mRNA_E-siliculosus-1a_F_contig1618.3540.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A6H5JNM9_9PHAE (TauD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM9_9PHAE) HSP 1 Score: 692 bits (1786), Expect = 1.640e-245 Identity = 349/387 (90.18%), Postives = 360/387 (93.02%), Query Frame = 1
Query: 400 QVDTFQVPNNLQVRNASVASPSSPDDAGGGDGSTATTDRQPHVLRVSWGDVPAGPQDTGDGEEGPNTSTSTSTIPVDWLRRHCTSATARDLRRRHGGPADGPGLLHPRPVLWGADVFS-GTPPQQQPPACLSYEDVMADGALDDPEAAGSSPPP--------APGASPRLVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESFK 1533
QVDTFQVPNNLQVRNASVASPSSPDDA GGDGSTATTDRQ HVLRVSWGD+PAGPQDT DG+EGPNT+T STIP+DWLRRHCTSATARDLRRRHGGPADGPGL HPRPVLWGADVFS GTP QQQPPAC+SYEDVMADGALD+PE APGASPRLVDLIRSHGVALVRGVPTDEKGTE LALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRA+EGGA IYVDGFAVAERLRAT+PEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLG LGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLS+IIRDPSLVARIVLEPGEC+IL+NHRALHGRESFK
Sbjct: 24 QVDTFQVPNNLQVRNASVASPSSPDDARGGDGSTATTDRQAHVLRVSWGDIPAGPQDTRDGKEGPNTNT--STIPIDWLRRHCTSATARDLRRRHGGPADGPGL-HPRPVLWGADVFSAGTPQQQQPPACMSYEDVMADGALDEPEXXXXXXXXXXXXXXXXAPGASPRLVDLIRSHGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAREGGASIYVDGFAVAERLRATSPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGALGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSKIIRDPSLVARIVLEPGECVILNNHRALHGRESFK 407
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: D7FLG7_ECTSI (TauD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG7_ECTSI) HSP 1 Score: 497 bits (1279), Expect = 4.100e-171 Identity = 242/249 (97.19%), Postives = 246/249 (98.80%), Query Frame = 1
Query: 787 LSYEDVMADGALDDPEAAGSSPPPAPGASPRLVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESFK 1533
+SYEDVMADGALDDPEAAGSSPPPAPGASPRLVDLIRSHGVALVRGVPTDEKGTE LALR+GGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGA IYVDGFAVA+RLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYL NEDIDRFYEYHASLSEIIRDPSLVARIVLEPGEC+ILDNHRALHGRESFK
Sbjct: 1 MSYEDVMADGALDDPEAAGSSPPPAPGASPRLVDLIRSHGVALVRGVPTDEKGTEALALRIGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVADRLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLPNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECVILDNHRALHGRESFK 249
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A835ZFJ6_9STRA (TauD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ6_9STRA) HSP 1 Score: 244 bits (623), Expect = 4.540e-73 Identity = 121/214 (56.54%), Postives = 154/214 (71.96%), Query Frame = 1
Query: 889 LIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESF 1530
++R++G+ LV G PT +GTE LA R+G +R TLYG GMWATSAE + EE D+AY+N L HTDC Y+ DPPG+QVFNCV A +GG YVDGFAVA LR +PEAFEFF+RT Y C D+ H +A GPVF LG G+VVQVR+NDYDRAPLD+L DI+ FY++H L+E+IR S + ++ L PG+ +I DNHR +HGRE+F
Sbjct: 3 MLRAYGIVLVTGSPTTMEGTEALATRIG-VVRETLYG-GMWATSAEGA--EEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAF 212
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: D7FLG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG6_ECTSI) HSP 1 Score: 194 bits (492), Expect = 7.060e-56 Identity = 94/98 (95.92%), Postives = 94/98 (95.92%), Query Frame = 1
Query: 109 MLRQAAAKVPPRFSAPKRWATGFVAGDGQPLVEAQDAWRGFVEGGRHGISAAVVVQPGGGVGQRVSVSWADGHKSEFSTKWLRDHAADAFNSHTKQRQ 402
MLRQAAAKVPPRFSAPKRWATGFV GD QPLVEAQDAWR FVEGGRHGISAAVVVQPGGGVGQRV VSWADGHKSEFSTKWLRDHAADAFNSHTKQRQ
Sbjct: 1 MLRQAAAKVPPRFSAPKRWATGFVGGDRQPLVEAQDAWRRFVEGGRHGISAAVVVQPGGGVGQRVGVSWADGHKSEFSTKWLRDHAADAFNSHTKQRQ 98
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A6H5JP06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP06_9PHAE) HSP 1 Score: 191 bits (485), Expect = 7.100e-55 Identity = 93/99 (93.94%), Postives = 93/99 (93.94%), Query Frame = 1
Query: 109 MLRQAAAKVPPRFSAPKRWATGFVAGDGQPLVEAQDAWRGFVEGGRHGISAAVVVQPGGGVGQRVSVSWADGHKSEFSTKWLRDHAADAFNSHTKQRQV 405
MLRQA AK PPRFSAPKRWATG VA DGQPLVEAQDAWR FVEGGRHGISAAVVVQPGGGVGQRVSVSW DGHKSEFSTKWLRDHAADAFNSHTKQRQV
Sbjct: 1 MLRQATAKTPPRFSAPKRWATGVVACDGQPLVEAQDAWRRFVEGGRHGISAAVVVQPGGGVGQRVSVSWVDGHKSEFSTKWLRDHAADAFNSHTKQRQV 99
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A2D4BN78_PYTIN (Trimethyllysine dioxygenase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN78_PYTIN) HSP 1 Score: 191 bits (486), Expect = 6.830e-51 Identity = 92/217 (42.40%), Postives = 138/217 (63.59%), Query Frame = 1
Query: 880 LVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESF 1530
+++ + +G+ +V P+ TE + ++G + T+YG MW T+ + ++ + D+A SN L HTD Y+ DPPG+Q+FNC+V+A EGG YVD + V E+LR P AF+F S+T + YQ FD+ H P+ +L G VVQ R+NDYDRAPL +LS + +D FY +HA L +IIRDP++ R L+ GE +I+DNHR +H R++F
Sbjct: 190 VMEDLHKYGIVMVHSTPSSMDETEKFSRKIG-FVMETIYGK-MWTTNPQTK--DQQYNDTASSNIELLHHTDGTYIRDPPGLQIFNCIVQAGEGGDSRYVDAYHVVEKLRRQFPAAFDFLSKTPLHYQTFDDDAHLTTMEPIIKLDHAGNVVQFRHNDYDRAPLTHLSFDQVDEFYRHHAELLKIIRDPAMEFRHKLQVGEMIIVDNHRVMHARDAF 402
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A8K1C7S5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7S5_PYTOL) HSP 1 Score: 189 bits (480), Expect = 3.100e-50 Identity = 93/219 (42.47%), Postives = 138/219 (63.01%), Query Frame = 1
Query: 874 PRLVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESF 1530
P + DL + +G+ +V P+ TE + ++G + T+YG MW T+ + E+ + D+A +N L HTD Y+ DPPG+Q+FNC+ +A EGG YVD F VAERLR NP AFEFF++T + Y +D H P+ +L G +VQ R+NDYDRAPL +LS E+ + FY+YH L ++RDPS+ R+ L+ G+ +I+DN R +H R++F
Sbjct: 170 PVMEDLYK-YGLVMVHATPSSMDETEKFSRKIG-FVLETIYGT-MWTTNPQTE--EQEYNDTASTNIELLHHTDGTYMRDPPGLQIFNCIAQAGEGGDSRYVDAFHVAERLRRQNPAAFEFFTKTPLHYHHYDRDAHLATMEPIIQLDHAGNIVQFRHNDYDRAPLTHLSFEETELFYKYHGELLSLLRDPSMEFRVKLQVGQMIIVDNQRVMHARDAF 383
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A7S0IRX1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IRX1_9EUKA) HSP 1 Score: 189 bits (479), Expect = 3.550e-50 Identity = 138/420 (32.86%), Postives = 183/420 (43.57%), Query Frame = 1
Query: 301 VSVSWADGHKSEFSTKWLRDHAADAFNSHTKQRQVDTFQVPNNLQVRNASVASPSSPDDAGGGDGSTATTDRQPHVLRVSWGDVPAGPQDTGDGEEGPNTSTSTSTIPVDWLRRHCTSATARDLRRRHGGPADGPGLLHPRPVLWGADVFSGTPPQQQPPACLSYEDVMADGALDDPEAAGSSPPPAPGASPRLVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEAS---AGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGG------AGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGP-LGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESF 1530
V + W D H S F+ WLRDH + + + QR V + + +Q + ++ + G DG T + ++W V + P TS WLR C S AR R G H P++ G F+ C ADG L ++ + + G L+ GVP+ T LA R+G ++ T YG MW T A A E D+AYSND L LHTDC YL PPG+Q+FNC +A G A VDGF V E +R+ P+AF FF R + +Q H A PVF L P G +V RYN+ DRAPLD LS +D+D FY L E + R LE G +++DNHR LHGR F
Sbjct: 19 VVLRWGDSHVSRFANIWLRDHCPQSLHPTSNQRAVPLRALSHAMQPVHLTLGN--------GADGQT---------VELTWPAV-----------QDPTRCEHTSVFASSWLRERCYSDAARSARAARG---------HAAPMIAGTQTFAW----DDVVPCEGDRAQRADGLL------------------ACLEHLDAAGYVLISGVPSTMDATASLAQRLG-VIQETFYGR-MWDTGGSAEDDRAHAEAVTDTAYSNDMLPLHTDCTYLTQPPGLQLFNCAAQAVASGDTPLAGATRLVDGFQVGEAMRSEFPDAFRFFCRAHLPFQHVVGDVHVRATAPVFTLHPHTGAIVAFRYNETDRAPLDVLSADDVDAFYRCVPVLEETVSRFETAVR--LERGNAIVIDNHRTLHGRYGF 375
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A5D6XF28_9STRA (Trimethyllysine dioxygenase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF28_9STRA) HSP 1 Score: 189 bits (481), Expect = 3.660e-50 Identity = 99/220 (45.00%), Postives = 139/220 (63.18%), Query Frame = 1
Query: 871 SPRLVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESF 1530
+P + DL + +G+ +V P+ TE + R+G LR T+YG MW T+ +++ E+ + D+A +N L HTD Y+ DPPG+Q+FNCV +A EGG YVD F AERLRA +P AF F + T ++Y FD H A PV +L G VVQVRYNDYDRAPL +L +++FY +H +L ++RD SL A + L GE +++DN R LHGR +F
Sbjct: 190 APLMTDLYK-YGLVMVTATPSSMAETERFSRRIGFVLR-TIYGE-MWTTNPQSA--EQEYNDTASTNLELLPHTDGTYMRDPPGLQIFNCVAQAGEGGESRYVDAFHAAERLRAQDPAAFRFLAATPVNYHHFDADAHLAAMEPVIKLDHAGHVVQVRYNDYDRAPLTHLPFAAVEQFYRHHRALVRVLRDASLEATLKLRVGEMVVVDNQRVLHGRAAF 404
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Match: A0A3R7J7L5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7L5_9STRA) HSP 1 Score: 187 bits (475), Expect = 2.060e-49 Identity = 133/416 (31.97%), Postives = 187/416 (44.95%), Query Frame = 1
Query: 301 VSVSWADGHKSEFSTKWLRDHAA--DAFNSHTKQRQVDTFQVPNNLQVRNASVASPSSPDDAGGGDGSTATTDRQPHVLRVSWGDVPAGPQDTGDGEEGPNTSTSTSTIPVDWLRRHCTSATARDLRRRHGGPADGPGLLHPRPV---LWGADVFSGTPPQQQPPACL-SYEDVMADGALDDPEAAGSSPPPAPGASPRLVDLIRSHGVALVRGVPTDEKGTEDLALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGAGIYVDGFAVAERLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECMILDNHRALHGRESF 1530
V V++ DG ++F WLRDH + T+QRQ+DT +P + + V + AG + +SW D P T + S WLR H + GP PR LWG D P + C+ + E +M D + ++G+ V G P TE + ++G LR T+YG MW T+ E + D+A +N L HTD Y+ DPPG+Q+FNC+ +A EGG Y+D F V E LR NPEAF S+T + Y D H P+ R+ G VVQ R+NDYDRAPL +LS E++D FY+ H L E++R P + L+ G+ MI+DN R +HGR +F
Sbjct: 43 VRVTFEDGATAKFHKFWLRDHCCCEHCLHPETRQRQLDTASIPLDAPFHHLEVTN------AG-------------EAVTISW-DAPVR-----------GTPCTASEFDAQWLRDHAYALEGGSEADSATGPYP-KSYRQPRLTTKKLWGGDELRL--PSHEYHGCMENIEPLMRD--------------------------LYTYGLVRVTGTPKTMDATEKFSTKIGFVLR-TIYGT-MWTTNPTND--NEDYNDTASTNLELLHHTDGTYILDPPGLQIFNCIAQAGEGGESRYIDSFHVVETLRKENPEAFRVLSQTPLPYFTVDRDAHLSTMEPLIRVDYAGNVVQFRHNDYDRAPLTHLSFEEVDAFYKAHRKLLEVMRRPEMEFCTKLQVGDMMIVDNQRVMHGRHAF 394 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1618.3540.1 >prot_E-siliculosus-1a_F_contig1618.3540.1 ID=prot_E-siliculosus-1a_F_contig1618.3540.1|Name=mRNA_E-siliculosus-1a_F_contig1618.3540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=521bp MLRQAAAKVPPRFSAPKRWATGFVAGDGQPLVEAQDAWRGFVEGGRHGISback to top mRNA from alignment at E-siliculosus-1a_F_contig1618:20257..25436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1618.3540.1 ID=mRNA_E-siliculosus-1a_F_contig1618.3540.1|Name=mRNA_E-siliculosus-1a_F_contig1618.3540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5180bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1618:20257..25436+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1618:20257..25436+ >mRNA_E-siliculosus-1a_F_contig1618.3540.1 ID=mRNA_E-siliculosus-1a_F_contig1618.3540.1|Name=mRNA_E-siliculosus-1a_F_contig1618.3540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3126bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1618:20257..25436+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |