mRNA_E-siliculosus-1a_F_contig1652.3690.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1652.3690.1
Unique NamemRNA_E-siliculosus-1a_F_contig1652.3690.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A6H5JNP1_9PHAE (ENDO3c domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP1_9PHAE)

HSP 1 Score: 835 bits (2158), Expect = 8.070e-298
Identity = 449/542 (82.84%), Postives = 460/542 (84.87%), Query Frame = 2
Query:   53 PPPLPFSHHETPAARTQLAANDTRSVVGLPSTTQERQRAAAGDT--AGTRMARRTRSGFCTVKKEKLDDELFGTDTPPSTGTWVVKEEPKSSIRRQTPNANHGGSTLSATSAGGSGDPEPSETSRYFDSSPPVRGRKRKAAASVTGPAXXXXXXXXXXXXXXGAGGGTGKASKLSATPPSATTGVCAVGTQRRSSGRLNAVKKEELTSALELPEPSPSDAKRRTKGDASTNVDCKPRRRRTAVATKGEVCVQASEXXXXXXXXXXXXXXXIEKGEGVRERAVPPRLAEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSWVKKTGPGSPKALAELTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFRMKLEDN 1672
            PP LPF HH+ P      A +D  SVVG+P TTQ+R++AAAG T   GTRMARRTR GFC VKKE+LDDELFGTDTPPSTGT  +K E KSSIRRQTPN N GGS   ATSAGGSG  EP ETSRYFDSS PVRGRKRK AASVTGPA              G G GTGKASKLSAT PSATTG CAVG +RRSS  LNAVKKEELTSALELPEPSPSDAKRRTKGD ST  DCKP RRR AVA KGEVCVQASE               IEK   VRERA+PPRLAEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMA EDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRW LTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHD SACPICSWVKKTGPGSPKALAELTCLNDYLASPTPTKKSSKNAIVYSER LEMEQFRMKLED+
Sbjct:   26 PPLLPFKHHQIPRCACIGAHSDRCSVVGVPITTQKRRQAAAGGTLEVGTRMARRTRFGFCAVKKEELDDELFGTDTPPSTGTCAIKGELKSSIRRQTPNTNRGGSKTPATSAGGSGR-EPPETSRYFDSSLPVRGRKRKVAASVTGPAEGSCTTGSKSRRHRGTGDGTGKASKLSATSPSATTGFCAVGARRRSSRTLNAVKKEELTSALELPEPSPSDAKRRTKGDTSTIGDCKPLRRRAAVAAKGEVCVQASEEGKGKKKARTKAKANIEKRGEVRERAIPPRLAEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAQEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWELTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKALAELTCLNDYLASPTPTKKSSKNAIVYSERMLEMEQFRMKLEDS 566          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: D8LEA3_ECTSI (Putative endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA3_ECTSI)

HSP 1 Score: 795 bits (2053), Expect = 1.030e-282
Identity = 432/551 (78.40%), Postives = 441/551 (80.04%), Query Frame = 2
Query:   20 NIASRALTFPSPPPLPFSHHETPAARTQLAANDTRSVVGLPSTTQERQRAAAGDTAGTRMARRTRSGFCTVKKEKLDDELFGTDTPPSTGTWVVKEEPKSSIRRQTPNANHGGSTLSATSAGGSGDPEPSETSRYFDSSPPVRGRKRKAAASVTGPAXXXXXXXXXXXXXXGAGGGTGKASKLSATPPSATTGVCAVGTQRRSSGRLNAVKKEELTSALELPEPSPSDAKRRTKGDASTNVDCKPRRRRTAVATKGEVCVQASEXXXXXXXXXXXXXXXIEKGEGVRERAVPPRLAEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSWVKKTGPGSPKALAELTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFRMKLEDN 1672
            ++ S +   PSP P P +H               RSVVGLPSTTQERQRAA GDT                                        +EPKSSIRRQTPNAN GGST  ATSAGGSGDPEPSETS YFDSSPPVRGRKRKAAASV GPA              GAG  TGK  KLSAT PSATTGVCA GTQRRSSGRLNAVKKEELTSALELPEP PSDAKRRTKGDASTN DCKPRRRR AVATKGEVC QASE               IEKGEGVRERAVPPRLAEKAALIIQIMDKLYPDPPIPINH+DSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQ+ IRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHD SACPICSWVKKTGPGSPKALA+LTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFRMKLED+
Sbjct:   16 SLPSTSAVQPSPDPPPRAH------------THKRSVVGLPSTTQERQRAAPGDT----------------------------------------DEPKSSIRRQTPNANQGGSTTFATSAGGSGDPEPSETSHYFDSSPPVRGRKRKAAASVAGPAGGSCTTGGKSRRHRGAGDATGKYPKLSATSPSATTGVCAAGTQRRSSGRLNAVKKEELTSALELPEPPPSDAKRRTKGDASTNGDCKPRRRRAAVATKGEVCAQASEEGKGKKKARTKAKTKIEKGEGVRERAVPPRLAEKAALIIQIMDKLYPDPPIPINHMDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQRTIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGSPKALAQLTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFRMKLEDS 514          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A835ZEQ0_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ0_9STRA)

HSP 1 Score: 274 bits (701), Expect = 5.820e-83
Identity = 128/201 (63.68%), Postives = 159/201 (79.10%), Query Frame = 2
Query:  929 QIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSWVKKTGPGS 1531
            Q++D+LYP+PP+P+NH D FTLLC VLLSAQTTD +VN VT ELF  AP P++L+ M+H D+  IIR+VGLAPTKA+HLIA +QQ+ +RF G VP+T E LQ+LPGVGRKTA+VVM  AF  PAFPVDTHIHRLALRW L+++E N  +VE DL A++P  ++ +LHLQFIYFGRE+CQAR H  S CP+CSW     P S
Sbjct:    3 QVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTS 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A356FBE6_9BACT (Endonuclease III n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FBE6_9BACT)

HSP 1 Score: 265 bits (678), Expect = 2.780e-80
Identity = 129/200 (64.50%), Postives = 154/200 (77.00%), Query Frame = 2
Query:  908 EKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            EKA  I  I+D+LY DPPIP++H D +TLL  VLLSAQTTD +VNLVT ELFR AP P+ + K+  E++  IIR+ GLAP KA+++ ALSQ +LD   G+VP   E L++LPGVG KTA+VVM+QAF  PAFPVDTHIHRLA RWGL+ N KN  K E DL AVFPR+SWAKLHLQ IYFGREHC A  HD++ CPICSW
Sbjct:    5 EKAEKIHAILDELYEDPPIPLDHKDPYTLLVSVLLSAQTTDKRVNLVTPELFRRAPTPRKMVKLTVEEILAIIRTCGLAPGKARNIHALSQILLDEHGGRVPADMEKLEALPGVGHKTASVVMIQAFEQPAFPVDTHIHRLAARWGLS-NGKNVEKTERDLKAVFPRESWAKLHLQIIYFGREHCPALFHDLTECPICSW 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A3A5WA12_9ARCH (Endonuclease III n=2 Tax=Archaea TaxID=2157 RepID=A0A3A5WA12_9ARCH)

HSP 1 Score: 261 bits (666), Expect = 1.220e-78
Identity = 118/201 (58.71%), Postives = 160/201 (79.60%), Query Frame = 2
Query:  905 AEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            +EKA++I++++++ YP+ P+P++H + F LL  VL+SAQTTD +VN VT ELFR  P+ QS+SK++ E +Q IIR VGLAPTKA+++  LS+ ++D ++G++P TFEGL+ LPGVG KTA VVM QAF  PAFP+DTHIHRLA RWGL+ N  N  K E+DL A+FP++SW KLHLQ I+FGRE+C AR HD++ CPICSW
Sbjct:    4 SEKASIILEMLEEYYPETPVPLDHENPFQLLVAVLMSAQTTDKKVNQVTPELFRQGPDAQSMSKLSPETIQGIIREVGLAPTKARNISKLSKILVDSYEGQIPNTFEGLEGLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLS-NGTNVVKTEKDLKAIFPKESWNKLHLQIIFFGREYCPARNHDLTKCPICSW 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A2E6NQE6_9BACT (Endonuclease III n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6NQE6_9BACT)

HSP 1 Score: 256 bits (654), Expect = 9.050e-77
Identity = 125/200 (62.50%), Postives = 153/200 (76.50%), Query Frame = 2
Query:  908 EKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            EKA  I  I+D+LY +PPIP+ H D +TLL  VLLSAQTTD +VN+VT ELFR AP P+ + K+  +++  IIR+ GLAP KA+++ ALS+ +L+   GKVP   E L++LPGVG KTA+VVM+QAF+ PAFPVDTHIHRLA RWGL+ N KN  K E DL AVFP  SWAKLHLQ IYFGREHC AR HD++ CPICSW
Sbjct:    5 EKAVKIHAILDELYKNPPIPLVHKDPYTLLVSVLLSAQTTDKRVNMVTPELFRRAPTPRKMVKLDVDEILGIIRTCGLAPGKARNIHALSRILLEEHGGKVPADMEKLEALPGVGHKTASVVMIQAFDRPAFPVDTHIHRLAARWGLS-NGKNVEKTERDLKAVFPERSWAKLHLQIIYFGREHCPARGHDLAQCPICSW 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A2E6C705_9EURY (Endonuclease III n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6C705_9EURY)

HSP 1 Score: 254 bits (648), Expect = 5.220e-76
Identity = 117/201 (58.21%), Postives = 154/201 (76.62%), Query Frame = 2
Query:  905 AEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            +EKA  I+Q++ + YP+ P+P+ H   F LL  VL+SAQTTD +VN VT ELFR  P+ + ++K+  E +Q+IIR VGLAPTKAK++  L+Q +++ +D ++P TFEGL+SLPGVG KTA VVM QAF  PAFP+DTHIHRLA RWGL+ N  N  K E+DL A+FP++SW KLHLQ I+FGRE+C AR HD++ CPICSW
Sbjct:    4 SEKAPRILQMLXEFYPETPVPLXHETPFQLLIAVLMSAQTTDKKVNEVTPELFRRGPDAEXMAKLTPETIQKIIREVGLAPTKAKNISKLAQILVESYDSEIPNTFEGLESLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLS-NGTNVVKTEKDLKAIFPKESWNKLHLQIIFFGREYCPARNHDLTKCPICSW 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A6N2D4Y0_9DELT (Endonuclease III n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D4Y0_9DELT)

HSP 1 Score: 254 bits (648), Expect = 6.810e-76
Identity = 120/201 (59.70%), Postives = 152/201 (75.62%), Query Frame = 2
Query:  905 AEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            AEKA  I   +++LYP+ PIP++H+D FTLL  VLLSAQTTD +VN VT  LF VAP P+ +  +  ED++++IR +GLAP KAK L  L +Q+++   G+VP +FE L++LPGVG KTA+VVM QAF  PAFPVDTHIHRLA RWGL+   ++  K E DL  VFPR+SW +LHLQ I+FGREHC AR HD+SACPICSW
Sbjct:    4 AEKADRIRMQLEELYPETPIPLDHVDPFTLLVAVLLSAQTTDRKVNEVTPRLFAVAPTPERMMALEMEDIRELIRELGLAPQKAKALYGLCRQLVETHGGEVPVSFEALEALPGVGHKTASVVMAQAFGVPAFPVDTHIHRLAARWGLSDG-RSVEKTERDLKRVFPRESWNRLHLQIIFFGREHCPARYHDLSACPICSW 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A2E4F9J2_9DELT (Endonuclease III n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E4F9J2_9DELT)

HSP 1 Score: 253 bits (647), Expect = 7.060e-76
Identity = 122/200 (61.00%), Postives = 150/200 (75.00%), Query Frame = 2
Query:  908 EKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            EKA  I  ++D+LYP+PPIP++H DSFTLL  VLLSAQTTD +VN VT  LF   P PQ ++ ++ + ++  IR VGLAPTKAK++ AL+Q+++D FD +VP     L+SLPGVG KTA+VVM QAF  PAFPVDTHIHRLA RWGL+ N KN    E DL  VFPRD+W + HLQ IYFGRE+C AR HD+S CPICSW
Sbjct:    5 EKADRIGVMLDELYPEPPIPLDHRDSFTLLIAVLLSAQTTDKKVNEVTPALFEAGPTPQRMAALSVDVIRDHIRQVGLAPTKAKNIQALAQRLIDDFDAEVPADLAALESLPGVGHKTASVVMCQAFGVPAFPVDTHIHRLAARWGLS-NGKNVDTTERDLKRVFPRDTWNRRHLQIIYFGREYCPARHHDLSTCPICSW 203          
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Match: A0A2E8RYW3_9DELT (Endonuclease III n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E8RYW3_9DELT)

HSP 1 Score: 253 bits (647), Expect = 9.220e-76
Identity = 118/201 (58.71%), Postives = 151/201 (75.12%), Query Frame = 2
Query:  905 AEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSW 1507
            +EKA  I++I+++L+P  PIP+ H D FTLL  V+LSAQTTD +VN VT  LF+ AP+P+ ++K+  E +Q++IR +GLAP KA+ L  LSQ ++D F+G VP  FE LQ LPGVGRKTA V+M QAF  PAFPVDTHIHRLA RWGL++  K A   E+DL  +FPR+SW KLHLQ I+FGR HC AR H++  CPICSW
Sbjct:    4 SEKAIRIMEILEELFPTTPIPLTHTDPFTLLVAVVLSAQTTDKKVNQVTPSLFKQAPDPKRMAKLPVETIQELIREIGLAPQKARALKGLSQMLIDDFEGCVPADFEALQRLPGVGRKTANVIMAQAFGQPAFPVDTHIHRLAARWGLSRG-KTADHTEQDLRKIFPRESWNKLHLQIIFFGRSHCPARYHELEDCPICSW 203          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1652.3690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNP1_9PHAE8.070e-29882.84ENDO3c domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LEA3_ECTSI1.030e-28278.40Putative endonuclease n=1 Tax=Ectocarpus siliculos... [more]
A0A835ZEQ0_9STRA5.820e-8363.68DNA glycosylase (Fragment) n=1 Tax=Tribonema minus... [more]
A0A356FBE6_9BACT2.780e-8064.50Endonuclease III n=1 Tax=Planctomycetes bacterium ... [more]
A0A3A5WA12_9ARCH1.220e-7858.71Endonuclease III n=2 Tax=Archaea TaxID=2157 RepID=... [more]
A0A2E6NQE6_9BACT9.050e-7762.50Endonuclease III n=1 Tax=Planctomycetes bacterium ... [more]
A0A2E6C705_9EURY5.220e-7658.21Endonuclease III n=1 Tax=Euryarchaeota archaeon Ta... [more]
A0A6N2D4Y0_9DELT6.810e-7659.70Endonuclease III n=1 Tax=Deltaproteobacteria bacte... [more]
A0A2E4F9J2_9DELT7.060e-7661.00Endonuclease III n=1 Tax=Deltaproteobacteria bacte... [more]
A0A2E8RYW3_9DELT9.220e-7658.71Endonuclease III n=1 Tax=Myxococcales bacterium Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1652contigE-siliculosus-1a_F_contig1652:508..6554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1479
Model size2290
Exons10
Ec32 orthologEc-00_001490.1
Ec32 ortholog descriptionDNA glycosylase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.L
EC4.2.99.18
EggNOG OGsCOG0177@1,KOG1921@2759
EggNOG free text desc.oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
KEGG Pathwayko03410,map03410
KEGG koko:K10773
Preferred nameNTH1
Seed eggNOG ortholog2880.D8LEA3
Seed ortholog evalue7.6e-224
Seed ortholog score783.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1652.3690.1prot_E-siliculosus-1a_F_contig1652.3690.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1652 1328..5939 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928157.599091-UTR-E-siliculosus-1a_F_contig1652:507..6921622928157.599091-UTR-E-siliculosus-1a_F_contig1652:507..692Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1652 508..692 +
1696318828.0719726-UTR-E-siliculosus-1a_F_contig1652:507..6921696318828.0719726-UTR-E-siliculosus-1a_F_contig1652:507..692Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1652 508..692 +
1622928157.612107-UTR-E-siliculosus-1a_F_contig1652:1316..13271622928157.612107-UTR-E-siliculosus-1a_F_contig1652:1316..1327Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1652 1317..1327 +
1696318828.0827491-UTR-E-siliculosus-1a_F_contig1652:1316..13271696318828.0827491-UTR-E-siliculosus-1a_F_contig1652:1316..1327Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1652 1317..1327 +
1622928157.7207675-UTR-E-siliculosus-1a_F_contig1652:5939..65541622928157.7207675-UTR-E-siliculosus-1a_F_contig1652:5939..6554Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1652 5940..6554 +
1696318828.2180808-UTR-E-siliculosus-1a_F_contig1652:5939..65541696318828.2180808-UTR-E-siliculosus-1a_F_contig1652:5939..6554Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1652 5940..6554 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928157.6219125-CDS-E-siliculosus-1a_F_contig1652:1327..21101622928157.6219125-CDS-E-siliculosus-1a_F_contig1652:1327..2110Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 1328..2110 +
1696318828.0949152-CDS-E-siliculosus-1a_F_contig1652:1327..21101696318828.0949152-CDS-E-siliculosus-1a_F_contig1652:1327..2110Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 1328..2110 +
1622928157.6322203-CDS-E-siliculosus-1a_F_contig1652:2436..24931622928157.6322203-CDS-E-siliculosus-1a_F_contig1652:2436..2493Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 2437..2493 +
1696318828.1126838-CDS-E-siliculosus-1a_F_contig1652:2436..24931696318828.1126838-CDS-E-siliculosus-1a_F_contig1652:2436..2493Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 2437..2493 +
1622928157.641516-CDS-E-siliculosus-1a_F_contig1652:3038..31301622928157.641516-CDS-E-siliculosus-1a_F_contig1652:3038..3130Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 3039..3130 +
1696318828.1229944-CDS-E-siliculosus-1a_F_contig1652:3038..31301696318828.1229944-CDS-E-siliculosus-1a_F_contig1652:3038..3130Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 3039..3130 +
1622928157.6510606-CDS-E-siliculosus-1a_F_contig1652:3381..35031622928157.6510606-CDS-E-siliculosus-1a_F_contig1652:3381..3503Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 3382..3503 +
1696318828.135551-CDS-E-siliculosus-1a_F_contig1652:3381..35031696318828.135551-CDS-E-siliculosus-1a_F_contig1652:3381..3503Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 3382..3503 +
1622928157.6620498-CDS-E-siliculosus-1a_F_contig1652:3931..40551622928157.6620498-CDS-E-siliculosus-1a_F_contig1652:3931..4055Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 3932..4055 +
1696318828.146673-CDS-E-siliculosus-1a_F_contig1652:3931..40551696318828.146673-CDS-E-siliculosus-1a_F_contig1652:3931..4055Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 3932..4055 +
1622928157.6741679-CDS-E-siliculosus-1a_F_contig1652:4353..44441622928157.6741679-CDS-E-siliculosus-1a_F_contig1652:4353..4444Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 4354..4444 +
1696318828.1563072-CDS-E-siliculosus-1a_F_contig1652:4353..44441696318828.1563072-CDS-E-siliculosus-1a_F_contig1652:4353..4444Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 4354..4444 +
1622928157.6864276-CDS-E-siliculosus-1a_F_contig1652:4814..48651622928157.6864276-CDS-E-siliculosus-1a_F_contig1652:4814..4865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 4815..4865 +
1696318828.168761-CDS-E-siliculosus-1a_F_contig1652:4814..48651696318828.168761-CDS-E-siliculosus-1a_F_contig1652:4814..4865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 4815..4865 +
1622928157.6970391-CDS-E-siliculosus-1a_F_contig1652:5136..52681622928157.6970391-CDS-E-siliculosus-1a_F_contig1652:5136..5268Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 5137..5268 +
1696318828.1869955-CDS-E-siliculosus-1a_F_contig1652:5136..52681696318828.1869955-CDS-E-siliculosus-1a_F_contig1652:5136..5268Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 5137..5268 +
1622928157.7110846-CDS-E-siliculosus-1a_F_contig1652:5912..59391622928157.7110846-CDS-E-siliculosus-1a_F_contig1652:5912..5939Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 5913..5939 +
1696318828.2037787-CDS-E-siliculosus-1a_F_contig1652:5912..59391696318828.2037787-CDS-E-siliculosus-1a_F_contig1652:5912..5939Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1652 5913..5939 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1652.3690.1

>prot_E-siliculosus-1a_F_contig1652.3690.1 ID=prot_E-siliculosus-1a_F_contig1652.3690.1|Name=mRNA_E-siliculosus-1a_F_contig1652.3690.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=493bp
MARRTRSGFCTVKKEKLDDELFGTDTPPSTGTWVVKEEPKSSIRRQTPNA
NHGGSTLSATSAGGSGDPEPSETSRYFDSSPPVRGRKRKAAASVTGPAGG
SCTTGGKSRRHRGAGGGTGKASKLSATPPSATTGVCAVGTQRRSSGRLNA
VKKEELTSALELPEPSPSDAKRRTKGDASTNVDCKPRRRRTAVATKGEVC
VQASEEGKGKMKARTKAKAKIEKGEGVRERAVPPRLAEKAALIIQIMDKL
YPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSK
MAHEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPG
VGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMA
VFPRDSWAKLHLQFIYFGREHCQARVHDVSACPICSWVKKTGPGSPKALA
ELTCLNDYLASPTPTKKSSKNAIVYSERKLEMEQFRMKLEDN*
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mRNA from alignment at E-siliculosus-1a_F_contig1652:508..6554+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1652.3690.1 ID=mRNA_E-siliculosus-1a_F_contig1652.3690.1|Name=mRNA_E-siliculosus-1a_F_contig1652.3690.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6047bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1652:508..6554+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTTGCCGGGGCTCCGCAACATCGCGAGCAGAGCGCTTACTTTTCCCT CCCCTCCACCTCTACCGTTCAGCCATCACGAGACCCCCGCCGCGCGCACA CAACTTGCCGCAAACGACACGCGCAGCGTGGTTGGTTTACCCAGCACCAC ACAAGAACGCCAACGGGCAGCAGCAGGAGACACAGGTGAGGTTGGGGTGG TGGAAGCTATCGTAAATAAGGCTGTTGCTGGACTATGACTCAATCAATGC TGCGCTCCTGGCGTGGTTCTGAGGCACTTGTTGCCAGATGGCCCGACACA TGATTCGTCCAATTTAACCCCTGTACATCAGTGACCACCATGCCGCACCA GACAGACACGCCCGCCGCCGAGAGGACTATTAAAAATTGTGTATGTGGAG TACAGCAGTAGACTATTGTATCTGCACAGGTGTGAAAACATCGGATGGGC AAAGGGACGAATTTTACGCGGGATACATGCAGTAGAAATCTCGAACAACA GCTGTGTGGTGCCGTCGTTCGCCCGGCGTTTGTTCGCCAAGACCTTGAGG CACGTGTGAGGTAGGGTGTGCTGCTGGCGAGACCACTGATTTCCAACGAA AAAAGACACTTAGTGTAACGCGGAGGAAGAAAAGGCTTTTATATACGCCC TCTGCGAATCGTCGTGCACCTGACCACAAGAGGCTTTGGACCTACTGCTG TGCGCGCGGACCGCGTTTGATATCGCTGGGTTTCGTTGAGACACTATTTT ATGCGCATGTATGGCATAGGAGAACGCTTCTTACTCGTCCACGCATCGAC CTACGCAAGCAGGCACACGTATGGCTCGGCGCACGCGATCCGGGTTCTGT ACTGTGAAGAAGGAAAAGCTCGATGACGAGCTATTCGGCACTGACACCCC GCCATCGACGGGAACATGGGTAGTCAAAGAGGAGCCCAAGTCATCCATCA GGCGGCAAACGCCGAACGCAAATCACGGCGGCTCGACGTTATCCGCAACC TCCGCCGGAGGCAGCGGTGATCCTGAGCCCTCCGAGACGTCTCGCTATTT TGATTCTTCCCCCCCTGTGAGAGGGAGGAAACGGAAGGCGGCAGCGAGTG TCACCGGCCCCGCCGGAGGTAGCTGTACGACGGGCGGCAAGAGCAGGCGC CATCGAGGTGCTGGCGGTGGCACCGGAAAAGCTTCGAAGCTGTCTGCCAC ACCCCCAAGCGCGACAACTGGCGTTTGCGCGGTCGGTACCCAGCGCCGGA GTAGCGGCAGACTCAACGCCGTGAAGAAAGAGGAGCTGACAAGCGCGCTC GAACTCCCAGAGCCATCTCCGTCAGATGCCAAGAGGAGGACGAAGGGCGA TGCCTCCACGAACGTGGATTGCAAACCCCGGAGGAGGAGGACTGCGGTCG CTACCAAGGGCGAAGTCTGCGTGCAGGCGTCCGAGGAGGGCAAGGGGAAG ATGAAGGCCCGGACGAAGGCAAAGGCCAAGATCGAAAAGGGGGAAGGGGT TCGGGAAAGGGCTGTTCCGCCGCGCTTGGCGGAGAAGGCGGCGCTGATAA TCCAGATTATGGACAAGCTTTACCCGGACCCGCCTATACCGATCAACCAC CTAGTGAGTAGCACCACCTTCTAGGTCCCGCGGCAAAGTGGGACTGTCGA GATGCACGCAGGGTGCCTTGATCTAGAGCAGCGTGGCAGGCGCGTTCGAG AACTCGTAAACGGCCCTTGTTGAACGGCAGGCTTTGTGTTGTTGGGGAAG GCTGACTCACGTCGGACATCAAGGAAGTTTGAGCAATGATGTGGTAGCCG AGATGTACTCTAAGCGAGAAAATGATGTGCTGTGTGCCCCACTCCTCACC GTATTTTTGCTTAACACTTACAAGTCCTCTGCCATGCTCACCCGTTGTCG TTTCGATCGTTCTCCTTTTCCGAGGGCAGGACAGCTTCACGTTGCTTTGC GGGGTGCTACTCTCTGCTCAGACCACCGATGCTCAGGTACGCCGCCTTTT CGGCTCTTTAGCCTCTTGGGAAGCATGTTCATATATGTCCCTATCCCTAA CCATTACTCTACCCTAACCCTCGCCGTAAACCTTAAGGGTAGTCAAGTAC CTATCCAGCAGATTATCCTCAGCACTCAGTGTAAACACTTGAACGCATTC CTTCGGTTGAGGTATTTCTCGAACGTGCGTTGTTCATGTGTTTGTATGAA GTTTGTGTTCTAAGAAGCACTCGAGACTATTTTATTTCTCTTTCGTTTTG CGGATAATTTGACTCGTACCGAAGAGTCACTTGTTCGTGGCGGTGAGCAG AGTGGCTTCCGTGTGGGCTTTGAATGTCACCACGGGTCATACGGCAGGCC GTCTATGTTGGGCCTACGGTGCGCCAGATGCCTTTCTATATATACAAGAC GTTCGGGTACGCGAACGTTTCACCCCGCTCGCACTCTTCTAGGGAAGTGG GCTTTTGCACTTGTTTTTGGCAATGCGATGTATTATGGATTCGTGCTTGA CATTGCTGCGATCACACACCGCACCGTTTAGGTTAACCTGGTGACGCAGG AGTTATTCAGGGTGGCGCCCAATCCGCAGTCCTTGTCCAAGATGGCACAT GAGGATCTGCAACAGATCATCAGGTGCGGAAAGCGCTTTGACATTTCATT TGAGCGAAACCGATAGACACGACGAGCGACGGTCTTTCGATGGTATGGTA ACAGAAATACCGGGTCAGATGGCACGGGCAAATATTTTCAAGCTTTCGAT TGGATCTCGCTATGTTAATATTGCGGCAAATTCACACAGCACAGCACGTT GCCGTGTTGTTGGAACCACAGAGTTTACTGAGTGTTTTGATTTCGTTCCT GTTGCGCGGCCGCTTGACTGCCAGATCCGTTGGACTTGCACCCACCAAGG CGAAGCATCTAATCGCGCTGTCGCAGCAGATTCTAGACCGCTTCGACGGC AAGGTTCCCCAGACGTTCGAGGGCCTCCAGAGCCTGCCCGGCGTCGGTAC GTGGTGTTCCAGGGTTTGAGACAGGTTGTCCCTGTAAGTATTGTTCCGAA TATCGGGTGTTTTGGTTTTTGGTAGACCGTTCATCGAAGCTTGAAGTGTG CGGACACTAATTTGTAGGCTTTCGTGGTTGTTGTTTTGACAGCTGCTCCT ACTACTCCTGCTACCCCTGGACGTTCTGCACGTTACAGCCCAAGCTCATG TCTTAGCTGGTAGAGAATCGATGGATTGGCACCTGTTGGCAATGCGATTC ATTCGCGTGTGCTTCTTCCTTGAGCGCTTTCGTGGAGTGATTCAATTGGC TAAGTACGCCACTTACGATCAAAATAATTTTCCCCACACTCAAAGCTCTC AAGCTTTGTGCCGTTGAACGCTCATCAGTGACATCTCCGTGATGAATCCG CCGTAAACGTAAATGCTGACCCAGGGCGCAAAACTGCTGCGGTGGTGATG GTCCAGGCCTTCAACACCCCTGCCTTTCCTGTGGACACACATATTCACCG ATTGGCCCTTCGGTGGGGTCTGACCAAGAATGAAAAGAACGCCAGCAAGT GAGAGGCGTGGTCGACCACCAAACGGCGTACTTGGCTGTTGGTGCATCTC GTTGTTGAGGGGTTGATTGTTGTTCAGATTGATGTAGGCCGTTATCAAAC GGCGTGGTTGCTGTTGGTGCAACTCGTTGTTGAGGGATGGTTTCATGGTT GACTGTTGTTCAGCTTGATGAATTTACCCTCGCGCCAACTCGTTTAGTGT TCACCCGGCTCTCAATGCGGTTGTGAAACCAGCTACCCCATTCCCGTGCT TTCCCGTCCCACCGCATATCCGTACCTAACCCCGCGCTCTCTGAAGGGTG GAAGAGGACCTTATGGCCGTATTCCCACGAGACTCGTGGGCCAAGTTGCA CCTTCAGTTCATCTACTTCGGCCGTGAGCACTGCCAGGTGACGTGCAAGG GAACAGCATGGCGGGGCGAACAGTTTATTGCGTCAGTCTGGAGCGCGCGC GTGTAAAGATGACTGTGCAGTGTTCGCTTCATCAACTGTTCCCATTTATC CCATAAAAAAAACAACGGCTGGGTCAATACGCCGGCTCTTCCGCATGCTG TACGTATGAGAGGGCGTTGGTCTAGGCCTGACGGAGAGCGATACCTTTAC CAATTCTCCTCACAGAGTACCGTAACGATGCACATGCACGGTGTTTGACG TCGAAGGTGTGAAATATCCCGTCCCCCGCTTCATCCTACGAGGCTCCACG AGATAATTCGCTGTCCTTTGGCCCGTTTGTGACTCTCTTTTTGTCCGGAA CGTTCAGGCTCGCGTGCACGACGTTTCGGCTTGCCCCATCTGCTCTTGGG TAAAGAAGGTACGGATCTCTGGGGCCGTGATGTTGGCCATACTGTCGTGG TTATGTGGCTGGCGCCTCGTCGTCTCTTTTTCATTCCACGGGCTGAATCC AACAGTCCCGCCGTCCAGGGCAGGGATCTGCTCTGTGCTGTATGCTTTGC TGGCCCCTTGAGCGTCTTGGTTTCGGTAGGTTGCGAGATTGCGCGCATGT TTGGCTACCCTAAGGGCAACACTCGTACATTGTGGTCGATAACGCGGCGT GTGTTTTGCGTCTTGCTGTGCTTTCGCAGACTGGACCTGGATCCCCAAAA GCGTTGGCGGAGCTGACCTGCCTGAACGATTACCTGGCATCCCCTACCCC CACCAAGAAGTCCAGCAAGAACGCCATCGTCTACAGCGAGAGGAAGCTAG AGATGGAACAGGTAACCTACTGCTGCGTGTGCTCGTTGTATGTGGCATCT CTTTTTCCTAGTTTGGGCGCTGATCGAAAGGGAGATGTCGCCTTTCACCT ACCAGGAAGTTGGTGAAGAACGGTTTCATTCGGGCGTAGTCTTTCGCGAT GCAATCTCTATGGTGATCGTTTCGAGGCTGGTTGTGACTCCCTTGCAATT CACTGCTTCAGTCCAGCAAAGGTTGTCAAGAGTCGAACCATAGGACCCAG AGTGTACGTTTTTTCGCTGGCGACAGATTTTAGGTGTCCTCGTTGTTGTT GAACAGCTTCTCGTGTTCGTCTGCATCATGCGCGTCAGCCGCGCAGACGG CTGCCCGTCGGTGCTACCAAACTCTCCTCCCCCCACATTATGACGTCGAT GATTATTCACGCCACCTGGAAATTGTGCATGATAGAGTCGAAGCCGCGGA CCCGGCCCCCTGTCCGGCTTGGTTTTCCTGCACAACGGAAGGAATTCATT GTCCTTAGCTTTGTGAGGGCGGCAGAACGTGTATGCAAAATTTCCCGAAC GGTCAATCCGCAGTCGTGTTGTGGAGGTGATTTGTGAAAATTTGTTTACT GAAGCATCAATGCTTGTGTCGTCTCTCGCGATCGGTGGTTTGTTCGGCCG TGCAGTTCAGGATGAAACTGGAAGACAACTGAGTTGGCACCGACTGAGGC CAGACAGCACAAGACGGGAATCTCGCTTCCGGCGACCCTCAGACCTATGC GGCGACCCAAGAACGCTGGAGCGAGGGTGCTTCGTGGAAGCTACCATGCG CTCTCACACGTTGAACTGGTTCAGGACCGACTGGGGAAATACGCGCTTCT TGTTCAGCAGTGGACATCAGCCTTTGTGTTTGAGCGATTTTTTTCTCTCG CCGGAATGTCTACGAAGCGGGTGGGAGTCTGGGCTTGAGCACAGATCGGT GGATACCTTTGTCGTACTGTACGCTCCAAAGAGCCATCGCGCGAGTGACC CGTTTTGTACCAGACAACGTATTCAAACCACGCTTGCTCTTACAGTTGTT TCCTGGCTGGCGGCAACAACTTGGCTGAAGTTCTACCGCCGTCAGGCCTT GAGGTACAGGCACCCAGTGTCGTGGACAGCGTCATGCTGGATCGAGACGA AAGGGCTCGGGCATCCAACAATTATGACGTTTCAAATGGCGCCCCCCCAA CACGTTCCTCGAGAACGGGCAAGAATGAAGCGCGTTCACATTCAGGGGTT AGGAGGAGCCACATCGAATCGAATGAAATTGAAGCTAAATTCACTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1652:508..6554+

>mRNA_E-siliculosus-1a_F_contig1652.3690.1 ID=mRNA_E-siliculosus-1a_F_contig1652.3690.1|Name=mRNA_E-siliculosus-1a_F_contig1652.3690.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2958bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1652:508..6554+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCTCGGCGCACGCGATCCGGGTTCTGTACTGTGAAGAAGGAAAAGCT
CGATGACGAGCTATTCGGCACTGACACCCCGCCATCGACGGGAACATGGG
TAGTCAAAGAGGAGCCCAAGTCATCCATCAGGCGGCAAACGCCGAACGCA
AATCACGGCGGCTCGACGTTATCCGCAACCTCCGCCGGAGGCAGCGGTGA
TCCTGAGCCCTCCGAGACGTCTCGCTATTTTGATTCTTCCCCCCCTGTGA
GAGGGAGGAAACGGAAGGCGGCAGCGAGTGTCACCGGCCCCGCCGGAGGT
AGCTGTACGACGGGCGGCAAGAGCAGGCGCCATCGAGGTGCTGGCGGTGG
CACCGGAAAAGCTTCGAAGCTGTCTGCCACACCCCCAAGCGCGACAACTG
GCGTTTGCGCGGTCGGTACCCAGCGCCGGAGTAGCGGCAGACTCAACGCC
GTGAAGAAAGAGGAGCTGACAAGCGCGCTCGAACTCCCAGAGCCATCTCC
GTCAGATGCCAAGAGGAGGACGAAGGGCGATGCCTCCACGAACGTGGATT
GCAAACCCCGGAGGAGGAGGACTGCGGTCGCTACCAAGGGCGAAGTCTGC
GTGCAGGCGTCCGAGGAGGGCAAGGGGAAGATGAAGGCCCGGACGAAGGC
AAAGGCCAAGATCGAAAAGGGGGAAGGGGTTCGGGAAAGGGCTGTTCCGC
CGCGCTTGGCGGAGAAGGCGGCGCTGATAATCCAGATTATGGACAAGCTT
TACCCGGACCCGCCTATACCGATCAACCACCTAATGGCTCGGCGCACGCG
ATCCGGGTTCTGTACTGTGAAGAAGGAAAAGCTCGATGACGAGCTATTCG
GCACTGACACCCCGCCATCGACGGGAACATGGGTAGTCAAAGAGGAGCCC
AAGTCATCCATCAGGCGGCAAACGCCGAACGCAAATCACGGCGGCTCGAC
GTTATCCGCAACCTCCGCCGGAGGCAGCGGTGATCCTGAGCCCTCCGAGA
CGTCTCGCTATTTTGATTCTTCCCCCCCTGTGAGAGGGAGGAAACGGAAG
GCGGCAGCGAGTGTCACCGGCCCCGCCGGAGGTAGCTGTACGACGGGCGG
CAAGAGCAGGCGCCATCGAGGTGCTGGCGGTGGCACCGGAAAAGCTTCGA
AGCTGTCTGCCACACCCCCAAGCGCGACAACTGGCGTTTGCGCGGTCGGT
ACCCAGCGCCGGAGTAGCGGCAGACTCAACGCCGTGAAGAAAGAGGAGCT
GACAAGCGCGCTCGAACTCCCAGAGCCATCTCCGTCAGATGCCAAGAGGA
GGACGAAGGGCGATGCCTCCACGAACGTGGATTGCAAACCCCGGAGGAGG
AGGACTGCGGTCGCTACCAAGGGCGAAGTCTGCGTGCAGGCGTCCGAGGA
GGGCAAGGGGAAGATGAAGGCCCGGACGAAGGCAAAGGCCAAGATCGAAA
AGGGGGAAGGGGTTCGGGAAAGGGCTGTTCCGCCGCGCTTGGCGGAGAAG
GCGGCGCTGATAATCCAGATTATGGACAAGCTTTACCCGGACCCGCCTAT
ACCGATCAACCACCTAGACAGCTTCACGTTGCTTTGCGGGGTGCTACTCT
CTGCTCAGACCACCGATGCTCAGGACAGCTTCACGTTGCTTTGCGGGGTG
CTACTCTCTGCTCAGACCACCGATGCTCAGGTTAACCTGGTGACGCAGGA
GTTATTCAGGGTGGCGCCCAATCCGCAGTCCTTGTCCAAGATGGCACATG
AGGATCTGCAACAGATCATCAGGTTAACCTGGTGACGCAGGAGTTATTCA
GGGTGGCGCCCAATCCGCAGTCCTTGTCCAAGATGGCACATGAGGATCTG
CAACAGATCATCAGATCCGTTGGACTTGCACCCACCAAGGCGAAGCATCT
AATCGCGCTGTCGCAGCAGATTCTAGACCGCTTCGACGGCAAGGTTCCCC
AGACGTTCGAGGGCCTCCAGAGCCTGCCCGGCGTCGATCCGTTGGACTTG
CACCCACCAAGGCGAAGCATCTAATCGCGCTGTCGCAGCAGATTCTAGAC
CGCTTCGACGGCAAGGTTCCCCAGACGTTCGAGGGCCTCCAGAGCCTGCC
CGGCGTCGGGCGCAAAACTGCTGCGGTGGTGATGGTCCAGGCCTTCAACA
CCCCTGCCTTTCCTGTGGACACACATATTCACCGATTGGCCCTTCGGTGG
GGTCTGACCAAGAATGAAAAGAACGCCAGCAAGGCGCAAAACTGCTGCGG
TGGTGATGGTCCAGGCCTTCAACACCCCTGCCTTTCCTGTGGACACACAT
ATTCACCGATTGGCCCTTCGGTGGGGTCTGACCAAGAATGAAAAGAACGC
CAGCAAGGTGGAAGAGGACCTTATGGCCGTATTCCCACGAGACTCGTGGG
CCAAGTTGCACCTTCAGTTCATCTACTTCGGCCGTGAGCACTGCCAGGGT
GGAAGAGGACCTTATGGCCGTATTCCCACGAGACTCGTGGGCCAAGTTGC
ACCTTCAGTTCATCTACTTCGGCCGTGAGCACTGCCAGGCTCGCGTGCAC
GACGTTTCGGCTTGCCCCATCTGCTCTTGGGTAAAGAAGGCTCGCGTGCA
CGACGTTTCGGCTTGCCCCATCTGCTCTTGGGTAAAGAAGACTGGACCTG
GATCCCCAAAAGCGTTGGCGGAGCTGACCTGCCTGAACGATTACCTGGCA
TCCCCTACCCCCACCAAGAAGTCCAGCAAGAACGCCATCGTCTACAGCGA
GAGGAAGCTAGAGATGGAACAGACTGGACCTGGATCCCCAAAAGCGTTGG
CGGAGCTGACCTGCCTGAACGATTACCTGGCATCCCCTACCCCCACCAAG
AAGTCCAGCAAGAACGCCATCGTCTACAGCGAGAGGAAGCTAGAGATGGA
ACAGTTCAGGATGAAACTGGAAGACAACTGATTCAGGATGAAACTGGAAG
ACAACTGA
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