mRNA_E-siliculosus-1a_F_contig1633.3606.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: D7FRQ6_ECTSI (Putative methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ6_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 2.030e-163 Identity = 261/390 (66.92%), Postives = 270/390 (69.23%), Query Frame = 1
Query: 103 TRYTIDVDVHPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKR--------------------------------------------RGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAINGAAQTTEGEGDSAADEGGV-------------------------------------------------------------------VPATVAAAAASYAASARAGPLTFVPAVPAATNFEAKYVVVGETVYELRLEPKLS 939
TRYTIDVDVHPD A VAVKHALQLPRFLHHYPISSHTQAAYR+AVDFVL FHRS QEQQQ+SP PV+LDSGCGTGRSS+LLARSYPHLPVIGIDRSAVRLSKGGGDAGKR +GNRDNRLREPLP NLLLLRADLVDLWILASR+NAWEI EHYILYPNPYPKRSQLRSRWHGHS+FPVLLSLGGVITLRSNWRTYLDEVC+AVLAINGAAQTTEGEGDSAADEGG+ VPATVAAAA SYAASARAGPLTFVPAVPAATNFEAKYV VGETVYELRLEPKLS
Sbjct: 2 TRYTIDVDVHPDAASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRVEEHMHQHNSSTRQAGAEQGRNDRVDARRAHGSSGEKNRPPLQKKGNRDNRLREPLPENLLLLRADLVDLWILASRENAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTEGEGDSAADEGGLGDLESKRTSSGGKDGAGEVSGTDAAVASAAVSTKLSATESDDSAETTGGDVSFGIGRALIGDESRAEVPATVAAAAVSYAASARAGPLTFVPAVPAATNFEAKYVAVGETVYELRLEPKLS 391
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: B7GB80_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GB80_PHATC) HSP 1 Score: 184 bits (466), Expect = 2.360e-52 Identity = 133/323 (41.18%), Postives = 168/323 (52.01%), Query Frame = 1
Query: 1 HRFFWSPRRRRTRCVSPEGISFRSMHASPSTAVTTRYTIDVDVHPD---VAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKG-------GGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWE--IIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGV-ITLRSNWRTYLDEVCRAVLAINGAAQTTEGEGDSAADEGGVVPATVAAAAASYAASARAGPLTFVPAVPAATNFEAKYVVVGETVYELRLEP 930
H F SP RRRT + P G+ S S S+ V+TRYTI D + + KH L RFL P+++HT A+R D V +P+ILDSGCGTGRSS+ L R YP V+GIDRS RLSK D G + D L N+ L+RA+LVD W D WE I +H++LYPNPYPK+S+++SR + H FP+LL LGG +T+RSNWRTYLDE AV TT +GD+ + G A Y AS + P + TNFE KY VGE YEL L+P
Sbjct: 18 HGLFLSPWRRRTLSIGPCGLRNVS---SRSSEVSTRYTITSCPPTDTETLRTIVEKHVRSLDRFLQAKPVAAHTLRAFRQVHDAV------------PVDTPIILDSGCGTGRSSLHLGRLYPDAVVLGIDRSVARLSKNPNFQSSVASDDGP---SDDALLVRQAADNVWLVRAELVDFWRCCI-DAGWESSIAQHFVLYPNPYPKKSRIKSRLYAHPGFPLLLRLGGDRLTVRSNWRTYLDEFSAAVHTAAACLSTTPDDGDTRDEVDGKTGVYGKNYAQRYLASTQEEAKLLDPTLIPWTNFEEKYHNVGERTYELVLKP 321
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: A0A8J5XCC6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCC6_DIALT) HSP 1 Score: 162 bits (409), Expect = 3.160e-44 Identity = 109/273 (39.93%), Postives = 147/273 (53.85%), Query Frame = 1
Query: 130 HPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSK-----GGGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAINGAAQTTEGEGD---SAADEGGVVPATVAAAAASYAASARAGPLTFVPAVPAATNFEAKYVVVGETVYELRL 924
H A VA KH L+L FLH+ P HT+A + ++ E H +R + ++LDSGCGTGRS++LLA+ +P VIG+DRS RL K G A RG D +P N LL+RADL W LA ++ W + H +L+PNPYPK + L RWH H +P++L+LGG + LRSNWRTYL+E A AI A + GD + D + P V AAA + AA R + + P + FEAKY ++ L L
Sbjct: 30 HARTAAVACKHVLELDSFLHNAPTPEHTRATFGATAAWLAERHGAR-----RGAGGLLLDSGCGTGRSTLLLAQQHPDCLVIGVDRSLARLRKDKRDISPGAACAPRG--DEGPVQPAFDNALLVRADLPAFWRLAV-ESGWRLRAHRLLFPNPYPKPAHLPRRWHAHPSWPLVLALGGELELRSNWRTYLEETVIATSAIAHLASSDGEAGDLPPPSCDAAALRP-DVRAAARALAAGLRVE--QYAASAPFVSEFEAKYEAARLPLFRLAL 291
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: A0A0B4XNW9_9GAMM (Methyltransferase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XNW9_9GAMM) HSP 1 Score: 159 bits (402), Expect = 5.610e-44 Identity = 90/199 (45.23%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 130 HPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKRRGNRDNRLR-EPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAING 723
H +A V V+H R P+++HT+AA+ A D+ Q + P++LDSGCGTGRSS+ LA YP VIG+D+S RL +G LR +PLP NLLLLRA+ D W LA + W + EH + YPNP+PK + LR RWHGH +FPVLL LGG + LRSNW YL+E+ R LA+ G
Sbjct: 16 HEQLAAVVVRHLAHPWRA----PVAAHTRAAFAEAADW---------RAAQGADRPLVLDSGCGTGRSSVWLAGHYPEALVIGLDQSGERLRRG-------------HLRFDPLPANLLLLRAEAADFWRLAV-EAGWRVREHCLFYPNPWPKSAHLRRRWHGHPVFPVLLQLGGQLRLRSNWPVYLEEM-RLALALAG 186
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: UPI000362CCDA (methyltransferase domain-containing protein n=1 Tax=Kushneria aurantia TaxID=504092 RepID=UPI000362CCDA) HSP 1 Score: 159 bits (403), Expect = 5.780e-44 Identity = 93/210 (44.29%), Postives = 123/210 (58.57%), Query Frame = 1
Query: 112 TIDVDVHPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAINGAAQTTE 741
T DVHPD+AG V+ AL+ P P+++H + A+ A+DF ++ +ILD+GCGTG S+ LA+ YP VIGIDRSA RLS+ AG LP N LLLRADLVD W LA + H++LYPNPYPK SQL+ RWH H +FPVL++LGG + LRSNWR Y++E +A+ + A + E
Sbjct: 10 TAQRDVHPDLAG-RVRRALESPW---QRPLAAHNREAFAQALDFY-----------RRCGGELILDAGCGTGLSTRQLAQRYPEACVIGIDRSAERLSRQADAAGA------------LPGNALLLRADLVDFWRLALAHDLCPA-RHFLLYPNPYPKASQLKRRWHAHPVFPVLMALGGELELRSNWRLYVEEFAQALNQVTALAVSVE 191
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: UPI001679E76A (class I SAM-dependent methyltransferase n=1 Tax=Kushneria pakistanensis TaxID=1508770 RepID=UPI001679E76A) HSP 1 Score: 157 bits (396), Expect = 6.020e-43 Identity = 95/208 (45.67%), Postives = 118/208 (56.73%), Query Frame = 1
Query: 100 TTRYTIDVDVHPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAING 723
T Y+ +HPD+A V+ AL P PI+ HT+AA+ A F Q P+ILD+GCGTGRS+ LAR YP V+GIDRSA RLS+ D + G P N LLRADL+D W LA W+ I H I YPNPYPK SQL+ RWH H +FPVLL+LGG + LRSNW+ Y++E AV + G
Sbjct: 6 TPVYSTQAGLHPDLAH-HVQRALDHPW---QRPIADHTRAAFETAQQFY-----------QAHGGPLILDAGCGTGRSTRQLARYYPKACVLGIDRSADRLSR---DYTRELG--------AFPDNARLLRADLIDFWRLAHAAG-WQPIRHCIFYPNPYPKASQLKKRWHAHPVFPVLLALGGELELRSNWQIYVEEFACAVDLVTG 186
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: A0A3D9DW02_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria indalinina DSM 14324 TaxID=1122140 RepID=A0A3D9DW02_9GAMM) HSP 1 Score: 156 bits (395), Expect = 6.950e-43 Identity = 94/210 (44.76%), Postives = 122/210 (58.10%), Query Frame = 1
Query: 100 TTRYTIDVDVHPDVAGVAVKHAL--QLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAING 723
T ++ +HPD+A V+ AL Q R PI+ HT AA+ A F Q P+ILD+GCGTGRS+ LAR +P V+GIDRSA RLS+ D + G P N LL+RADLVD W LA W+ + H++LYPNPYPK SQL+ RWH H +FPV+++LGGV+TLRSNW+ Y+DE A+ G
Sbjct: 6 TPVHSTQAGLHPDLAH-HVQRALDSQWQR-----PIADHTCAAFETAQQFY-----------QAHGGPLILDAGCGTGRSTRQLARYHPEACVLGIDRSADRLSR---DYTRELG--------AFPDNALLVRADLVDFWRLAY-SAGWQPVRHFLLYPNPYPKASQLKRRWHAHPVFPVVMALGGVLTLRSNWQVYVDEFACAINLATG 186
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: A0A7S2EKG6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKG6_TRICV) HSP 1 Score: 157 bits (398), Expect = 2.240e-42 Identity = 108/284 (38.03%), Postives = 156/284 (54.93%), Query Frame = 1
Query: 103 TRYTIDVDV-----HPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKRRGNRDNRLR--EPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGG-VITLRSNWRTYLDEVCRAVLAINGAAQTTEGEGDSAADEGGVVPATVAAAAASYAASARAGPLTFVPAVPAATNFEAKYVVVGETVYELRLEP 930
T+YTID V ++ V KH L FL + PI+ HT+AA+ D L+ QQ++ ILDSGCGTGRS++LL YP +IG+DRS VRL + + + + D+ LR L +N+LL+RA+L D W + WEI HYILYPNPYPK+++L+ R++ H FP++L+LGG I +RSNW YL E ++V+ + + ++ ++A +Y +A+ GP + + A T FE KY VGE YEL L P
Sbjct: 53 TQYTIDDGVCAPTDEAELRKVVQKHCHTLEVFLENRPIAKHTKAAFLSVKD-ALQNKNDVSVQQRK----FILDSGCGTGRSTLLLGEQYPDHTIIGVDRSFVRLKRNSVE-NEVNESTDDSLRPFHALSSNVLLVRAELTDFW-RCCLEEGWEIDYHYILYPNPYPKKNRLKKRFYAHPSFPLILALGGGKIVIRSNWEGYLKEFAQSVVYASDYYEQSKDRENTAK---------------AYVKNAKDGPHERLDKLVAWTLFEKKYDDVGEKTYELILRP 314
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: A0A7S3PXI0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXI0_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.290e-42 Identity = 105/287 (36.59%), Postives = 150/287 (52.26%), Query Frame = 1
Query: 94 AVTTRYTIDVDVHP-----DVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKG----GGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGV-ITLRSNWRTYLDEVCRAVLAINGAAQTTEGEGDSAADEGGVVPATVAAAAASYAASARAGPLTFVPAVPAATNFEAKYVVVGETVYELRL 924
++ T+YTI+ DV P ++ + KH L RF + PI+ HT AA+ + + + +ILDSGCGTGRS++LL YP +IG+DRS VRL++ GDA + R + + +N+LL+RA+L D W D E+ +HYILYPNPYPK+++++ R++ H FP++L+LGG I +RSNW YL E ++V + + E E A Y A+ GP V A TNFE KY VGE YEL L
Sbjct: 53 SMATQYTINDDVCPPIDEAELRKIVQKHCECLQRFTKNKPIAQHTSAAFDQILPHI------------DTTKKIILDSGCGTGRSTLLLGERYPSHTIIGVDRSFVRLNRNCISKKGDADSDSNENNQRPFQAVSSNVLLVRAELSDFW-RCCLDAKLEVDQHYILYPNPYPKKNRIKKRFYAHPSFPIILNLGGSKIVVRSNWEGYLKEFAKSVEYADELYVSQEMEN----------------LALPYLQDAKVGPKERVDKTVAWTNFEKKYDDVGEKTYELIL 310
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Match: A0A7V7KGH6_9GAMM (Methyltransferase domain-containing protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A7V7KGH6_9GAMM) HSP 1 Score: 155 bits (391), Expect = 3.150e-42 Identity = 92/223 (41.26%), Postives = 123/223 (55.16%), Query Frame = 1
Query: 73 MHASPSTAVTTRYTIDVDVHPDVAGVAVKHALQLPRFLHHYPISSHTQAAYRYAVDFVLEFHRSRQEQQQQSPSPVILDSGCGTGRSSILLARSYPHLPVIGIDRSAVRLSKGGGDAGKRRGNRDNRLREPLPTNLLLLRADLVDLWILASRDNAWEIIEHYILYPNPYPKRSQLRSRWHGHSIFPVLLSLGGVITLRSNWRTYLDEVCRAVLAINGAAQTTE 741
MHA+ T T + + H D+A V+ AL+ P P+++HT+ A+ + + R Q P+ILD+GCG G S+ LA YP VIG+DRSA RLS+ G + N LL+RADLVD W LA + W+ HY+LYPNPYPK ++L+ RWHGH +FPVLL+LGG + LRSNWR YL+E A+ G T E
Sbjct: 1 MHATSRTITTNQ----LGPHKDLAR-RVERALRHPL---RKPVAAHTREAFANCLSW-------RARQDANGARPLILDAGCGVGLSTRRLAERYPDHAVIGVDRSAARLSRDHG---------------AIADNALLVRADLVDFWRLAL-EAGWQPARHYLLYPNPYPKSARLKLRWHGHPVFPVLLALGGRLELRSNWRLYLEEFALALAQATGVTATVE 192 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1633.3606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1633.3606.1 >prot_E-siliculosus-1a_F_contig1633.3606.1 ID=prot_E-siliculosus-1a_F_contig1633.3606.1|Name=mRNA_E-siliculosus-1a_F_contig1633.3606.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=314bp HRFFWSPRRRRTRCVSPEGISFRSMHASPSTAVTTRYTIDVDVHPDVAGVback to top mRNA from alignment at E-siliculosus-1a_F_contig1633:8760..10219+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1633.3606.1 ID=mRNA_E-siliculosus-1a_F_contig1633.3606.1|Name=mRNA_E-siliculosus-1a_F_contig1633.3606.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1460bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1633:8760..10219+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1633:8760..10219+ >mRNA_E-siliculosus-1a_F_contig1633.3606.1 ID=mRNA_E-siliculosus-1a_F_contig1633.3606.1|Name=mRNA_E-siliculosus-1a_F_contig1633.3606.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1884bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1633:8760..10219+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |