNQVMRFQQWLYDLGY
TATVRTTRGEDIDAACGQLVGRVKDRTKRSARYIQSVQLDAD*
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mRNA from alignment at E-siliculosus-1a_F_contig16640:104..832-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig16640.3740.1 ID=mRNA_E-siliculosus-1a_F_contig16640.3740.1|Name=mRNA_E-siliculosus-1a_F_contig16640.3740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=729bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16640:104..832- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTTCAGCGCAACTTAACTGCTGCGGAGATTATCGGCCAAGTATGGGTTGC
TCAGCGTAGCGTCGGCCCCCGTCGCGATACTGCAAATCGTCCCGTGACGA
ATGTTGTCATGATGGGCATGGGTGAACCGCTGCTCAACTTTGACAACGTC
GTTCCGGCCATGAAGCTGATGCTCGACGACAACGGCTACGGTCTGTCTAA
GCGCCGTGTGACATTGTCTACCTCTGGCGTAGTGCCGATGATCGACAAAC
TCGGCGACGAAATGGACGTCAGTTTGGCGATTTCGCTGCATGCATCGACT
GATGAGTTACGCAATACGCTGGTACCTATCAACCGCAAATATAATATTCG
CGCCTTGTTGGATGCCTGCCACCGTTACTTATCCAAATGCCCAGATAATC
GCCAGATCACCATTGAGTACACGTTGATCAAAGATATCAATGATCAGCAA
GAACATGCCGAGCAGCTAGCCGCATTGCTAAAAGAACTGCCGTGTAAGAT
AAATTTGATACCGTTTAACCCATTCCCTAATTCCGGGTATGAGAAGCCAT
CACGTAACCAAGTCATGCGTTTTCAGCAGTGGCTTTACGATTTAGGCTAC
ACAGCAACAGTGAGAACGACTCGCGGTGAGGATATTGATGCCGCCTGTGG
TCAACTGGTTGGACGTGTTAAAGACCGTACCAAACGCAGCGCCCGTTACA
TTCAGTCAGTACAGCTTGATGCAGACTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16640:104..832-

>mRNA_E-siliculosus-1a_F_contig16640.3740.1 ID=mRNA_E-siliculosus-1a_F_contig16640.3740.1|Name=mRNA_E-siliculosus-1a_F_contig16640.3740.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1458bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16640:104..832- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTTCAGCGCAACTTAACTGCTGCGGAGATTATCGGCCAAGTATGGGTTGC
TCAGCGTAGCGTCGGCCCCCGTCGCGATACTGCAAATCGTCCCGTGACGA
ATGTTGTCATGATGGGCATGGGTGAACCGCTGCTCAACTTTGACAACGTC
GTTCCGGCCATGAAGCTGATGCTCGACGACAACGGCTACGGTCTGTCTAA
GCGCCGTGTGACATTGTCTACCTCTGGCGTAGTGCCGATGATCGACAAAC
TCGGCGACGAAATGGACGTCAGTTTGGCGATTTCGCTGCATGCATCGACT
GATGAGTTACGCAATACGCTGGTACCTATCAACCGCAAATATAATATTCG
CGCCTTGTTGGATGCCTGCCACCGTTACTTATCCAAATGCCCAGATAATC
GCCAGATCACCATTGAGTACACGTTGATCAAAGATATCAATGATCAGCAA
GAACATGCCGAGCAGCTAGCCGCATTGCTAAAAGAACTGCCGTGTAAGAT
AAATTTGATACCGTTTAACCCATTCCCTAATTCCGGGTATGAGAAGCCAT
CACGTAACCAAGTCATGCGTTTTCAGCAGTGGCTTTACGATTTAGGCTAC
ACAGCAACAGTGAGAACGACTCGCGGTGAGGATATTGATGCCGCCTGTGG
TCAACTGGTTGGACGTGTTAAAGACCGTACCAAACGCAGCGCCCGTTACA
TTCAGTCAGTACAGCTTGATGCAGACTAATTTCAGCGCAACTTAACTGCT
GCGGAGATTATCGGCCAAGTATGGGTTGCTCAGCGTAGCGTCGGCCCCCG
TCGCGATACTGCAAATCGTCCCGTGACGAATGTTGTCATGATGGGCATGG
GTGAACCGCTGCTCAACTTTGACAACGTCGTTCCGGCCATGAAGCTGATG
CTCGACGACAACGGCTACGGTCTGTCTAAGCGCCGTGTGACATTGTCTAC
CTCTGGCGTAGTGCCGATGATCGACAAACTCGGCGACGAAATGGACGTCA
GTTTGGCGATTTCGCTGCATGCATCGACTGATGAGTTACGCAATACGCTG
GTACCTATCAACCGCAAATATAATATTCGCGCCTTGTTGGATGCCTGCCA
CCGTTACTTATCCAAATGCCCAGATAATCGCCAGATCACCATTGAGTACA
CGTTGATCAAAGATATCAATGATCAGCAAGAACATGCCGAGCAGCTAGCC
GCATTGCTAAAAGAACTGCCGTGTAAGATAAATTTGATACCGTTTAACCC
ATTCCCTAATTCCGGGTATGAGAAGCCATCACGTAACCAAGTCATGCGTT
TTCAGCAGTGGCTTTACGATTTAGGCTACACAGCAACAGTGAGAACGACT
CGCGGTGAGGATATTGATGCCGCCTGTGGTCAACTGGTTGGACGTGTTAA
AGACCGTACCAAACGCAGCGCCCGTTACATTCAGTCAGTACAGCTTGATG
CAGACTAA
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