mRNA_E-siliculosus-1a_F_contig16501.3685.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A5S3Q9Q9_9FLAO (PKD domain-containing protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3Q9Q9_9FLAO) HSP 1 Score: 225 bits (573), Expect = 7.860e-65 Identity = 118/194 (60.82%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 4 STSVTITVNEPVNNTPTVNAPPGYYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
S+S T+T+N V + T NAPPG+YVATNG++SNNG SPS+PWS+EHA NVAK DIIYVKAGNYGNKQ+ + +G SG+ IKFIGY++ PGDIVS+ GSTFN GESV+A KMPLL SNG G AIT++ +++ ENFQITGY GV TI +A N T KN+IVT+VG Q N + Y GF + NNT + CF+
Sbjct: 619 SSSKTVTIN--VTSPSTGNAPPGFYVATNGSASNNGTSPSSPWSLEHAINVAKGSDIIYVKAGNYGNKQLLSKRHGNSGSPIKFIGYRSTPGDIVSSQGSTFNIGESVNASKMPLLNSSNGQGAAITLYHQNIHFENFQITGYRTGVSTIDLAKNVTFKNVIVTKVGRQ-NVNGYDGFGFSIKGNNTLLENCFV 809
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A3B0TIF5_9ZZZZ (Cytochrome c551/c552 n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0TIF5_9ZZZZ) HSP 1 Score: 211 bits (537), Expect = 6.430e-60 Identity = 104/161 (64.60%), Postives = 129/161 (80.12%), Query Frame = 1
Query: 103 NNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
NNG S + WS+EHAF AKAGDIIYVKAGNYG K++ + N G+SG IKFIGYKN PGD+VSN GSTFN+GESV+A KMPLLQ SNG G AIT+HDR +++ENFQITGY+ G++TIS ATN L+NI++T+VGNQSN +SYT GF + N+T + CF+
Sbjct: 624 NNGTSEAQAWSLEHAFFTAKAGDIIYVKAGNYGKKELLSRNPGSSGNPIKFIGYKNTPGDVVSNQGSTFNYGESVNASKMPLLQSSNGQGKAITLHDRFIEIENFQITGYSHGIETISRATNIVLRNIVITKVGNQSNRNSYTGFGFNIEGNSTLLENCFV 784
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A5S3PHV6_9FLAO (DNRLRE domain-containing protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PHV6_9FLAO) HSP 1 Score: 169 bits (427), Expect = 1.780e-45 Identity = 83/171 (48.54%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 73 YYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
Y+V NG SSN+G+S + W+IEHAF+ A AGDIIY+KAG+YGNK++ +N+G + IKFIGY N PGD++SN GSTF +G+ +++ KMPL++GS+G GT I++ + HV +ENFQIT + IGV + + N L+N+++ G QS+ +SY GF + NN+ + CF+
Sbjct: 274 YFVTVNGRSSNDGRSEATAWNIEHAFDTAVAGDIIYIKAGDYGNKELVADNSGNANNPIKFIGYTNSPGDLMSNQGSTFKYGDQLNSSKMPLIRGSSG-GTGISIPENHVQIENFQITRFRIGVSSTGL--NVVLRNVVIIDQGTQSDYNSYDGFGFHIKGNNSLLENCFV 441
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: UPI00042924C3 (right-handed parallel beta-helix repeat-containing protein n=2 Tax=Arenibacter certesii TaxID=228955 RepID=UPI00042924C3) HSP 1 Score: 162 bits (411), Expect = 1.950e-43 Identity = 87/173 (50.29%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 70 GYYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNG-TGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
GY+V NG ++NNG S S+ W++EHAF VAKAGD+ Y+KAGNYGN ++ GT+G IKFIGY PGDIVS+NGSTF + + VD+ KMPLL S TGTAI + +V+ EN QITGY G+Q S + L+NI+ T +G Q N ++Y+ G V NNT + C++
Sbjct: 216 GYFVTVNGRATNNGLSESSAWNLEHAFKVAKAGDVFYIKAGNYGNPKLVLYKGGTAGNPIKFIGYNRTPGDIVSHNGSTFKYRDQVDSNKMPLLTASRAATGTAIIQYADYVEFENLQITGYKTGIQ--SDGNHVVLRNIVATNLGTQ-NYNTYSGFGLMVTGNNTLVENCYI 385
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A372GV03_9FLAO (Uncharacterized protein n=2 Tax=Arenibacter sp. P308M17 TaxID=2303391 RepID=A0A372GV03_9FLAO) HSP 1 Score: 159 bits (401), Expect = 2.370e-42 Identity = 83/171 (48.54%), Postives = 117/171 (68.42%), Query Frame = 1
Query: 73 YYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
YYV T G SSNNG + ++ WSI+HAF+ AKAGD++Y+KAGNYG + ++N+GT+ IKFIGY PGD+VSNNGSTFN+G+ +DA KMPL G G TAITV + + LEN QI+ Y G +S + TL+NII T++G Q++ ++Y G + +N+ + F+
Sbjct: 146 YYVTTTGKSSNNGGTEASAWSIQHAFSAAKAGDVVYIKAGNYGALNLTSSNSGTASNPIKFIGYTKNPGDLVSNNGSTFNYGDKLDANKMPLFSGQLGK-TAITVQNNYFQLENIQISKY--GTAIMSNGKHVTLRNIIATQLGTQTDYNAYDGRGLMITGDNSLIENVFV 313
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A4R7K3T0_9FLAO (Parallel beta helix pectate lyase-like protein n=2 Tax=Maribacter spongiicola TaxID=1206753 RepID=A0A4R7K3T0_9FLAO) HSP 1 Score: 159 bits (402), Expect = 3.590e-42 Identity = 81/147 (55.10%), Postives = 105/147 (71.43%), Query Frame = 1
Query: 73 YYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQS 513
YYV T+GN NNG+S S WS+ HAF AKAGDIIY+KAGNYG+ ++ N +G SG IKFIGY N PGDI++N GSTFN+G++ DA KMPLL SN TG I + HV+L NFQ+ ++IG++ + N TL N++V +GNQS
Sbjct: 219 YYVTTSGNGGNNGKSVSASWSLAHAFGSAKAGDIIYIKAGNYGSSKMTINKSGASGNTIKFIGYTNEPGDIIANQGSTFNYGDNADATKMPLLD-SNNTGEGIIIAGAHVELHNFQVKDFSIGIK--ASGQNVTLNNVVVLDMGNQS 362
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A3B0T423_9ZZZZ (Beta_helix domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T423_9ZZZZ) HSP 1 Score: 155 bits (391), Expect = 1.570e-40 Identity = 82/172 (47.67%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 70 GYYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
GY+V T+G +SN+G S + WSIE+AF+ A AGDI+Y+KAG+YG+K++ +N+GT+ IKFIGY N PGD+VSN GSTF++G +D KMPL++ + G GT I + + V++ENFQIT Y IG+ ++ N L+NII T G QS S+Y G ++ NN + F+
Sbjct: 242 GYFVTTSGKASNDGLSEATAWSIEYAFDRAIAGDIVYIKAGDYGSKELVADNSGTADKPIKFIGYTNTPGDLVSNEGSTFSYGNQLDPGKMPLIKSTQG-GTGIFIQENFVEIENFQITRYRIGL--VATGRNLVLRNIIATDFGTQSAYSAYDGFGIQIKGNNCLLENSFV 410
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A3M8GEH0_9FLAO (DNRLRE domain-containing protein n=1 Tax=Muricauda sp. TaxID=192149 RepID=A0A3M8GEH0_9FLAO) HSP 1 Score: 154 bits (390), Expect = 3.540e-40 Identity = 81/178 (45.51%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 58 NAPP--GYYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGSNGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSYTRNGFKVASNNTKPDKCFL 585
N PP YV NG+ +N+G S +N W++E+AF+ A AGD++Y+KAGNYG Q+ +N+GT G I+FIGY N PGDIVSN GSTF++G+ +DA KMPL+ ++G I + + ++++ENFQIT Y G+Q+ + N L+NI+ T G QSN SSY G + +N+ + F+
Sbjct: 326 NRPPDGALYVTPNGSPNNDGLSEANAWNLEYAFSAAAAGDVVYIKAGNYGALQLNADNSGTPGNPIRFIGYTNTPGDIVSNEGSTFSYGDQLDANKMPLI--ASGGNIGIQIWEDYIEIENFQITNYTTGIQSTGM--NVVLRNIVATNFGTQSNYSSYDGFGIVLGGDNSLLENSFV 499
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: UPI001C068527 (Ig-like domain-containing protein n=1 Tax=Arenibacter algicola TaxID=616991 RepID=UPI001C068527) HSP 1 Score: 150 bits (380), Expect = 2.490e-39 Identity = 86/183 (46.99%), Postives = 119/183 (65.03%), Query Frame = 1
Query: 73 YYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQG--SNGT--GTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQS------NASS--YTRNGFKVASNNTKPDKCFL 585
YYV T GNSSN G + S W I++AF AKAGD++Y+KAGNYGN ++ T N+GT+ IKFIGY N PGD+VSN GSTF +G+ +D KMPLL+G SNG G AIT++ + +ENFQI+ Y+ G+ +S + N++ NI+ GN + NASS Y+ G V+ +N+ C +
Sbjct: 146 YYVTTMGNSSNKGATESTAWDIQYAFKTAKAGDVVYIKAGNYGNVELVTGNSGTASKPIKFIGYSNAPGDVVSNQGSTFTYGDKLDTNKMPLLEGKSSNGEVEGKAITINKPYTYIENFQISKYSTGL--VSTGSYNSIINIVSIDAGNHNPSKNRPNASSDQYSGVGINVSGDNSIIKNCMV 326
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Match: A0A1I6H213_9FLAO (PKD repeat-containing protein n=1 Tax=Robiginitalea myxolifaciens TaxID=400055 RepID=A0A1I6H213_9FLAO) HSP 1 Score: 150 bits (378), Expect = 2.030e-38 Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 1
Query: 70 GYYVATNGNSSNNGQSPSNPWSIEHAFNVAKAGDIIYVKAGNYGNKQVRTNNNGTSGAHIKFIGYKNPPGDIVSNNGSTFNFGESVDARKMPLLQGS----NGTGTAITVHDRHVDLENFQITGYNIGVQTISIATNNTLKNIIVTRVGNQSNASSY-----------TRNGFKVASNNTK 567
GYYV +G++ +G S S WS+EHAF+ A+ GDI+YVKAGNYGNKQ+ N +G+ G IKFIGY N PGDIV+ S+FN+GE ++A KMPLL+GS G+GT + ++ +ENFQ T Y G+Q SI N KNII ++G+ + + SY + NG +A NN K
Sbjct: 473 GYYVTPSGSAYASGLSESTAWSLEHAFDAAQPGDIVYVKAGNYGNKQIHVNRSGSYGNPIKFIGYTNTPGDIVTYGSSSFNYGEQLNASKMPLLRGSAPSGEGSGTGFYITGSYIHVENFQFTEYEFGLQ--SIGQYNEFKNIIAVKIGDYNPSHSYPSATSNAFLNYSGNGIWLAGNNVK 651 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16501.3685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig16501.3685.1 >prot_E-siliculosus-1a_F_contig16501.3685.1 ID=prot_E-siliculosus-1a_F_contig16501.3685.1|Name=mRNA_E-siliculosus-1a_F_contig16501.3685.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=195bp SSTSVTITVNEPVNNTPTVNAPPGYYVATNGNSSNNGQSPSNPWSIEHAFback to top mRNA from alignment at E-siliculosus-1a_F_contig16501:261..845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig16501.3685.1 ID=mRNA_E-siliculosus-1a_F_contig16501.3685.1|Name=mRNA_E-siliculosus-1a_F_contig16501.3685.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=585bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16501:261..845+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16501:261..845+ >mRNA_E-siliculosus-1a_F_contig16501.3685.1 ID=mRNA_E-siliculosus-1a_F_contig16501.3685.1|Name=mRNA_E-siliculosus-1a_F_contig16501.3685.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1170bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16501:261..845+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |