mRNA_E-siliculosus-1a_F_contig16410.3636.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE) HSP 1 Score: 302 bits (773), Expect = 7.370e-99 Identity = 149/174 (85.63%), Postives = 159/174 (91.38%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKEAAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNL 522
KKV LLWDNCPGH+IKNDDPQIVIIFLPPNV SVFQPMDMGILFALK QYKTEMVMRLAALIEDWDTARAR+IR GCRGL+DAGQ MLDVTE+LSQKWESFSDQTV+RCWLKA I P EH++ALK DTRLDRED A ALDDLCDMV+KMSMPESAKDLDARS PRVL+DN+
Sbjct: 164 KKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEMVMRLAALIEDWDTARARQIRTGCRGLNDAGQPTMLDVTEVLSQKWESFSDQTVIRCWLKATIRPGEHESALKDNDTRLDREDPGATALDDLCDMVEKMSMPESAKDLDARSKPRVLTDNM 337
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE) HSP 1 Score: 304 bits (778), Expect = 2.050e-98 Identity = 154/189 (81.48%), Postives = 167/189 (88.36%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKE-AAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQEVQ 564
KKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMGILFALK QYKTEMV RLA LI+ WD RARKIRRGCRGL+DAGQA MLDVTEILS+KWESFS QTV+RCWLKA ILPREH+NALKG+DTRLDREDKE A +DDLC+MV KMSMP SA D +RS RVL+DNLFVE SGLT+ EV+
Sbjct: 241 KKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSMPASATD--SRSTARVLTDNLFVEKASGLTDAEVR 427
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE) HSP 1 Score: 304 bits (778), Expect = 5.710e-97 Identity = 154/189 (81.48%), Postives = 167/189 (88.36%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKE-AAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQEVQ 564
KKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMGILFALK QYKTEMV RLA LI+ WD RARKIRRGCRGL+DAGQA MLDVTEILS+KWESFS QTV+RCWLKA ILPREH+NALKG+DTRLDREDKE A +DDLC+MV KMSMP SA D +RS RVL+DNLFVE SGLT+ EV+
Sbjct: 446 KKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSMPASATD--SRSTARVLTDNLFVEKASGLTDAEVR 632
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE) HSP 1 Score: 285 bits (729), Expect = 1.330e-90 Identity = 147/189 (77.78%), Postives = 158/189 (83.60%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKE-AAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQEVQ 564
KKV LLWDNCPGHKIK++DPQIVIIFLPPNV SV+QPM+MGILF LK QYKTEMV RLA LIEDWDT RARKI+RGCRGLSDAGQA MLDVTEI SQKW SF QTV+RCWLKA ILPREH LKG DTRLDREDK+ AA +D LCDM KMSMP S D RSMPRVL+DNLFVE + LTEQEV+
Sbjct: 278 KKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEMVARLADLIEDWDTVRARKIQRGCRGLSDAGQATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCKVLKGMDTRLDREDKDDAAIIDGLCDMATKMSMPASVTD--CRSMPRVLTDNLFVEKGTDLTEQEVR 464
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5KIE7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE7_9PHAE) HSP 1 Score: 275 bits (702), Expect = 2.570e-89 Identity = 141/189 (74.60%), Postives = 156/189 (82.54%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKE-AAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQEVQ 564
KKV LLWDNCPGHKIK++DPQIVIIFLPP +TSV+QPMDMGILF LK +YKTEMV RLA LIEDWDT RARK +RGC+GLSDAGQA MLDVTEI SQKW SF QTV+ CWLKA ILPREH N LKG DTR+DREDK+ AA +D LCDMV KM+MP S RSMPRVL+DNL VE + LTEQEV+
Sbjct: 75 KKVALLWDNCPGHKIKSNDPQIVIIFLPPEITSVYQPMDMGILFVLKCRYKTEMVARLADLIEDWDTVRARKFQRGCQGLSDAGQATMLDVTEIGSQKWRSFDVQTVITCWLKAGILPREHCNVLKGMDTRVDREDKDDAAIIDGLCDMVSKMAMPASVTGY--RSMPRVLTDNLLVEKGTDLTEQEVR 261
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE) HSP 1 Score: 268 bits (686), Expect = 7.150e-83 Identity = 140/185 (75.68%), Postives = 151/185 (81.62%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKEAAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQ 555
KK+ LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMGILFALK QYKT+M+MR GL+DAGQ MLDVTEILSQKWESFSDQTV+RCWLKA ILP EH++ALK DTRLDRED AAALDDL DMV+KMSMPESAKDLDARS PRVL+DNLFVES SGLTE+
Sbjct: 527 KKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKCQYKTKMLMR---------------------GLNDAGQPTMLDVTEILSQKWESFSDQTVIRCWLKATILPGEHESALKDNDTRLDREDPGAAALDDLYDMVEKMSMPESAKDLDARSKPRVLTDNLFVESASGLTEE 690
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5KSV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV5_9PHAE) HSP 1 Score: 232 bits (592), Expect = 3.170e-75 Identity = 122/151 (80.79%), Postives = 134/151 (88.74%), Query Frame = 1
Query: 112 MDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKEAAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQEVQ 564
M MGILFALK QYKTEMVMRLAALIEDWDTARA KIRRG RGL+DAGQ MLDVTEI SQKWES SDQTV+RCWLKA ILP EH++ALK +DTRLD+ED AA+LDDLCDMV+KMSM ESAKDLDARS PRVL++NLFVES SGLT +EV+
Sbjct: 1 MVMGILFALKCQYKTEMVMRLAALIEDWDTARALKIRRGYRGLNDAGQPTMLDVTEIPSQKWESVSDQTVIRCWLKATILPGEHESALKDKDTRLDQEDPGAASLDDLCDMVEKMSMAESAKDLDARSQPRVLTENLFVESASGLTGEEVR 151
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.830e-74 Identity = 126/185 (68.11%), Postives = 137/185 (74.05%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDKEAAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDNLFVESTSGLTEQ 555
KKV LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG CRGL++AGQ MLDVTEILSQKWESF DQTV+RCWLKA ILP EH++ALK +DTRLDRED AAALDDLCDMV+KMSMPE AKDLDARS PRV ++NLFVES SGLTE+
Sbjct: 228 KKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMG-----------------------------------CRGLNEAGQPTMLDVTEILSQKWESFLDQTVIRCWLKATILPGEHESALKDKDTRLDREDPWAAALDDLCDMVEKMSMPECAKDLDARSKPRVWTENLFVESASGLTEE 377
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5KII5_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII5_9PHAE) HSP 1 Score: 236 bits (602), Expect = 4.480e-74 Identity = 121/187 (64.71%), Postives = 139/187 (74.33%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDK--------------EAAALDDLCDMVKKMSMPESAKDLDARSMPRVLSDN 519
+KV L+WDNCPGHKI N+DPQIVIIFLPP VTSVFQPMDMG LF LK YKTEMV+RL+ +IEDWDT RAR I GCRGLSDAGQA MLDV E+L+QKWESFSDQTVVRCWLKA IL EH++ LK +DTRL +D +D LCD+V K+SMP+S DAR +P VL+DN
Sbjct: 187 RKVALIWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGGLFTLKCHYKTEMVVRLSGVIEDWDTVRARNIPTGCRGLSDAGQATMLDVAEVLTQKWESFSDQTVVRCWLKATILSEEHEDVLKRKDTRLAGKDNGKXXXXXXXXXXXXXRGLVDGLCDLVAKLSMPDSVDVTDARKIPGVLTDN 373
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Match: A0A6H5JEK6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK6_9PHAE) HSP 1 Score: 237 bits (604), Expect = 3.760e-72 Identity = 118/161 (73.29%), Postives = 130/161 (80.75%), Query Frame = 1
Query: 1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYKTEMVMRLAALIEDWDTARARKIRRGCRGLSDAGQANMLDVTEILSQKWESFSDQTVVRCWLKAKILPREHQNALKGRDTRLDREDK-EAAALDDLCDMVKKMSMPESAKD 480
KKV LLWDNCPGHKI ++DPQI I+FLPPNV SV+QPMDMGILF LK QY+ E + RLA LIEDWDT RARKI+RGC+G SDAGQA +LDVTEI SQKW SF QTV+RCWLKA ILP EH N KG DTRLDREDK + A +D LCDMV KMSMP S D
Sbjct: 414 KKVALLWDNCPGHKINSNDPQIFIMFLPPNVISVYQPMDMGILFVLKCQYRNEKMARLADLIEDWDTVRARKIQRGCQGFSDAGQATVLDVTEICSQKWRSFDVQTVIRCWLKAGILPTEHCNVPKGMDTRLDREDKGDVAIIDGLCDMVSKMSMPASITD 574 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16410.3636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig16410.3636.1 >prot_E-siliculosus-1a_F_contig16410.3636.1 ID=prot_E-siliculosus-1a_F_contig16410.3636.1|Name=mRNA_E-siliculosus-1a_F_contig16410.3636.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=188bp KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKSQYback to top mRNA from alignment at E-siliculosus-1a_F_contig16410:5..854+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig16410.3636.1 ID=mRNA_E-siliculosus-1a_F_contig16410.3636.1|Name=mRNA_E-siliculosus-1a_F_contig16410.3636.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=850bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16410:5..854+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16410:5..854+ >mRNA_E-siliculosus-1a_F_contig16410.3636.1 ID=mRNA_E-siliculosus-1a_F_contig16410.3636.1|Name=mRNA_E-siliculosus-1a_F_contig16410.3636.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16410:5..854+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |