mRNA_E-siliculosus-1a_F_contig16403.3632.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig16403.3632.1
Unique NamemRNA_E-siliculosus-1a_F_contig16403.3632.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: A0A0F9VR14_9ZZZZ (Proton_antipo_M domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A0F9VR14_9ZZZZ)

HSP 1 Score: 509 bits (1310), Expect = 3.050e-177
Identity = 279/284 (98.24%), Postives = 283/284 (99.65%), Query Frame = 1 
Query:    1 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAED+VLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLF++GPAAGFGFDLLLWGGLITL FGSIGLLASQEPGRMAGYAA+ISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP
Sbjct:   81 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDLVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFSDGPAAGFGFDLLLWGGLITLAFGSIGLLASQEPGRMAGYAAVISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 364
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: UPI00201F2AEC (monovalent cation/H+ antiporter subunit D n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F2AEC)

HSP 1 Score: 479 bits (1234), Expect = 7.700e-166
Identity = 258/284 (90.85%), Postives = 274/284 (96.48%), Query Frame = 1 
Query:    1 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            VLL DRLTAVM+LLTSVLA ASL+F+MTRWSRIGVHFHSLFQFLLMG+NGAFLTNDLFNLFVFFEVMLAASYGLVLHGYN+ RIRAGMQYIVVNLLASFFFLIGVALIYATT TLNMTDLAARL+ L  EDMVLLK+G+VILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVL+RLWLLLF+EGPAAGFGFDLLLWGGL TL FG+IG+LASQEPGRMAGYAA+ISSGTLLAAVGYGQP LIN+ALFYLISSTLAVAAFL+LIELI+RIRTP
Sbjct:   81 VLLADRLTAVMLLLTSVLATASLIFAMTRWSRIGVHFHSLFQFLLMGVNGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNSVRIRAGMQYIVVNLLASFFFLIGVALIYATTSTLNMTDLAARLERLNPEDMVLLKIGVVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLIRLWLLLFSEGPAAGFGFDLLLWGGLATLAFGTIGMLASQEPGRMAGYAAVISSGTLLAAVGYGQPALINVALFYLISSTLAVAAFLMLIELIDRIRTP 364
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: A0A1R4I581_9GAMM (Na(+) H(+) antiporter subunit D n=6 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1R4I581_9GAMM)

HSP 1 Score: 479 bits (1233), Expect = 1.090e-165
Identity = 255/284 (89.79%), Postives = 275/284 (96.83%), Query Frame = 1 
Query:    1 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            VLLVDRLTAVM+LL S+LA ASL+F+M RWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGL+LHGYN+ RIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLA RL +L+ ED++LLK+G+VILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTK+GVYVL+RLWLLLF+EGPAAGFGFDLLLWGGL+TL FG+IG+LASQEPGRMAGYAA+ISSGTLLAAVGYGQP LIN+ALFYLISSTLAVAAFLLLIELIERIRTP
Sbjct:   81 VLLVDRLTAVMLLLASILASASLIFAMIRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLILHGYNSVRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAMRLSMLSPEDLMLLKIGVVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKVGVYVLIRLWLLLFSEGPAAGFGFDLLLWGGLVTLAFGTIGILASQEPGRMAGYAAVISSGTLLAAVGYGQPALINVALFYLISSTLAVAAFLLLIELIERIRTP 364
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: UPI001D0B5FA9 (monovalent cation/H+ antiporter subunit D n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0B5FA9)

HSP 1 Score: 469 bits (1208), Expect = 6.760e-162
Identity = 253/284 (89.08%), Postives = 272/284 (95.77%), Query Frame = 1 
Query:    1 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            VLLVDRLTAVM+LL+SVLA ASL+F+MTRWSRIGVHFHSLFQFL+MGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNT RIRAGMQYIVVNLLASFFFLIGVALIYAT GTLNMTDLA RL+ L  ED+VLLK+G+VILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVL+RLWLLLF+EGPAAGFGFDLLL GGL TL FG+IG+LASQEPGRMAGYAA+ISSGTLLAAVGYG+P LIN+ALFY+ISST+AVAAFLLLIEL+ERIR P
Sbjct:   81 VLLVDRLTAVMLLLSSVLASASLIFAMTRWSRIGVHFHSLFQFLMMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTTRIRAGMQYIVVNLLASFFFLIGVALIYATAGTLNMTDLAGRLEGLNPEDLVLLKIGVVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLIRLWLLLFSEGPAAGFGFDLLLVGGLATLAFGTIGILASQEPGRMAGYAAVISSGTLLAAVGYGEPALINVALFYMISSTIAVAAFLLLIELVERIRVP 364
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: A0A2N7U1V4_9GAMM (Monovalent cation/H+ antiporter subunit D n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7U1V4_9GAMM)

HSP 1 Score: 461 bits (1186), Expect = 1.470e-158
Identity = 249/284 (87.68%), Postives = 267/284 (94.01%), Query Frame = 1 
Query:    1 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            VLL+DRL+AVM+LLTS LALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYN  RIRAGMQYIV+NL+ASFFFLIGVALIYAT GTLNMTDLA R+  L A+++VLLKVG+ ILALAFLTKSAMWPLGFWLPTTY+AASPPVAAMMVLMTKIGVYV+LRLWLL+F+EG AAGFGF  LLWGGL TL FG+IGLLASQEPGRMAGYAA++SSGTLLAAVGYGQP LI  ALFYLISSTLAV+AFLLLIELIERIRTP
Sbjct:   81 VLLIDRLSAVMLLLTSALALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNGVRIRAGMQYIVINLIASFFFLIGVALIYATAGTLNMTDLAVRVSTLEADELVLLKVGVTILALAFLTKSAMWPLGFWLPTTYAAASPPVAAMMVLMTKIGVYVVLRLWLLVFSEGAAAGFGFGALLWGGLATLAFGTIGLLASQEPGRMAGYAAVVSSGTLLAAVGYGQPSLIGAALFYLISSTLAVSAFLLLIELIERIRTP 364
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: UPI001F47FE51 (monovalent cation/H+ antiporter subunit D n=1 Tax=Halomonas zhangzhouensis TaxID=2733481 RepID=UPI001F47FE51)

HSP 1 Score: 450 bits (1158), Expect = 2.490e-154
Identity = 243/284 (85.56%), Postives = 265/284 (93.31%), Query Frame = 1 
Query:    1 VLLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            VLLVDRLTAVM+LL+S LALASLVF+MTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYN+ RIRAGMQYIV+NL+ASFFFLIGVALIYA  GTLNM DLA R+  L A+++VLLK+G+ +LALAFLTKSAMWPLGFWLPTTY+AASPPVAAMMVLMTKIGVYV+LRLWLL+F++G AAGFGFD LLWGGL TL FG+IGLLASQ+ GRMAGYAA+ISSGTLLA VGYGQP LI +ALFYLI STLAVAAFLLLIELIERIRTP
Sbjct:   81 VLLVDRLTAVMLLLSSGLALASLVFAMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNSMRIRAGMQYIVINLVASFFFLIGVALIYAAAGTLNMADLAGRVSGLDADELVLLKLGMTVLALAFLTKSAMWPLGFWLPTTYAAASPPVAAMMVLMTKIGVYVVLRLWLLVFSDGAAAGFGFDALLWGGLATLAFGTIGLLASQDSGRMAGYAAVISSGTLLAVVGYGQPSLIGVALFYLIGSTLAVAAFLLLIELIERIRTP 364
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: A0A4S4AQ64_9RHOO (Monovalent cation/H+ antiporter subunit D n=1 Tax=Azoarcus nasutitermitis TaxID=2565930 RepID=A0A4S4AQ64_9RHOO)

HSP 1 Score: 402 bits (1034), Expect = 1.730e-135
Identity = 210/285 (73.68%), Postives = 249/285 (87.37%), Query Frame = 1 
Query:    4 LLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGP--AAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            L+VDRL A+M+LLT+VLA A+L++S  RWSRIGVHFHSLFQFLLMGINGAFLT+DLFNLFVFFEVMLAASYGL+LHGYN  RIRAG+QYI +NL AS FFLIGVALIYA+ GTLNM DLAAR+  +A  D+VLLK G+ ILALAFL KSAMWPLGFWLPTTYSAASPPVAAM+VLMTK+G Y +LRLWLL+F++G   AAGFG+  LLW G++T+ FG+ G++AS+E GR+AGY AI+SSGTLLA VGYGQP L+   L+YL+ ST+A+AAF+LLIELIERIR+P
Sbjct:   83 LMVDRLAALMLLLTAVLAFAALLYSTQRWSRIGVHFHSLFQFLLMGINGAFLTHDLFNLFVFFEVMLAASYGLLLHGYNATRIRAGLQYITINLAASLFFLIGVALIYASAGTLNMADLAARMPAIAGTDLVLLKAGVAILALAFLVKSAMWPLGFWLPTTYSAASPPVAAMLVLMTKVGAYAILRLWLLVFSDGAGEAAGFGYQALLWAGMVTIVFGAAGMMASEELGRLAGYGAIVSSGTLLAVVGYGQPSLVTAGLYYLLGSTMAMAAFMLLIELIERIRSP 367
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: A0A4S4ANE9_9RHOO (Monovalent cation/H+ antiporter subunit D n=1 Tax=Azoarcus rhizosphaerae TaxID=2565932 RepID=A0A4S4ANE9_9RHOO)

HSP 1 Score: 402 bits (1034), Expect = 2.020e-135
Identity = 209/282 (74.11%), Postives = 247/282 (87.59%), Query Frame = 1 
Query:   13 DRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTE--GPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            DRL A+M+LL +VLALA+LV+S  RWSR+GVHFHSLFQFLLMG+NGAFLT+DLFNLFVFFEVMLAASYGL+LHGYNT RIRAG+QYI VNL AS FFLIG ALIYA+TGTLNM DLA R+  L   D+VLL+VG+ +LA+AFL KSAMWPLGFWLPTTY+AASPPVAAM+VLMTK+G Y +LRLWLLLF++  G AAGFG++ LLWGG+ T+ FG+ GLLAS+ PGR+AGY AI+SSGTLLA VGYGQP L+   L+YL+ ST+A+AAF+LLIELIERIR+P
Sbjct:   86 DRLAALMLLLAAVLALAALVYSAQRWSRVGVHFHSLFQFLLMGVNGAFLTHDLFNLFVFFEVMLAASYGLLLHGYNTTRIRAGLQYIAVNLAASLFFLIGTALIYASTGTLNMADLAVRVPALTGTDVVLLEVGVAVLAIAFLVKSAMWPLGFWLPTTYAAASPPVAAMLVLMTKVGAYAILRLWLLLFSDEAGAAAGFGYEALLWGGMATILFGAAGLLASEVPGRLAGYGAIVSSGTLLAVVGYGQPALVTAGLYYLLGSTMAMAAFMLLIELIERIRSP 367
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: UPI001F2DFD1B (monovalent cation/H+ antiporter subunit D n=1 Tax=Azonexus sp. R2A-61 TaxID=2744443 RepID=UPI001F2DFD1B)

HSP 1 Score: 401 bits (1030), Expect = 5.430e-135
Identity = 212/283 (74.91%), Postives = 247/283 (87.28%), Query Frame = 1 
Query:    4 LLVDRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            LLVDRL+A+++LLT++L+LA LVFS   WSRIGVHFHSLF FLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNT RIRAGMQYI +NL+AS  FLIG+ALIYATTGTLNM DL  R+  LAA+D+ LL+VG VILALAFLTK AMWPLGFWLPTTY+AASPPVAAM+VLMTK+GVY ++R+W L F+ GPAAGFG + L WGG+ T+ FGS+G+LAS+E GR+AGY AIISSGTLLA VGYG P L+ + L+YL+ +TLA+AAFLLL+ L ERIRTP
Sbjct:   83 LLVDRLSALLLLLTALLSLAVLVFSYRGWSRIGVHFHSLFLFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTTRIRAGMQYIAINLVASLLFLIGLALIYATTGTLNMADLGPRVAALAADDLALLQVGTVILALAFLTKGAMWPLGFWLPTTYAAASPPVAAMLVLMTKVGVYAIVRVWPLAFSAGPAAGFGLEALYWGGIATIVFGSLGILASEEAGRVAGYGAIISSGTLLAIVGYGGPALLGVGLYYLLGATLAMAAFLLLVGLTERIRTP 365
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BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Match: A0A4S3FR80_9BURK (Monovalent cation/H+ antiporter subunit D n=1 Tax=Massilia sp. Mn16-1_5 TaxID=2079199 RepID=A0A4S3FR80_9BURK)

HSP 1 Score: 401 bits (1030), Expect = 5.600e-135
Identity = 211/282 (74.82%), Postives = 245/282 (86.88%), Query Frame = 1 
Query:   13 DRLTAVMMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNLFVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYATTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLPTTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTE--GPAAGFGFDLLLWGGLITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFYLISSTLAVAAFLLLIELIERIRTP 852
            DRL A+M+LLT+VLALASL F+M RWSRIGVHFHSLFQFLLMGINGAFLT+DLFNLFVFFEVMLAASYGLVLHGYN  R+RA MQYI VNL A+  FLIG ALIYA+TGTLNM DLA R+  +A E++ LLKVG+ +LALAFL KSAMWPLGFWLPTTY+AASPPVAAM+VLMTK+G YV+LRLWLLLF +  G AAGFG+D L+WGG+ T+ FG+ G+L++   GRMAGY+A++SSGTLLA +GYGQP L+   L+YLI STLAVAAFLLLIELI+RIRTP
Sbjct:   82 DRLAALMLLLTAVLALASLHFAMKRWSRIGVHFHSLFQFLLMGINGAFLTHDLFNLFVFFEVMLAASYGLVLHGYNAERLRASMQYIAVNLAAALLFLIGTALIYASTGTLNMADLAVRISAIAPENIGLLKVGVAVLALAFLVKSAMWPLGFWLPTTYAAASPPVAAMLVLMTKVGAYVILRLWLLLFGDEAGAAAGFGYDALVWGGMATIVFGAAGMLSTDTAGRMAGYSAVVSSGTLLAVIGYGQPSLVTAGLYYLIGSTLAVAAFLLLIELIDRIRTP 363
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16403.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9VR14_9ZZZZ3.050e-17798.24Proton_antipo_M domain-containing protein n=4 Tax=... [more]
UPI00201F2AEC7.700e-16690.85monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
A0A1R4I581_9GAMM1.090e-16589.79Na(+) H(+) antiporter subunit D n=6 Tax=unclassifi... [more]
UPI001D0B5FA96.760e-16289.08monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
A0A2N7U1V4_9GAMM1.470e-15887.68Monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
UPI001F47FE512.490e-15485.56monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
A0A4S4AQ64_9RHOO1.730e-13573.68Monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
A0A4S4ANE9_9RHOO2.020e-13574.11Monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
UPI001F2DFD1B5.430e-13574.91monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]
A0A4S3FR80_9BURK5.600e-13574.82Monovalent cation/H+ antiporter subunit D n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig16403contigE-siliculosus-1a_F_contig16403:3..854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size822
Model size852
Exons1
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelOxalobacteraceae
COG Functional cat.CP
EggNOG OGs1MURB@1224,2VH1Y@28216,473M5@75682,COG0651@1,COG0651@2
EggNOG free text desc.Proton-conducting membrane transporter
KEGG TC2.A.63.1,2.A.63.2
KEGG koko:K05561,ko:K05568
Preferred namephaD
Seed eggNOG ortholog204773.HEAR3010
Seed ortholog evalue7.2e-107
Seed ortholog score393.7
Taxonomic scopeBacteria
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928149.9111576-UTR-E-siliculosus-1a_F_contig16403:2..321622928149.9111576-UTR-E-siliculosus-1a_F_contig16403:2..32Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig16403 3..32 +
1696318824.5245898-UTR-E-siliculosus-1a_F_contig16403:2..321696318824.5245898-UTR-E-siliculosus-1a_F_contig16403:2..32Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig16403 3..32 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928149.9268475-CDS-E-siliculosus-1a_F_contig16403:32..8541622928149.9268475-CDS-E-siliculosus-1a_F_contig16403:32..854Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16403 33..854 +
1696318824.543952-CDS-E-siliculosus-1a_F_contig16403:32..8541696318824.543952-CDS-E-siliculosus-1a_F_contig16403:32..854Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16403 33..854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig16403.3632.1prot_E-siliculosus-1a_F_contig16403.3632.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig16403 33..854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig16403.3632.1

>prot_E-siliculosus-1a_F_contig16403.3632.1 ID=prot_E-siliculosus-1a_F_contig16403.3632.1|Name=mRNA_E-siliculosus-1a_F_contig16403.3632.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=274bp
MMLLTSVLALASLVFSMTRWSRIGVHFHSLFQFLLMGINGAFLTNDLFNL
FVFFEVMLAASYGLVLHGYNTRRIRAGMQYIVVNLLASFFFLIGVALIYA
TTGTLNMTDLAARLDLLAAEDMVLLKVGIVILALAFLTKSAMWPLGFWLP
TTYSAASPPVAAMMVLMTKIGVYVLLRLWLLLFTEGPAAGFGFDLLLWGG
LITLTFGSIGLLASQEPGRMAGYAAIISSGTLLAAVGYGQPELINIALFY
LISSTLAVAAFLLLIELIERIRTP
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mRNA from alignment at E-siliculosus-1a_F_contig16403:3..854+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig16403.3632.1 ID=mRNA_E-siliculosus-1a_F_contig16403.3632.1|Name=mRNA_E-siliculosus-1a_F_contig16403.3632.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=852bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16403:3..854+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGCTGTTAGTGGATAGGCTCACTGCCGTGATGATGCTTCTCACATCAGT
GTTGGCGCTCGCTTCGTTAGTGTTTTCGATGACCCGCTGGAGCCGTATTG
GCGTTCACTTTCATTCGCTGTTCCAGTTTCTATTAATGGGAATTAACGGC
GCTTTTCTGACCAATGACCTGTTCAATCTATTCGTCTTCTTCGAGGTGAT
GCTGGCAGCCTCTTATGGACTGGTACTGCACGGCTACAATACACGACGCA
TTCGCGCAGGCATGCAATACATTGTGGTCAACCTACTGGCATCGTTTTTC
TTTTTGATTGGCGTGGCGCTGATTTACGCGACGACCGGCACCTTGAATAT
GACCGACCTGGCAGCGCGCCTGGATCTGTTGGCAGCAGAGGACATGGTGC
TGCTAAAAGTGGGTATCGTCATTTTAGCGCTAGCGTTTTTGACTAAAAGT
GCCATGTGGCCGCTTGGATTCTGGCTACCGACGACCTATTCCGCCGCATC
GCCCCCGGTGGCAGCGATGATGGTGCTGATGACCAAGATCGGGGTGTATG
TGTTGCTACGGCTCTGGCTGCTGCTGTTTACGGAGGGTCCGGCAGCAGGG
TTTGGATTCGACTTGTTATTATGGGGCGGGCTTATCACTCTGACGTTTGG
CAGCATCGGCCTGCTGGCCAGCCAAGAGCCAGGGCGCATGGCCGGATATG
CAGCGATCATCTCTTCCGGCACCCTGCTGGCAGCAGTGGGCTATGGGCAG
CCTGAACTAATCAACATTGCGCTCTTTTACCTCATCAGCTCAACCCTGGC
AGTCGCTGCTTTCTTGCTTTTAATTGAGCTGATCGAGCGGATCAGAACAC
CC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16403:3..854+

>mRNA_E-siliculosus-1a_F_contig16403.3632.1 ID=mRNA_E-siliculosus-1a_F_contig16403.3632.1|Name=mRNA_E-siliculosus-1a_F_contig16403.3632.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1644bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16403:3..854+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGCTTCTCACATCAGTGTTGGCGCTCGCTTCGTTAGTGTTTTCGAT
GACCCGCTGGAGCCGTATTGGCGTTCACTTTCATTCGCTGTTCCAGTTTC
TATTAATGGGAATTAACGGCGCTTTTCTGACCAATGACCTGTTCAATCTA
TTCGTCTTCTTCGAGGTGATGCTGGCAGCCTCTTATGGACTGGTACTGCA
CGGCTACAATACACGACGCATTCGCGCAGGCATGCAATACATTGTGGTCA
ACCTACTGGCATCGTTTTTCTTTTTGATTGGCGTGGCGCTGATTTACGCG
ACGACCGGCACCTTGAATATGACCGACCTGGCAGCGCGCCTGGATCTGTT
GGCAGCAGAGGACATGGTGCTGCTAAAAGTGGGTATCGTCATTTTAGCGC
TAGCGTTTTTGACTAAAAGTGCCATGTGGCCGCTTGGATTCTGGCTACCG
ACGACCTATTCCGCCGCATCGCCCCCGGTGGCAGCGATGATGGTGCTGAT
GACCAAGATCGGGGTGTATGTGTTGCTACGGCTCTGGCTGCTGCTGTTTA
CGGAGGGTCCGGCAGCAGGGTTTGGATTCGACTTGTTATTATGGGGCGGG
CTTATCACTCTGACGTTTGGCAGCATCGGCCTGCTGGCCAGCCAAGAGCC
AGGGCGCATGGCCGGATATGCAGCGATCATCTCTTCCGGCACCCTGCTGG
CAGCAGTGGGCTATGGGCAGCCTGAACTAATCAACATTGCGCTCTTTTAC
CTCATCAGCTCAACCCTGGCAGTCGCTGCTTTCTTGCTTTTAATTGAGCT
GATCGAGCGGATCAGAACACCCATGATGCTTCTCACATCAGTGTTGGCGC
TCGCTTCGTTAGTGTTTTCGATGACCCGCTGGAGCCGTATTGGCGTTCAC
TTTCATTCGCTGTTCCAGTTTCTATTAATGGGAATTAACGGCGCTTTTCT
GACCAATGACCTGTTCAATCTATTCGTCTTCTTCGAGGTGATGCTGGCAG
CCTCTTATGGACTGGTACTGCACGGCTACAATACACGACGCATTCGCGCA
GGCATGCAATACATTGTGGTCAACCTACTGGCATCGTTTTTCTTTTTGAT
TGGCGTGGCGCTGATTTACGCGACGACCGGCACCTTGAATATGACCGACC
TGGCAGCGCGCCTGGATCTGTTGGCAGCAGAGGACATGGTGCTGCTAAAA
GTGGGTATCGTCATTTTAGCGCTAGCGTTTTTGACTAAAAGTGCCATGTG
GCCGCTTGGATTCTGGCTACCGACGACCTATTCCGCCGCATCGCCCCCGG
TGGCAGCGATGATGGTGCTGATGACCAAGATCGGGGTGTATGTGTTGCTA
CGGCTCTGGCTGCTGCTGTTTACGGAGGGTCCGGCAGCAGGGTTTGGATT
CGACTTGTTATTATGGGGCGGGCTTATCACTCTGACGTTTGGCAGCATCG
GCCTGCTGGCCAGCCAAGAGCCAGGGCGCATGGCCGGATATGCAGCGATC
ATCTCTTCCGGCACCCTGCTGGCAGCAGTGGGCTATGGGCAGCCTGAACT
AATCAACATTGCGCTCTTTTACCTCATCAGCTCAACCCTGGCAGTCGCTG
CTTTCTTGCTTTTAATTGAGCTGATCGAGCGGATCAGAACACCC
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