mRNA_E-siliculosus-1a_F_contig16483.3672.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig16483.3672.1
Unique NamemRNA_E-siliculosus-1a_F_contig16483.3672.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: A0A5S3PNI6_9FLAO (T9SS type B sorting domain-containing protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PNI6_9FLAO)

HSP 1 Score: 283 bits (725), Expect = 4.990e-85
Identity = 227/281 (80.78%), Postives = 234/281 (83.27%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRD DDDGDGI+TP         PTND    XGTPDYLD   D+   XXXXXXXXXXXX      GILD+VEDPN+DGD+DPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPN DDEATY AN+GLN+AY PDGLTPNNHDGEDTPDYIDLDSDNDTV DNNEGNDFNFDG     XXXXXXXXXXXXXXXXXXXIND FDVNDEIDDPANDLPDTDGTEDVNYRD D       TPDED DGDGDPTND  XXXXTPDYL
Sbjct:  403 PDTDGTEDVNYRDIDDDGDGINTPDEDVDGDGDPTNDDSDGXGTPDYLDNNTDVXXXXXXXXXXXXXXXX---XXGILDSVEDPNIDGDNDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNEDDEATYEANNGLNSAY-PDGLTPNNHDGEDTPDYIDLDSDNDTVPDNNEGNDFNFDGIPDQVXXXXXXXXXXXXXXXXXXXINDSFDVNDEIDDPANDLPDTDGTEDVNYRDIDDDGDGINTPDEDVDGDGDPTNDDSXXXXTPDYL 679          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: A0A1M6K1V3_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Pseudozobellia thermophila TaxID=192903 RepID=A0A1M6K1V3_9FLAO)

HSP 1 Score: 280 bits (717), Expect = 7.750e-84
Identity = 205/281 (72.95%), Postives = 216/281 (76.87%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRDFDDDGDGIDTP         PTND     GTPDYLDP +D  + XXXXXXXXXXX L DDNDGILDTVEDPNLDGD+DPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXX     GYIAPN+DDEATY AN+G+N+AY PDGL P + DG+ TPDY+D DSDNDTV DNNEGNDFNFDG                        +NDGFDVNDEIDDPANDLPDTDGTEDVNYRDFD  XXXXXTPDEDADGDGDPTND      TPDYL
Sbjct:  409 PDTDGTEDVNYRDFDDDGDGIDTPDEDVDGDGDPTNDDTDEDGTPDYLDPSEDTTKXXXXXXXXXXXX-LXDDNDGILDTVEDPNLDGDNDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYIAPNDDDEATYEANNGVNSAY-PDGLDPVDTDGDGTPDYLDEDSDNDTVPDNNEGNDFNFDGVPDQTFVGSDTDGDGLDDGYEGTDVNDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDDDXXXXXTPDEDADGDGDPTNDDTDEDGTPDYL 687          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: UPI00137814B6 (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Cellulophaga geojensis TaxID=935699 RepID=UPI00137814B6)

HSP 1 Score: 257 bits (657), Expect = 3.100e-80
Identity = 222/270 (82.22%), Postives = 231/270 (85.56%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTND 810
            PDTDGTEDVNYRD DDDGDGI   XXXXXXXX PTNDX XXXGTPDYLDP D+ P TXXXXXXXXX   LDDDNDGILDTVED N+DGD+DPLTNP XXXXXXXXXXXXXXXXXXXXXXXXX QTT GYIAPNNDD ATY ANDG+N+AYL  GLTPNNHDGEDTPDYIDLDSDND+V DNNEGNDF+FDG     XXXXXXXXXXXXXXXXXX +NDGFDVNDEI+DPANDLPDTD           XXXXXX TPDEDADGDGDPTND
Sbjct:   34 PDTDGTEDVNYRDLDDDGDGIXXXXXXXXXXXDPTNDXTXXXGTPDYLDPTDNTPGTXXXXXXXXXTVDLDDDNDGILDTVEDENIDGDNDPLTNPAXXXXXXXXXXXXXXXXXXXXXXXXXXQTTAGYIAPNNDDAATYLANDGVNSAYLG-GLTPNNHDGEDTPDYIDLDSDNDSVPDNNEGNDFDFDGVPDQQXXXXXXXXXXXXXXXXXXDVNDGFDVNDEINDPANDLPDTDXXXXXXXXXXXXXXXXXNTPDEDADGDGDPTND 302          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: UPI00069B12D2 (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Maribacter thermophilus TaxID=1197874 RepID=UPI00069B12D2)

HSP 1 Score: 253 bits (645), Expect = 1.640e-77
Identity = 237/281 (84.34%), Postives = 255/281 (90.75%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRD DDDGDGIDTP XXXXXXX PTNDXXXXX TPDYLDP D  PE XXXXXXXXXXXXLDDDNDGILD+VEDP+LDGD DPLT+PLXXXXXXXXXXXXXXXXXXXXXXXXX QTT GY+APN+DDEATYA+NDG+N+AY P G++P + DG+ TPDYIDLDSD+DTV DNNEG+DF++  XXXXXXXXXXXXXXXXXXXXXXXX++DGFDVNDEIDDPANDLPDTDGTEDV      XXXXXXXTPDEDADGDGDPTNDXXXXXX PDYL
Sbjct:   19 PDTDGTEDVNYRDLDDDGDGIDTPDXXXXXXXDPTNDXXXXXXTPDYLDP-DSSPEKXXXXXXXXXXXXLDDDNDGILDSVEDPDLDGDGDPLTDPLXXXXXXXXXXXXXXXXXXXXXXXXXGQTTAGYVAPNDDDEATYASNDGVNSAY-PGGVSPVDTDGDGTPDYIDLDSDDDTVPDNNEGHDFDYXXXXXXXXXXXXXXXXXXXXXXXXXXVDDGFDVNDEIDDPANDLPDTDGTEDVXXXXXXXXXXXXXTPDEDADGDGDPTNDXXXXXXXPDYL 297          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: UPI00040E81FD (hypothetical protein n=1 Tax=Cellulophaga baltica TaxID=76594 RepID=UPI00040E81FD)

HSP 1 Score: 259 bits (662), Expect = 3.670e-76
Identity = 226/281 (80.43%), Postives = 236/281 (83.99%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRD DD     +TP         PTNDXXXXX TPDYLDP DD   TXXXXXXXXXXXX     DGILDTVED N+DGD+DPLT+P XXXXXXXXXXXXXXXXXXXXXXXXX     GYIAPN DDEATYAAN+GLN+AY PDGLTPNNHDGEDTPDYIDLDSDND+V DNNEGNDFNFDG XXXXXXXXXXXXXXXXXXXXXXX+NDGFDVNDEI+DPANDLPDTDGTEDVNYRD DXXXXX  TPDEDA+GDGDPTND      TPDYL
Sbjct:  612 PDTDGTEDVNYRDLDDXXXXXNTPDEDADGDGDPTNDXXXXXXTPDYLDPTDDN-GTXXXXXXXXXXXXXXXXXDGILDTVEDANVDGDNDPLTDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYIAPNEDDEATYAANNGLNSAY-PDGLTPNNHDGEDTPDYIDLDSDNDSVPDNNEGNDFNFDGIXXXXXXXXXXXXXXXXXXXXXXXVNDGFDVNDEINDPANDLPDTDGTEDVNYRDLDXXXXXINTPDEDANGDGDPTNDDTDGDGTPDYL 890          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: UPI00046454D7 (gliding motility-associated C-terminal domain-containing protein n=1 Tax=Cellulophaga baltica TaxID=76594 RepID=UPI00046454D7)

HSP 1 Score: 248 bits (634), Expect = 2.070e-74
Identity = 232/336 (69.05%), Postives = 242/336 (72.02%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDF--------------------------DDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTT-----------------------------EGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRD                           DDDGDGI+TP         PTND     GTPDYLDP DD   TXXXXXXXXXXXX     DGILD VED N+DGD+DPLT+P XXXXXXXXXXXXXXXXXXXXXX   AQTT                             EGYIAPN DDEATYAAN+GLN+AY PDGLTPNNHDGEDTPDYIDLDSDND+V DNNEGNDFNF  XXXXXXXXXXXXXXXXXXXXXXXX+NDGFDVNDEI+DPANDLPDTDGTEDVNYRD DXXXXX  TPDEDA+GDGDPTNDXXXXX TPDYL
Sbjct:  206 PDTDGTEDVNYRDLXXXXXXXXXXXXXXXXXXXXXXXXXXDDDGDGINTPDEDADGDGDPTNDDTDGDGTPDYLDPTDDN-GTXXXXXXXXXXXXXXXXXDGILDIVEDANVDGDNDPLTDPTXXXXXXXXXXXXXXXXXXXXXXNVEAQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGYIAPNEDDEATYAANNGLNSAY-PDGLTPNNHDGEDTPDYIDLDSDNDSVPDNNEGNDFNFXXXXXXXXXXXXXXXXXXXXXXXXXXVNDGFDVNDEINDPANDLPDTDGTEDVNYRDLDXXXXXINTPDEDANGDGDPTNDXXXXXGTPDYL 539          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: A0A7W2S521_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=3 Tax=Cellulophaga TaxID=104264 RepID=A0A7W2S521_9FLAO)

HSP 1 Score: 254 bits (649), Expect = 2.680e-74
Identity = 220/281 (78.29%), Postives = 230/281 (81.85%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRD D     I+TP         PTND     GTPDYLDP DD   TXXXXXXXXXXXX     DGILDTVED N+DGD+DPLT+P XXXXXXXXXXXXXXXXXXXXXXXXX     GYIAPN DDEATY AN+GLN+AY PDGLTPNNHDGEDTPDYIDLDSDND+V DNNEGNDFNF  XXXXXXXXXXXXXXXXXXXXXXXX+NDGFDVNDEI+DPANDLPDTDGTEDVNYRD DXXXXX  TPDEDA+GDGDPTND      TPDYL
Sbjct:  380 PDTDGTEDVNYRDLDXXXXXINTPDEDANGDGDPTNDDTDGDGTPDYLDPTDDN-GTXXXXXXXXXXXXXXXXXDGILDTVEDANVDGDNDPLTDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYIAPNEDDEATYTANNGLNSAY-PDGLTPNNHDGEDTPDYIDLDSDNDSVPDNNEGNDFNFXXXXXXXXXXXXXXXXXXXXXXXXXXVNDGFDVNDEINDPANDLPDTDGTEDVNYRDLDXXXXXINTPDEDANGDGDPTNDDTDGDGTPDYL 658          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: F0RA26_CELLC (Thrombospondin type 3 repeat-containing protein n=6 Tax=Cellulophaga TaxID=104264 RepID=F0RA26_CELLC)

HSP 1 Score: 256 bits (654), Expect = 4.400e-74
Identity = 214/270 (79.26%), Postives = 224/270 (82.96%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTND 810
            PDTDGTEDVNYRD DDDG   +TP    X    PTNDX XXXGTPDYLDP D+ P TXXXXXXXXX   LDDDNDGILDTVED N+DGD+DPLTNP XXXXXXXXXXXXXXXXXXXXXXXXX QTT GYIAPNNDD ATY ANDG+N+AYL  GLTPNNHDGEDTPDYIDLDSDND+V DNNEGNDF+FDG     XXXXXXXXXXXXXXXXXX +NDGFDVNDEI+DPANDLPDTD           XXXXXX TPDEDADGDGDPTND
Sbjct: 1142 PDTDGTEDVNYRDLDDDGXXXNTPDEDAXGDGDPTNDXTXXXGTPDYLDPTDNTPGTXXXXXXXXXTVDLDDDNDGILDTVEDENIDGDNDPLTNPAXXXXXXXXXXXXXXXXXXXXXXXXXXQTTAGYIAPNNDDAATYLANDGVNSAYLG-GLTPNNHDGEDTPDYIDLDSDNDSVPDNNEGNDFDFDGVPDQQXXXXXXXXXXXXXXXXXXDVNDGFDVNDEINDPANDLPDTDXXXXXXXXXXXXXXXXXNTPDEDADGDGDPTND 1410          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: A0A1I6FNX1_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Robiginitalea myxolifaciens TaxID=400055 RepID=A0A1I6FNX1_9FLAO)

HSP 1 Score: 253 bits (647), Expect = 1.620e-73
Identity = 212/282 (75.18%), Postives = 225/282 (79.79%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDM-PETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTEDVNYRD DDDGD IDTP        XPTN XXXXX   DYLDP   M P TXXXXXXXX X  +DDDNDGILDTVEDPN DGD+DPLTNP XXXXXXXXXXXXXXXXXXXXXXXXXAQ T  Y+APN DDEATYAANDGLN+AY+PDG+ P + DG+ TPDY+D DSDNDTV DNNEGNDFNFDG        XXXXXXXXXXXXXXXX+ND FDVNDEID+PA DLPDTDGTEDVNYRD D       T +EDAD +GDPTNDX XX  TPDYL
Sbjct:  761 PDTDGTEDVNYRDIDDDGDDIDTPDEDVDEDGXPTNXXXXXXXXXDYLDPDSPMGPXTXXXXXXXXEX--IDDDNDGILDTVEDPNTDGDNDPLTNPQXXXXXXXXXXXXXXXXXXXXXXXXXAQPTFTYVAPNPDDEATYAANDGLNSAYIPDGIDPVDSDGDGTPDYLDSDSDNDTVPDNNEGNDFNFDGIPDQTFTGXXXXXXXXXXXXXXXXVNDDFDVNDEIDNPATDLPDTDGTEDVNYRDVDDDGDGIPTMEEDADNNGDPTNDXFXXDGTPDYL 1040          
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Match: A0A316KUS9_9FLAO (Uncharacterized protein n=1 Tax=Muricauda koreensis TaxID=2201895 RepID=A0A316KUS9_9FLAO)

HSP 1 Score: 254 bits (649), Expect = 2.080e-73
Identity = 227/281 (80.78%), Postives = 238/281 (84.70%), Query Frame = 1
Query:    1 PDTDGTEDVNYRDFDDDGDGIDTPXXXXXXXXXPTNDXXXXXGTPDYLDPMDDMPETXXXXXXXXXXXXLDDDNDGILDTVEDPNLDGDDDPLTNPLXXXXXXXXXXXXXXXXXXXXXXXXXAQTTEGYIAPNNDDEATYAANDGLNTAYLPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGXXXXXXXXXXXXXXXXXXXXXXXXINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDXXXXXXXTPDEDADGDGDPTNDXXXXXXTPDYL 843
            PDTDGTE+VNYRDFDDDGDGIDTP         PTNDXXXXXGTPDYLDP +D    XXXXXXXXXXXX      GILDTVEDPNLD D+DPLT+PLXXXXXXXXXXXXXXXXXXXXXXXX AQ T GYIAPN+DDEATY ANDG+N+AYL  GL P N DGED PDY+D DSDND VADNNEGNDFNF  XXXXXXXXXXXXXXXXXXXXXXXX+NDG+DVNDEIDDP+NDLPDTDGTEDVNYRDFD  XXX  TPDED D DGDPTN XXXXXX PDYL
Sbjct:  412 PDTDGTEEVNYRDFDDDGDGIDTPDEDVDQDGDPTNDXXXXXGTPDYLDPNEDGXXXXXXXXXXXXXXXXX--XXGILDTVEDPNLDNDNDPLTDPLXXXXXXXXXXXXXXXXXXXXXXXXEAQPTTGYIAPNDDDEATYTANDGVNSAYLG-GLAPENTDGEDEPDYLDDDSDNDLVADNNEGNDFNFXXXXXXXXXXXXXXXXXXXXXXXXXXVNDGYDVNDEIDDPSNDLPDTDGTEDVNYRDFDDDXXXIDTPDEDVDQDGDPTNXXXXXXXXPDYL 689          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16483.3672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PNI6_9FLAO4.990e-8580.78T9SS type B sorting domain-containing protein n=1 ... [more]
A0A1M6K1V3_9FLAO7.750e-8472.95Gliding motility-associated C-terminal domain-cont... [more]
UPI00137814B63.100e-8082.22gliding motility-associated C-terminal domain-cont... [more]
UPI00069B12D21.640e-7784.34gliding motility-associated C-terminal domain-cont... [more]
UPI00040E81FD3.670e-7680.43hypothetical protein n=1 Tax=Cellulophaga baltica ... [more]
UPI00046454D72.070e-7469.05gliding motility-associated C-terminal domain-cont... [more]
A0A7W2S521_9FLAO2.680e-7478.29Gliding motility-associated C-terminal domain-cont... [more]
F0RA26_CELLC4.400e-7479.26Thrombospondin type 3 repeat-containing protein n=... [more]
A0A1I6FNX1_9FLAO1.620e-7375.18Gliding motility-associated C-terminal domain-cont... [more]
A0A316KUS9_9FLAO2.080e-7380.78Uncharacterized protein n=1 Tax=Muricauda koreensi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig16483contigE-siliculosus-1a_F_contig16483:3..845 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size843
Model size843
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelCellulophaga
COG Functional cat.J
EggNOG OGs1F9ZS@104264,1IKB1@117743,4PKHZ@976,COG5384@1,COG5384@2
EggNOG free text desc.C-terminal domain of CHU protein family
Seed eggNOG ortholog867900.Celly_0520
Seed ortholog evalue6.8e-68
Seed ortholog score264.2
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928154.5181067-CDS-E-siliculosus-1a_F_contig16483:2..8451622928154.5181067-CDS-E-siliculosus-1a_F_contig16483:2..845Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16483 3..845 +
1696318826.4573655-CDS-E-siliculosus-1a_F_contig16483:2..8451696318826.4573655-CDS-E-siliculosus-1a_F_contig16483:2..845Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16483 3..845 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig16483.3672.1prot_E-siliculosus-1a_F_contig16483.3672.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig16483 3..845 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig16483.3672.1

>prot_E-siliculosus-1a_F_contig16483.3672.1 ID=prot_E-siliculosus-1a_F_contig16483.3672.1|Name=mRNA_E-siliculosus-1a_F_contig16483.3672.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=281bp
PDTDGTEDVNYRDFDDDGDGIDTPDEDADGDGDPTNDDTDGDGTPDYLDP
MDDMPETDTDGDGVPDVTDLDDDNDGILDTVEDPNLDGDDDPLTNPLDTD
GDGIPNHLDIDADDDGIPDNVEAQTTEGYIAPNNDDEATYAANDGLNTAY
LPDGLTPNNHDGEDTPDYIDLDSDNDTVADNNEGNDFNFDGIPDQTYLGT
DADGDGLDDGYEGSDINDGFDVNDEIDDPANDLPDTDGTEDVNYRDFDDD
GDGIDTPDEDADGDGDPTNDDTDGDGTPDYL
back to top

mRNA from alignment at E-siliculosus-1a_F_contig16483:3..845+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig16483.3672.1 ID=mRNA_E-siliculosus-1a_F_contig16483.3672.1|Name=mRNA_E-siliculosus-1a_F_contig16483.3672.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=843bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16483:3..845+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCAGATACAGATGGTACAGAAGATGTAAACTACCGAGATTTTGATGATGA CGGTGATGGTATTGATACCCCTGATGAAGATGCTGATGGTGATGGTGACC CAACTAATGATGACACTGATGGTGATGGTACTCCTGATTACTTAGATCCG ATGGATGATATGCCTGAAACAGATACTGATGGAGATGGTGTGCCAGATGT TACAGATTTAGATGATGATAATGATGGTATATTAGATACTGTTGAAGATC CGAATCTAGATGGAGATGATGATCCATTGACTAATCCTTTAGATACAGAT GGTGATGGTATTCCAAATCATTTAGACATAGATGCTGATGATGATGGTAT TCCAGATAATGTAGAAGCACAAACTACGGAAGGTTATATTGCTCCAAATA ATGATGATGAAGCAACGTATGCTGCAAACGATGGATTGAACACTGCATAT TTACCTGATGGTTTAACTCCAAACAATCATGATGGAGAAGATACACCTGA TTACATTGATTTAGATAGTGATAATGATACAGTCGCAGATAACAATGAGG GTAACGATTTCAACTTTGATGGTATTCCTGATCAGACGTATTTAGGAACT GATGCTGATGGTGATGGTCTAGATGATGGTTACGAGGGAAGCGATATCAA TGACGGTTTTGATGTAAATGATGAGATTGATGATCCTGCAAATGATTTAC CAGATACAGATGGTACAGAAGATGTAAACTACCGAGATTTTGATGATGAC GGTGATGGTATTGATACCCCTGATGAAGATGCTGATGGTGATGGTGACCC AACTAATGATGACACTGATGGTGATGGTACTCCTGATTACTTA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16483:3..845+

>mRNA_E-siliculosus-1a_F_contig16483.3672.1 ID=mRNA_E-siliculosus-1a_F_contig16483.3672.1|Name=mRNA_E-siliculosus-1a_F_contig16483.3672.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1686bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16483:3..845+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCAGATACAGATGGTACAGAAGATGTAAACTACCGAGATTTTGATGATGA
CGGTGATGGTATTGATACCCCTGATGAAGATGCTGATGGTGATGGTGACC
CAACTAATGATGACACTGATGGTGATGGTACTCCTGATTACTTAGATCCG
ATGGATGATATGCCTGAAACAGATACTGATGGAGATGGTGTGCCAGATGT
TACAGATTTAGATGATGATAATGATGGTATATTAGATACTGTTGAAGATC
CGAATCTAGATGGAGATGATGATCCATTGACTAATCCTTTAGATACAGAT
GGTGATGGTATTCCAAATCATTTAGACATAGATGCTGATGATGATGGTAT
TCCAGATAATGTAGAAGCACAAACTACGGAAGGTTATATTGCTCCAAATA
ATGATGATGAAGCAACGTATGCTGCAAACGATGGATTGAACACTGCATAT
TTACCTGATGGTTTAACTCCAAACAATCATGATGGAGAAGATACACCTGA
TTACATTGATTTAGATAGTGATAATGATACAGTCGCAGATAACAATGAGG
GTAACGATTTCAACTTTGATGGTATTCCTGATCAGACGTATTTAGGAACT
GATGCTGATGGTGATGGTCTAGATGATGGTTACGAGGGAAGCGATATCAA
TGACGGTTTTGATGTAAATGATGAGATTGATGATCCTGCAAATGATTTAC
CAGATACAGATGGTACAGAAGATGTAAACTACCGAGATTTTGATGATGAC
GGTGATGGTATTGATACCCCTGATGAAGATGCTGATGGTGATGGTGACCC
AACTAATGATGACACTGATGGTGATGGTACTCCTGATTACTTACCAGATA
CAGATGGTACAGAAGATGTAAACTACCGAGATTTTGATGATGACGGTGAT
GGTATTGATACCCCTGATGAAGATGCTGATGGTGATGGTGACCCAACTAA
TGATGACACTGATGGTGATGGTACTCCTGATTACTTAGATCCGATGGATG
ATATGCCTGAAACAGATACTGATGGAGATGGTGTGCCAGATGTTACAGAT
TTAGATGATGATAATGATGGTATATTAGATACTGTTGAAGATCCGAATCT
AGATGGAGATGATGATCCATTGACTAATCCTTTAGATACAGATGGTGATG
GTATTCCAAATCATTTAGACATAGATGCTGATGATGATGGTATTCCAGAT
AATGTAGAAGCACAAACTACGGAAGGTTATATTGCTCCAAATAATGATGA
TGAAGCAACGTATGCTGCAAACGATGGATTGAACACTGCATATTTACCTG
ATGGTTTAACTCCAAACAATCATGATGGAGAAGATACACCTGATTACATT
GATTTAGATAGTGATAATGATACAGTCGCAGATAACAATGAGGGTAACGA
TTTCAACTTTGATGGTATTCCTGATCAGACGTATTTAGGAACTGATGCTG
ATGGTGATGGTCTAGATGATGGTTACGAGGGAAGCGATATCAATGACGGT
TTTGATGTAAATGATGAGATTGATGATCCTGCAAATGATTTACCAGATAC
AGATGGTACAGAAGATGTAAACTACCGAGATTTTGATGATGACGGTGATG
GTATTGATACCCCTGATGAAGATGCTGATGGTGATGGTGACCCAACTAAT
GATGACACTGATGGTGATGGTACTCCTGATTACTTA
back to top