mRNA_E-siliculosus-1a_F_contig1663.3737.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: D7FHL3_ECTSI (Phosphatidylinositol transfer protein PDR16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL3_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 8.980e-179 Identity = 261/289 (90.31%), Postives = 266/289 (92.04%), Query Frame = 1
Query: 1 MSPGSITDEEAGLVSQLREAHFPSGTESYGLALDDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREALLLANSGTGAS 867
MSPG+ITDEEA L+SQ+REAHFPSGTESYGL LDDAVLVRYLRAREG IEKAA MLTATLEWRREFGFPE VFSKE+DVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTS GLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWK VIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSS+YLAAPLDQDYREALLL NSGTGAS
Sbjct: 1 MSPGAITDEEASLISQVREAHFPSGTESYGLPLDDAVLVRYLRAREGSIEKAAAMLTATLEWRREFGFPE-----------VFSKEMDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSDGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWK------VIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSIYLAAPLDQDYREALLLTNSGTGAS 272
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A835Z4E3_9STRA (Phosphatidylinositol transfer protein PDR16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E3_9STRA) HSP 1 Score: 259 bits (662), Expect = 1.440e-77 Identity = 129/264 (48.86%), Postives = 176/264 (66.67%), Query Frame = 1
Query: 79 ESYGLALDDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEI-DVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREALLLANSGTGAS 867
+ G+ LDD L+RYLRAR+ + KA+ ML TL+WRR+FG ++ S +I + IR+EN+TGK YV G D+ GR L++RP ENT HD +KH+VYQ+ER R LQR + G+GK C++IDY G++LRNAP M+TS +TLNI+Q+HYPE LG ++ ++PP +F GFWK +IYPFID T++KF FV S PAAQ LA NF+MD LEE +GG+ A FDS+VYL+ +D + E+L + AS
Sbjct: 26 DGQGMDLDDQCLLRYLRARQYDLPKASAMLQHTLDWRRDFGV-----------QKILSGDIMETIRRENATGKIYVRGEDTQGRVCLIMRPSQENTHMHDDQMKHLVYQMERARLTLQRKTSGMGKLCMVIDYAGYSLRNAPPMRTSRSTLNIVQDHYPELLGVSYMMNPPYIFTGFWK------IIYPFIDHVTRQKFVFVNSSPHKPAAQANLAANFNMDALEEQLGGRNAVPFDSAVYLSGAIDTCFEESLARHQAAAAAS 272
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A7S2V1P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1P1_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.450e-61 Identity = 102/195 (52.31%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 262 DVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREALLLA 846
DVIR EN+TGK Y GFD GR I+ +RPR ENT +H+GN++H+VY +ER AI++ G+ K C++IDY G+ L NAP MKTS ATL+IL ++YPE LG A+F+ PP +FK FWK V YPFID TK KF F+ + +Q VLAKNFD+ VLE+ +GG+ + FDS+VYLAA + +Y E LL++
Sbjct: 7 DVIRSENATGKIYCRGFDEQGRVIMYMRPRNENTKNHEGNLRHLVYHMERAIAIMKAKGQGVEKICLVIDYEGYNLHNAPPMKTSKATLHILSDYYPERLGVAYFVHPPWIFKAFWK------VFYPFIDPVTKSKFIFLDKPPSHKNSQGVLAKNFDLSVLEQVVGGQAPSDFDSTVYLAAEMHLEYSEVLLVS 195
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A7S1TTS4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTS4_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.880e-54 Identity = 111/257 (43.19%), Postives = 157/257 (61.09%), Query Frame = 1
Query: 97 LDDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSG-GLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREALLLANSGTGA 864
LD A L+RYLRAR+ I+ A ML TL +RRE+ + + F +++ R+EN+TGK Y GFD GR +L ++PR ENT DHDGNI H++Y +ER A +QRT+G G+ K +++DY+ ++L NAP MKTS TL+ILQ+HYPE LG A+ ++PP +F+ W A I PFID T EK FV G A + +L +NFD+D LE +GG+ F+S +Y+ + L +D + L N A
Sbjct: 129 LDTACLLRYLRARDYDIDAAEEMLKDTLNFRREYQVGDIPVK--------FQRQL---RRENATGKTYARGFDKRGRVVLYMKPRYENTNDHDGNIVHLIYNMERACA-MQRTAGTGVEKFALVVDYLDYSLSNAPPMKTSRLTLDILQSHYPERLGVAYLLNPPWIFRAAWAA------ISPFIDPVTYEKIQFVVGDAEAQLG--LLRENFDLDELEVDVGGRNRVPFNSKIYIESELGEDIEKILRKPNEEDAA 365
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A7S3M0V5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0V5_9STRA) HSP 1 Score: 184 bits (466), Expect = 9.050e-49 Identity = 100/255 (39.22%), Postives = 141/255 (55.29%), Query Frame = 1
Query: 73 GTESYGLALDDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREAL 837
G + +G+ ++D RYLRAR + KA ML TL WR+EF FP+ +++++ +I ENSTGK YV G+D G ++ ++P ENT DH GNIKH+VY +ER A + G K ++IDY G+ + P KTS TLNILQNHYPE L A+ + P VF F++ ++ PFID TK+K + + A + L + D +VLE +GG F S+ Y+AAP DY L
Sbjct: 21 GEDGFGMPMNDLTYGRYLRARNFNVVKATKMLRETLVWRKEFDFPK-----------LYAEDKPIIANENSTGKMYVRGYDKEGSALIYMKPVHENTKDHVGNIKHLVYTMERAIACMDAKGQGCSKLSLVIDYDGYNTSHMPPFKTSTETLNILQNHYPERLKCAYTLRAPFVFYAFFR------MVSPFIDPVTKKKICMIKNAEVGKDACQ-LNQEVDREVLETCVGGLDERPFVSADYIAAPFHLDYLSIL 257
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A482SXI4_9ARCH (CRAL-TRIO domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXI4_9ARCH) HSP 1 Score: 172 bits (437), Expect = 5.040e-46 Identity = 99/230 (43.04%), Postives = 129/230 (56.09%), Query Frame = 1
Query: 163 MLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREALLLANS 852
ML TL+WR+EFG LD N D I ENSTGK Y G+D GR IL +RP CENT +HDGN+KH+VY +ER A ++ G K ++IDY G++L +AP MKT+ TL ILQ+HYPE L +A+ + PP VF F+ +I PFID TK+K S + D VLE +GG+ F+SSVYL+AP +DY L A +
Sbjct: 1 MLENTLKWRKEFG-----LDQMHTWN-------DTIALENSTGKTYARGYDKEGRVILYMRPACENTNNHDGNMKHLVYSMERAVACAEKN--GQEKLSLVIDYNGYSLSSAPPMKTARETLTILQDHYPERLHRAYCVHPPFVFWAFFN------MISPFIDPVTKQKIYMATNSELKKPDCRYF-RELDKAVLEVAVGGEDTRPFNSSVYLSAPFHEDYLTTLNKAET 209
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A7S0HB85_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HB85_9EUKA) HSP 1 Score: 173 bits (438), Expect = 2.300e-45 Identity = 107/258 (41.47%), Postives = 137/258 (53.10%), Query Frame = 1
Query: 100 DDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVS-GFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGL-GKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSVYLAAPLDQDYREALLLANSGTGAS 867
D+ V RYL AR ++KA TML TL WR FG + + VIR E+ TGK VS D GRP+LV+ PR ENT+DHDG I ++VY LER G GK +ID+ G++LRNA MKTS ATL+ILQNHYPE L + ++ P +F W A PFID T+ K FV GSA Q L + FD+ LEEG+GG +D + Y A + LA++G GA+
Sbjct: 37 DEDVCARYLVARNNRLDKATTMLKETLRWRHSFGVSK------------LGERHAVIRTESETGKLRVSDSVDRAGRPVLVMTPRAENTSDHDGQILNLVYHLERATGGRGPVDGAADGKLVTVIDFKGWSLRNAAPMKTSRATLSILQNHYPERLHRFLLLNVPTLFTVLWNAMN------PFIDPVTRAKIVFVTGSAEQQ--QAALRECFDLAQLEEGLGGLAPLHWDPAAYFARDAE--------LASAGAGAA 266
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A8J5X440_DIALT (CRAL-TRIO domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X440_DIALT) HSP 1 Score: 173 bits (439), Expect = 4.450e-45 Identity = 108/266 (40.60%), Postives = 151/266 (56.77%), Query Frame = 1
Query: 25 EEAGLVSQLREAHFPSGTESYGLALDDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGF-DSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATK-FDSSVYLAAPLD 816
+EA +S LR A S + LDDA L+RYLRAR ++KAA ML AT+ WR FG ++ +D ++++R E TGK +V+ F D GR +L+LRPR ENT ++GNI ++VY LER A+ +GG K + +D+ G+++ NAP MKTS TL+ILQNHYPE LG+A + P +F G ++A + PFID T+EK +F+ S T E L D V+E +GG FD + Y A D
Sbjct: 51 DEASKISSLR-ALLSSEPPCAHMPLDDACLMRYLRARSMDVDKAAAMLRATIAWRHSFG-ADSIVD-----------RLELVRTEGRTGKCFVAPFVDREGRTVLILRPRMENTRSYEGNIVNLVYTLER--AVASMRAGGPTKLFLFLDFKGYSMFNAPPMKTSQETLHILQNHYPERLGKAVLLDAPWLFSGAFRA------LQPFIDPVTREKISFL--STTHAQHVEQLGAMVDRAVVETDLGGLLTKPHFDEAAYFAPARD 293
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: L1IW21_GUITC (CRAL-TRIO domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IW21_GUITC) HSP 1 Score: 170 bits (430), Expect = 1.250e-44 Identity = 109/253 (43.08%), Postives = 142/253 (56.13%), Query Frame = 1
Query: 28 EAGLVSQLREA------HFPSGTESYGLALDDAVLVRYLRAREGIIEKAATMLTATLEWRREFGFPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTD-HDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGG 765
EA V+ LR H+ S SY D L RYL AR+ + KA MLTATL WR++F V S + +R TGK V G D GRPIL LRP EN+ D HDGN+KH+VY+LER A + G +GK VI+D +++ NAP MKTS ATL+ILQ+HYPE L + I P +F+GF+K +I PFIDK+T K FV G T+ A +EVL+K +++ L + I G
Sbjct: 3 EAAGVASLRSMLDQKAPHYNSNQRSY---CTDYTLKRYLHARKFDVAKAFNMLTATLAWRKDFD--------------VESISMLKVRGNGETGKVVVRGADREGRPILFLRPGQENSKDDHDGNLKHLVYELERAVACMDELRG-VGKMLVILDLQHYSMSNAPPMKTSRATLHILQDHYPERLAKFLIIDAPWLFQGFFK------IISPFIDKETAAKLVFVNGK-TAEAKREVLSKFVELNRLPKSIYG 230
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Match: A0A7S2HGU9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGU9_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.570e-44 Identity = 102/247 (41.30%), Postives = 137/247 (55.47%), Query Frame = 1
Query: 100 DDAVLVRYLRAREGIIEKAATMLTATLEWRREFG-------FPEARLDGATLRNRVFSKEIDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSGGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKARKLYIVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATK--FDSSVYLAAPL 813
D+ +R+LR +G A L ATL+WR+EFG F E +RN V+ EN TGK YV G+D GR +L +RP ENT D G ++H+VY +ER A +R SG L K +IIDY GF +R+AP M T+ TL ILQNHYPE+L +A+ +PP++F+ FW +I+PF+D TK+K F G A + + FDM +EE GG FDS YL +PL
Sbjct: 66 DEHTALRHLRGEKGDAAVATKKLKATLQWRKEFGVEKLVKCFEEG--GDEEMRN--------VMSLENKTGKCYVRGYDKEGRAVLYMRPVLENTKDEIGQMRHLVYNIERAIACTKRKSG-LEKYNIIIDYKGFRIRDAPPMSTTKHTLAILQNHYPESLYRAYLFNPPMIFRTFWT------MIHPFLDPVTKKKILFCHGKA----GLKEMGSKFDMKTVEEFTGGTAGALRGFDSQEYLTSPL 291 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1663.3737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1663.3737.1 >prot_E-siliculosus-1a_F_contig1663.3737.1 ID=prot_E-siliculosus-1a_F_contig1663.3737.1|Name=mRNA_E-siliculosus-1a_F_contig1663.3737.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=290bp MSPGSITDEEAGLVSQLREAHFPSGTESYGLALDDAVLVRYLRAREGIIEback to top mRNA from alignment at E-siliculosus-1a_F_contig1663:4764..11367+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1663.3737.1 ID=mRNA_E-siliculosus-1a_F_contig1663.3737.1|Name=mRNA_E-siliculosus-1a_F_contig1663.3737.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6604bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1663:4764..11367+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1663:4764..11367+ >mRNA_E-siliculosus-1a_F_contig1663.3737.1 ID=mRNA_E-siliculosus-1a_F_contig1663.3737.1|Name=mRNA_E-siliculosus-1a_F_contig1663.3737.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1740bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1663:4764..11367+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |