mRNA_E-siliculosus-1a_F_contig1618.3538.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1618.3538.1
Unique NamemRNA_E-siliculosus-1a_F_contig1618.3538.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: A0A6H5KF45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF45_9PHAE)

HSP 1 Score: 689 bits (1778), Expect = 6.040e-245
Identity = 441/499 (88.38%), Postives = 445/499 (89.18%), Query Frame = 1 
Query:    1 MPGRDREITRLRGRLFLVAAAATXXXXXXXXXXAGRWTPGSTGRSXXXXXXXXXTLPSSAELTAAPAVLYAENSRPRRGWGAIPRSLIFGRRRGPERHPGSDDDRSDIAHLRRCFPHDTAGSSCVRFAPVWARARGGAVGKRAVGGKRAPRAGQAQEEDGEAEEARAXXXXXXXXXXXXXXXXXXXXXDVDEAXXAGEGEDAGDAAEEKDPEPSGKEASVMDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAPXXXXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKKQGLMESLSGPMEAMAAKAAAEAXXXXXXXXXXXSEEDKGSPTAGXXXXXXXXXXXXXXGEMPDIEILTNGNESDDVVEEGG 1497
            MP RDRE TR RG+LFLVAAAAT XXXXXXXXX GRWTPGST RS         TLPSSAELTAAPA LYAE SRPRRGWGAIP SLIFGRRRGP RHPGSDDDRSDIAH  RC PHDT GSSCV F PVW RARGGAVGKRAVGGKRAP AGQAQEEDGEA     XXXXXXXXXXXXXXXXXXXXX VDEAXXAGEGEDAGD AEEKDPEPSG+EASVMDTV+LKVVLPQAIKQLAFFLLARWLN SLSP VESQVRAARAIYTVYL+VSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGA   XXXXXXX ASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLV IYLLGREAKGNLARPFKKQGLMESLSG MEAMA KAAAEA XXXXXXX    EEDKGS TA    XXXXXXXXXXXGEMPDIEILTNGNESDDVVEE G
Sbjct:    8 MPRRDRETTRFRGQLFLVAAAATVXXXXXXXXXXGRWTPGSTARSSSSSISSS-TLPSSAELTAAPAALYAEKSRPRRGWGAIPTSLIFGRRRGPVRHPGSDDDRSDIAH-HRCLPHDTTGSSCVMFPPVWVRARGGAVGKRAVGGKRAPPAGQAQEEDGEAXXXXXXXXXXXXXXXXXXXXXXXXXX-VDEAXXAGEGEDAGDEAEEKDPEPSGQEASVMDTVNLKVVLPQAIKQLAFFLLARWLNMSLSPKVESQVRAARAIYTVYLMVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAAATXXXXXXXAASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGSMEAMATKAAAEAQXXXXXXXEARLEEDKGSATA----XXXXXXXXXXXGEMPDIEILTNGNESDDVVEESG 499
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: D7FLG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG4_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 1.720e-148
Identity = 260/280 (92.86%), Postives = 261/280 (93.21%), Query Frame = 1 
Query:  661 MDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAPXXXXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKKQGLMESLSGPMEAMAAKAAAEAXXXXXXXXXXXSEEDKGSPTAGXXXXXXXXXXXXXXG-EMPDIEILTNGNESDDVVEEGG 1497
            MDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKK DD EVEVPPPAQLKKLIQDAGKAGVTGNEGAP   XXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLS LDNPLV IYLLGREAKGNLARPFKKQGLMESLSGPME MA KAAAEA XXXXXXXXXX  EDKGS TAG    XXXXXXXXXXG EMPDIEILTNG+ESDDVVEE G
Sbjct:    1 MDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKGDDTEVEVPPPAQLKKLIQDAGKAGVTGNEGAPAATXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSLLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMETMATKAAAEAQXXXXXXXXXXXXEDKGSATAGVGEEXXXXXXXXXXGGEMPDIEILTNGDESDDVVEESG 280
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: M1V5R0_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V5R0_CYAM1)

HSP 1 Score: 75.1 bits (183), Expect = 1.380e-11
Identity = 48/186 (25.81%), Postives = 82/186 (44.09%), Query Frame = 1 
Query:  700 IKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAPXXXXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKKQ 1257
            I+ +A   +   L   L    E  +  AR  Y  +L+ +  L  ++R L+ KK D   +EVP    LK  +Q+                            P  D  +  R+ V++YD+  +   R + F  + ++ + H + G + P++ Q   G +  LD+PL++I+LLG    G L RPFK +
Sbjct:    5 IRNIALLFVVMHLVNKLDQKDERVILGARTAYATFLLTALLLNAFVRRLVIKKADGRLLEVP----LKPTLQN----------------------------PTPDPNVRQRLTVQEYDISLLDATRSQLFLQTALLVFLHWKMGSVAPLILQAIMGFVRQLDDPLIKIHLLGHRDTGALERPFKSE 158
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: D7FLG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG3_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.350e-8
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = -2 
Query:  193 MSLWPASSAEDQGPRDSAPASSRPRVLCVEHGGR 294
            MSLWPASS EDQGPRDSAPASSRPRVLCVE GGR
Sbjct:    1 MSLWPASSGEDQGPRDSAPASSRPRVLCVERGGR 34
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: F0YP71_AURAN (Uncharacterized protein HYP6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP71_AURAN)

HSP 1 Score: 62.4 bits (150), Expect = 9.900e-8
Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 1 
Query: 1000 GPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPF 1248
            G ++DK+ +    V+ YD+  ++  R  Q  +  +MC+ H+++GM++P++ Q   GV + +  PLV+ +LLGR+    L RPF
Sbjct:   20 GALVDKLTSKETTVRDYDLDMVKKGRNSQLGSLALMCFLHIKKGMVQPLVAQAVMGVAALVKEPLVQAHLLGRD----LERPF 98
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: A0A7S2C1H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1H3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.580e-6
Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 1 
Query:  991 SPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKK--QGLMESLSGPME 1290
            SP+  +   +       K+YDMK ++     QF+  LMM   H +    K ++      +L    + L +I++LGREA G+LARPFK   + +ME +   M+
Sbjct:    2 SPISGIASALSKKPTTAKEYDMKLVKQEISSQFFPMLMMYVLHFKAAWHKAIVLAPVSSLLQLFSSQLFQIHILGREATGDLARPFKSGSEKMMEKMQSAMD 103
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: A0A5C3KM15_9AGAR (Inorganic phosphate transporter n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3KM15_9AGAR)

HSP 1 Score: 56.6 bits (135), Expect = 1.130e-5
Identity = 37/110 (33.64%), Postives = 55/110 (50.00%), Query Frame = 1 
Query:  988 ASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKKQGLMESLSGPMEAMAAKAAAE 1317
            A+P+     K++T+   V+ YD++    + R  +    MM   H      +P+  Q   G+ S  D   V I+LLG+EA G+L RPFK   +  + SGP    AA A AE
Sbjct:   69 AAPMSSDDPKLVTT--TVRDYDLQETSKLLRASYMGLAMMAVMHFYFKFTQPLFVQSLMGLKSLYDAKEVAIHLLGKEATGDLQRPFKVASMFGAASGPQTDAAAIAEAE 176
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: A0A0F7ZHR2_9HYPO (Inorganic phosphate transport protein PHO88 n=4 Tax=Ophiocordycipitaceae TaxID=474942 RepID=A0A0F7ZHR2_9HYPO)

HSP 1 Score: 55.1 bits (131), Expect = 4.320e-5
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 1 
Query: 1015 KMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKK-QGLMESLSG 1281
            K++T+   V  YDM+ ++   R Q     MM + HL      P++ Q    V S L++ LV+IYL G+ A G+L RPFK+ QG M ++ G
Sbjct:   81 KLVTT--TVHAYDMQQLRTAFRGQLMGVAMMGFMHLYMKYTNPLLIQSIIPVKSALESNLVKIYLYGQPATGDLKRPFKQAQGFMSAMQG 168
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BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Match: T5A7W4_OPHSC (Inorganic phosphate transporter Pho88 n=3 Tax=Ophiocordycipitaceae TaxID=474942 RepID=T5A7W4_OPHSC)

HSP 1 Score: 55.1 bits (131), Expect = 4.380e-5
Identity = 50/180 (27.78%), Postives = 80/180 (44.44%), Query Frame = 1 
Query:  784 RAIYTVYLIVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAPXXXXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVRIYLLGREAKGNLARPFKK-QGLMESLSGPMEAMAAKAAAEA 1320
            R +Y    ++  A+ +YI + I KK D   ++   PA +       G A    +EG                     K++T+   V  YD + ++   R Q     MM + HL      P++ Q    V S L++ LV+I++ G  A G+L RPFK+ QG M ++ G  +  + K A EA
Sbjct:   36 RVVYITSNVLIAAVYLYIMFQINKKKDMTTLKYVEPAPM-------GSA----DEG---------------------KLVTT--TVHAYDTQQLRTAFRGQLMGIAMMSFMHLYMKYTNPLLIQSIIPVKSALESNLVKIFIFGHPATGDLKRPFKQAQGFMSAMQGGGQVQSDKKAIEA 181
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1618.3538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KF45_9PHAE6.040e-24588.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLG4_ECTSI1.720e-14892.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
M1V5R0_CYAM11.380e-1125.81Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
D7FLG3_ECTSI3.350e-894.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YP71_AURAN9.900e-833.73Uncharacterized protein HYP6 n=1 Tax=Aureococcus a... [more]
A0A7S2C1H3_9STRA1.580e-631.37Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A5C3KM15_9AGAR1.130e-533.64Inorganic phosphate transporter n=1 Tax=Coprinopsi... [more]
A0A0F7ZHR2_9HYPO4.320e-537.78Inorganic phosphate transport protein PHO88 n=4 Ta... [more]
T5A7W4_OPHSC4.380e-527.78Inorganic phosphate transporter Pho88 n=3 Tax=Ophi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1618contigE-siliculosus-1a_F_contig1618:8398..14705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1500
Model size1588
Exons5
Ec32 orthologEc-17_001270.1
Ec32 ortholog descriptionInorganic phosphate transporter Pho88
Hectar predicted targeting categorychloroplast
BRITEko00000,ko01000,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.P
EC3.1.27.1
EggNOG OGsCOG5065@1,KOG4554@2759
EggNOG free text desc.phosphate ion transport
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0006605,GO:0006807,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006886,GO:0006996,GO:0007029,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010256,GO:0010467,GO:0012505,GO:0015031,GO:0015698,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045048,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0061024,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0098827,GO:1901564
KEGG koko:K01166
Preferred namePHO88
Seed eggNOG ortholog45157.CMM276CT
Seed ortholog evalue2.3e-10
Seed ortholog score73.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1618.3538.1prot_E-siliculosus-1a_F_contig1618.3538.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1618 8398..14617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928132.3107786-CDS-E-siliculosus-1a_F_contig1618:8397..92361622928132.3107786-CDS-E-siliculosus-1a_F_contig1618:8397..9236Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 8398..9236 +
1696318816.8770843-CDS-E-siliculosus-1a_F_contig1618:8397..92361696318816.8770843-CDS-E-siliculosus-1a_F_contig1618:8397..9236Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 8398..9236 +
1622928132.330258-CDS-E-siliculosus-1a_F_contig1618:10971..111311622928132.330258-CDS-E-siliculosus-1a_F_contig1618:10971..11131Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 10972..11131 +
1696318816.887582-CDS-E-siliculosus-1a_F_contig1618:10971..111311696318816.887582-CDS-E-siliculosus-1a_F_contig1618:10971..11131Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 10972..11131 +
1622928132.347875-CDS-E-siliculosus-1a_F_contig1618:11569..117251622928132.347875-CDS-E-siliculosus-1a_F_contig1618:11569..11725Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 11570..11725 +
1696318816.8949926-CDS-E-siliculosus-1a_F_contig1618:11569..117251696318816.8949926-CDS-E-siliculosus-1a_F_contig1618:11569..11725Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 11570..11725 +
1622928132.3643823-CDS-E-siliculosus-1a_F_contig1618:12962..131121622928132.3643823-CDS-E-siliculosus-1a_F_contig1618:12962..13112Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 12963..13112 +
1696318816.902369-CDS-E-siliculosus-1a_F_contig1618:12962..131121696318816.902369-CDS-E-siliculosus-1a_F_contig1618:12962..13112Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 12963..13112 +
1622928132.376306-CDS-E-siliculosus-1a_F_contig1618:14422..146171622928132.376306-CDS-E-siliculosus-1a_F_contig1618:14422..14617Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 14423..14617 +
1696318816.9100194-CDS-E-siliculosus-1a_F_contig1618:14422..146171696318816.9100194-CDS-E-siliculosus-1a_F_contig1618:14422..14617Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1618 14423..14617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928132.3881805-UTR-E-siliculosus-1a_F_contig1618:14617..147051622928132.3881805-UTR-E-siliculosus-1a_F_contig1618:14617..14705Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1618 14618..14705 +
1696318816.9199088-UTR-E-siliculosus-1a_F_contig1618:14617..147051696318816.9199088-UTR-E-siliculosus-1a_F_contig1618:14617..14705Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1618 14618..14705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1618.3538.1

>prot_E-siliculosus-1a_F_contig1618.3538.1 ID=prot_E-siliculosus-1a_F_contig1618.3538.1|Name=mRNA_E-siliculosus-1a_F_contig1618.3538.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=500bp
MPGRDREITRLRGRLFLVAAAATVAAATATATAAGRWTPGSTGRSSSSSS
SSSSTLPSSAELTAAPAVLYAENSRPRRGWGAIPRSLIFGRRRGPERHPG
SDDDRSDIAHLRRCFPHDTAGSSCVRFAPVWARARGGAVGKRAVGGKRAP
RAGQAQEEDGEAEEARAEEDDDAAAAAAAAAAAGVEEDDVDEAAAAGEGE
DAGDAAEEKDPEPSGKEASVMDTVDLKVVLPQAIKQLAFFLLARWLNKSL
SPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKDDDAEVEVPPPAQL
KKLIQDAGKAGVTGNEGAPSATTGGAGGAASPLGPVMDKMMTSRMAVKKY
DMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVR
IYLLGREAKGNLARPFKKQGLMESLSGPMEAMAAKAAAEAQAAEAKATEA
RSEEDKGSPTAGGGEDEEDEEDDDDGGEMPDIEILTNGNESDDVVEEGG*
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mRNA from alignment at E-siliculosus-1a_F_contig1618:8398..14705+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1618.3538.1 ID=mRNA_E-siliculosus-1a_F_contig1618.3538.1|Name=mRNA_E-siliculosus-1a_F_contig1618.3538.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6308bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1618:8398..14705+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGGGAAGGGATCGCGAAATAACGCGGCTTCGGGGTCGATTATTCCT
CGTGGCAGCCGCGGCAACAGTAGCAGCGGCAACGGCAACGGCAACGGCGG
CTGGGAGGTGGACACCTGGAAGCACCGGACGATCATCCAGCAGCAGCAGC
AGCAGCAGCAGCACGCTTCCCAGCTCGGCCGAGCTCACTGCTGCGCCCGC
CGTGCTCTACGCAGAGAACTCTCGGCCGCGACGAGGCTGGGGCGCTATCC
CGAGGTCCCTGATCTTCGGCAGACGACGCGGGCCAGAGAGACATCCCGGT
AGTGATGACGACCGGTCAGATATCGCTCACCTCCGCCGTTGCTTTCCTCA
TGACACTGCCGGGAGTAGTTGCGTGAGGTTCGCGCCAGTGTGGGCGAGAG
CGAGAGGGGGCGCGGTGGGCAAGCGGGCCGTCGGCGGGAAGAGGGCTCCC
CGGGCGGGCCAAGCGCAGGAAGAGGATGGAGAAGCAGAGGAGGCGCGAGC
AGAAGAGGACGACGACGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
GTGTCGAGGAGGATGATGTCGACGAAGCAGCGGCTGCGGGGGAAGGGGAA
GATGCGGGAGATGCAGCAGAGGAGAAGGATCCAGAGCCGTCGGGGAAAGA
AGCCTCCGTGATGGACACGGTGGACCTGAAGGTCGTGCTGCCGCAGGCGA
TAAAGCAGCTGGCGTTCTTCCTGCTGGCGCGGTGGCTCAACAAGAGCCTT
AGCCCCACGGTCGAGTCCCAGGTCAGGGCGGCCCGGGCGATCTACACCGT
GTACCTTATAGTGTCGCAGGCGCTCTGCATGTACATCAGGTGCGGTTCTT
GTGGGGATCCAGGGTACCTCGTCTTGTGTTGGTGGTGGTTGGGTCGTGCT
TGCACGTGAATCTCGTCGCCATCGGCATTGGTAGCTCAATTACCTGGAGG
TGACGTAAGATATCACACCCATTTGGGCCGCTCGCTTTCCGAAGCTCGAT
TTCTGGACACGGCAGCAGCAAGAGTGGCGGGTGTAGCGGCGCCGAAAAAG
TGAAGAATAGATTCGTCGTATGCACACGTGTACTGGAAGTCATTGCTACT
TCTATCATCCTTACATGTACAGCACTAAAATGATAAAAAATGGCGGAGTT
GGAAACATGCATTTTGCAGCATTCATGTCAAGCTCTTTTTTATATGCAAA
TGTCCAGGGTCTGTGATATCTAATGTCACCGACGGTACTACATACAGCAT
ACAGCAGTACGGTCGCATAAAATGTAGGGAGTTTATCGTCGAGCAGGCTT
GTCTACAAAGTACTTCGTATGACTCTATTGCCTATGCTGCCGCTACCGCT
GGTTGCTCGACTGAACTCCAGCGCGCCACTGCTGCTATGCCTACTGCCCC
TTGAACTCTTGGAGGGTCTCCTCCAAGCCCATCTTAAGCAACCCGACTCT
TTATCATGCAACACAAGCTCGTCGGCTTCGACCGTAGCTCGAATGGACTA
CTGCTGTAGGAGATAGGACCCTCAGGCATGTAAACTCATTGCACGCAGGA
CTTCAACACACACCCTTCTGGGTGCCTGCCGTCTTGGGAATGGGTCGTCC
TTCTTGTGTCTTTTATCTCGAGAGGAAGCACATGAGATTTCTGAAAGTTG
ATTACCTTTGGTTTGACATATTTAGTTCATTTTGCTCGTGTGGCGAACGA
GGTATATCGTCACTTCTATTCTCGTCGACGTTAAGCCGCAACAAGAACAT
GGTCGTGATTTGGCGTGTTGATGAATAGTGATGGAAGTTTGGAGAACACC
TTCAAAGGTATAATCTTCCCAACGTCTGTCGAGGACGATTGATTGCCCTA
TTTTCACAGAGGAAACCCTCTTCGCAAGCAAGCAACGCTGTCTGTGTTGC
GTATCTGCACATGGGGACACAGGTTGACACCAAGTTTGCCAGCCATCTTG
TTGCCTGTGACGGGGCCCGAACCACGCGATTATTTCCCCGTACAAACACA
CGTTTTCGACCAGCCGTGATATGTACCGCTGCATAACCCGTAGCCTTACA
GGATTGCTTCTTGTTCGCTCAGTCATTGTGATTTGCTCTTGAAATCTGGC
TCAGTCCGAGGACGTCCGGCGAGGAAGAGGGGGGGGGGGGGGTCATGTGT
CGAAAATCGGCCACGGCGCTCTTCGAAAGAACGAAAAAACAAGCTGTGCC
CTTCTTGTCGTTCTCGAAACATGCGGTGCGCTTATCCGGAGTAGAAATCG
GACAGTTTGGTCACACACACAGCAGTTCTTGGTTATTGTACGGGGCACCG
TGACTTATTTTTTTGCTCATGACCCCCTCCCCCCCCTGCTCGCCGAACGC
CCTCGGGCTGAGCTCGACTTATTATTATCCTTACGGTTCAGGCTGTTTGT
TTACCAATCACAATGCAAGCAAACACAAAGATAGAAAATATTTTCCGAGT
GACTCCGGCGGGTGACCGTAAACTACACACAGTGGTAACACCTGGTGCCC
AGAAGAATGGGACGAAACACAATCTGTCTCTTCATGAGTGCAACGTCCCT
ACGTATTGCCATTTTTTTCGCCAGGTACCTCATCTGGAAGAAAGATGACG
ATGCCGAGGTCGAGGTACCCCCCCCCGCTCAGCTGAAGAAGCTGATTCAG
GATGCCGGGAAGGCTGGTGTAACGGGCAATGAGGGGGCACCCTCGGCGAC
AACGGGTGGGGCCGGGGGTGCTGCTTCGCCACTGGTGTGTGTTTGTGTGT
TGTGTGCTTTTGAGGGGAGAGACATCGAGGGACAAAGAGAGATAGTGAGG
CTGAGGCAGAGAGAGAGAGAGAGGGAGAGAAGGAGAGAGAGAGGTAATGA
CGGAGACAGATTTAGAGAGGGAGGGAGAGGGAGAGAAGGAGAGAGAGATA
ATGAAGCAGAGACAGAGAGGAAAGATACAGAGACAAGAAACTCAGAAAAG
AACGGGGCAGAGAGATAAACAGAGAGACACACATAGAGGAAAGGTGCAAA
GCAGAGGCAGAGGCCGAGAGATCGTACGCGCACTTGCAACTATGCCCGCC
ACGGTTGCTCGGTGTTATTGTAGTTTGTCTCAGCTGTCGAGTCACTCTTT
TGTGTCCCAGGTCGTCGTGCTTTTTCCCGTCACTCAAATCTCTCGTTTGG
TTCGGTGCCTCTCGTCCGCCAGGGACCGGTGATGGACAAGATGATGACAT
CGAGAATGGCGGTGAAGAAGTACGACATGAAGTTCATCCAGGGGGTCCGC
AGGCGGCAGTTTTGGGCGTCCCTGATGATGTGCTACACTCACCTTAGGAG
GGGGATGATCAAGCCCATGATGTTCCAGGTGAGAGCAGCCTCTTGGATGG
ATGTGCCTCTTTTTTTTGTGTGCCTGCTGCCGACGGCAGTAACCATCTAC
CGAAAGAGGCCGAGAAATGGCACCTGTCCTAGACCGATTTTCAAGGCTCG
ACTACTCCACGACCAAGATTGCCTGTACCGTATCGTATACCATACCGTGG
TACCTATTCCGAAAGAGGCGGAGAGATGGTACCACCCCCTGGACCGACGT
TCAAAGCTCGATTGCTACACAACCAAGGGGGCGCGGGAAGAGCCCGATAC
TCACACGGAAAGCCCTTCACCAGATGGTTCCCAGCTCCACCATTGTTGGT
GTTGGCACAAGCTTGGTTGAGGAGCTGTCGAGCCTTGAAAATCGGTCTAG
GGGGGGATGCCATCTCTCCGCCTCTTACGGAATACCACGATACGGTATAC
GGTACGGTAAAGACAATGTTGGTCGTGGAGTGATCGATCCTTGAAAATCG
GTCTAGGGGGGGATGCCATCTCTCCGCCTCTTACGGAATACCCGATACGG
TATACGGTACGGTACAGACAATCTTGGTTGTGGAGTAATCGAGCTTTGGA
AGTCGGTCTAGGGGGGGGTGCCATCTCTCCGCCTCTTACGGAATACCACG
ATACGGTATACGGTACGGTAATAGACAACCTTGGTCGTGGAGTAATCGAG
CTTTCAAAATCGGTCTAGGGGGGATGCCATCTCTCCGGCTCTTAGGGCCA
CCTCCTTGATGTGCCTTTTTTGTGTGCCTACTGCCTACAGCAGTAGCCTC
ATCCTATCTATCCTATTAATCACTTTCCCGCCTTCGCAGCCCACATCCTG
TTCCCCGATATAGCTACCGTCTTCTCCTGGATAGGCGCGGGGGGTTGACA
TGGGCCTAGTCGCAGTAGTAGCACCTCGGCTGGCGTTTGGACGGGCTGCT
ACTGTTCGTAGAAAGCAAGACGTATAGTATAGTAGTGTTTTGATCCGATG
ACCGGTTGGTGCACGGGTCGAACCCCCCTTGGCCGCACAACCGTCGAAAC
TGTCAAGGTTCGTCGCAAGCCTATCTGCGCAGCACCCCCGACAGCAAGCG
TACGTTCGTCCTCCAGATAGATGGGTTTCTCAGAAGGGTTGTTTTGGGTT
TCATCGCGATCAGGGATTATTTTTGTTGGATTTGCTGTACGTTTCACAAC
TTCTTCGGTGATGCACACTCACGAAGTCTTCTGTGTCGGTGCACCCGCCC
TCCCTTTCCCTTAAGGTGTCCTTCGGGGTATTGTCGTTCTTGGATAACCC
GCTCGTCCGCATCTACCTTCTGGGCCGGGAAGCCAAGGGCAACCTCGCGA
GGCCGTTCAAGAAGCAGGGGCTGATGGAGAGCCTGAGCGGGCCGATGGAA
GCCATGGCTGCTAAGGTGCGACATGATCTAACATGCGATGCCACGCAATT
CGACAGAGACCGACAGGGCGGGGGGGGGGTACTCATAGTCGGGGGGGGGG
GGGGGGGGGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACC
TCGCATCCCTACAAAGCCGGGACGGAGCACCACGCCGGGTTCTCACCGGA
CCAGGCTCTCACATCACCAAGCGCGAAGCGCCGCGAGGTATTCGGCGAGT
CGCATGAAGGGTGCGCTGCATCCTGCTAAGGGTGTTCGGCATCTTGTGCT
TACTTCCTTGCGTACAAATGGCAGCTGCGTATGGCTTTATTTATTTTCTG
GTGCTTTCACTCCCAGAGACAGTTGTAAGCACGGTGTAACTGCCTCGAGG
GTGCTTGGCCAATTTAACACAACGTGGTGCGATTATCCCCTTTGCGCGGA
GTGAGGGTTCTCGACTCCGCACAAGATAATCTACTCGACCACCATTCATG
GTTACCTCAAAGAAAAAAACAAACGTAAAAAAAAAAAGCGGTAACCTGGT
CGCCGAGCTCACGAAGTGATCGGCTTGTTTTACAACATCGCTGCCAAGCG
ACGAAAACCCAACCCCGATGGCAAACACCGGGGGCGGCGGCTTGTTTTAC
AACATCGTTGCCAAGCGACGAAAACCCAACCCCGATGGCAAACACTGGGT
GCGGGGGGGGTAGAATAGTTATACCTTTTTGCGTGGCGGCCAGTCTCGCA
GTGCTTGTTAACGACGTGACTCGTAGCGTGGCGGTTTCGAGGAACGCCTA
TACACCTGCGACCACGGCCCCGAGGATTTTTGAGTTTTTAACACTAGAGT
GGCCAGCATGTCATATTTCTACGACACACAAAGGTCGGAATCCAACGTCG
ACTCGCACGAACTGTCTGAGCTCTGCCATGTCCAAAGCATCCGAGCGTGT
GTTCAAGTGGCAGAACGCGCTTGGCTTGAAATCGAAAAGCCCTAAATATA
CACGGCGTGTGGAGTTTGTCTTGTAAATATACTTTATGGCAGACGGATTT
GCCTTCGTTTGCGAACCGTGGTTGACACGGCTTTTGAGAAGACCGGTCGC
GGTACGTATACCCCGAAATACCGTCTTGCAGTTTTCGAAGATGGGATCGA
AGCGTGCCCAAAATACCGTGACCGTTTTCGAAATGGAACGGACGCGACCC
CAAATCTACAACCGCGGTTTTCGAAGGTGGAACGGAAGCGCGCGCGTTTC
TTGTGGTTTGGTCGTCCGGGTTCTGACGTTTCGGCCATTGCTGTCGTGTG
CACGCGTGATGTACACTCTACATAGGCGGCGGCTGAGGCGCAAGCGGCAG
AGGCGAAAGCTACAGAGGCGAGATCAGAGGAAGACAAGGGCAGCCCTACC
GCCGGGGGTGGCGAGGATGAGGAGGATGAGGAGGATGATGATGACGGGGG
AGAGATGCCAGACATCGAGATTTTGACCAATGGCAACGAGAGCGACGACG
TTGTGGAAGAGGGCGGTTGACGATTACACGGTGAAAAGAGGATGCTCTCT
CTCTCTCTCGTCAACACAGCACAAAAACCACGATCGGTGTAGAGGTAGCT
GCGGGAGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1618:8398..14705+

>mRNA_E-siliculosus-1a_F_contig1618.3538.1 ID=mRNA_E-siliculosus-1a_F_contig1618.3538.1|Name=mRNA_E-siliculosus-1a_F_contig1618.3538.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3000bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1618:8398..14705+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGGGAAGGGATCGCGAAATAACGCGGCTTCGGGGTCGATTATTCCT
CGTGGCAGCCGCGGCAACAGTAGCAGCGGCAACGGCAACGGCAACGGCGG
CTGGGAGGTGGACACCTGGAAGCACCGGACGATCATCCAGCAGCAGCAGC
AGCAGCAGCAGCACGCTTCCCAGCTCGGCCGAGCTCACTGCTGCGCCCGC
CGTGCTCTACGCAGAGAACTCTCGGCCGCGACGAGGCTGGGGCGCTATCC
CGAGGTCCCTGATCTTCGGCAGACGACGCGGGCCAGAGAGACATCCCGGT
AGTGATGACGACCGGTCAGATATCGCTCACCTCCGCCGTTGCTTTCCTCA
TGACACTGCCGGGAGTAGTTGCGTGAGGTTCGCGCCAGTGTGGGCGAGAG
CGAGAGGGGGCGCGGTGGGCAAGCGGGCCGTCGGCGGGAAGAGGGCTCCC
CGGGCGGGCCAAGCGCAGGAAGAGGATGGAGAAGCAGAGGAGGCGCGAGC
AGAAGAGGACGACGACGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
GTGTCGAGGAGGATGATGTCGACGAAGCAGCGGCTGCGGGGGAAGGGGAA
GATGCGGGAGATGCAGCAGAGGAGAAGGATCCAGAGCCGTCGGGGAAAGA
AGCCTCCGTGATGGACACGGTGGACCTGAAGGTCGTGCTGCCGCAGGCGA
TAAAGCAGCTGGCGTTCTTCCTGCTGGCGCGGTGGCTCAACAAGAGCCTT
AGCCCCACGGTCGAGTCCCAGGTCAGGGCGGCCCGGGCGATCTACACCGT
GTACCTTATAGTGTCGCAGGCGCTCTGCATGTACATCAGATGCCGGGAAG
GGATCGCGAAATAACGCGGCTTCGGGGTCGATTATTCCTCGTGGCAGCCG
CGGCAACAGTAGCAGCGGCAACGGCAACGGCAACGGCGGCTGGGAGGTGG
ACACCTGGAAGCACCGGACGATCATCCAGCAGCAGCAGCAGCAGCAGCAG
CACGCTTCCCAGCTCGGCCGAGCTCACTGCTGCGCCCGCCGTGCTCTACG
CAGAGAACTCTCGGCCGCGACGAGGCTGGGGCGCTATCCCGAGGTCCCTG
ATCTTCGGCAGACGACGCGGGCCAGAGAGACATCCCGGTAGTGATGACGA
CCGGTCAGATATCGCTCACCTCCGCCGTTGCTTTCCTCATGACACTGCCG
GGAGTAGTTGCGTGAGGTTCGCGCCAGTGTGGGCGAGAGCGAGAGGGGGC
GCGGTGGGCAAGCGGGCCGTCGGCGGGAAGAGGGCTCCCCGGGCGGGCCA
AGCGCAGGAAGAGGATGGAGAAGCAGAGGAGGCGCGAGCAGAAGAGGACG
ACGACGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGTCGAGGAG
GATGATGTCGACGAAGCAGCGGCTGCGGGGGAAGGGGAAGATGCGGGAGA
TGCAGCAGAGGAGAAGGATCCAGAGCCGTCGGGGAAAGAAGCCTCCGTGA
TGGACACGGTGGACCTGAAGGTCGTGCTGCCGCAGGCGATAAAGCAGCTG
GCGTTCTTCCTGCTGGCGCGGTGGCTCAACAAGAGCCTTAGCCCCACGGT
CGAGTCCCAGGTCAGGGCGGCCCGGGCGATCTACACCGTGTACCTTATAG
TGTCGCAGGCGCTCTGCATGTACATCAGGTACCTCATCTGGAAGAAAGAT
GACGATGCCGAGGTCGAGGTACCCCCCCCCGCTCAGCTGAAGAAGCTGAT
TCAGGATGCCGGGAAGGCTGGTGTAACGGGCAATGAGGGGGCACCCTCGG
CGACAACGGGTGGGGCCGGGGGTGCTGCTTCGCCACTGGTACCTCATCTG
GAAGAAAGATGACGATGCCGAGGTCGAGGTACCCCCCCCCGCTCAGCTGA
AGAAGCTGATTCAGGATGCCGGGAAGGCTGGTGTAACGGGCAATGAGGGG
GCACCCTCGGCGACAACGGGTGGGGCCGGGGGTGCTGCTTCGCCACTGGG
ACCGGTGATGGACAAGATGATGACATCGAGAATGGCGGTGAAGAAGTACG
ACATGAAGTTCATCCAGGGGGTCCGCAGGCGGCAGTTTTGGGCGTCCCTG
ATGATGTGCTACACTCACCTTAGGAGGGGGATGATCAAGCCCATGATGTT
CCAGGGACCGGTGATGGACAAGATGATGACATCGAGAATGGCGGTGAAGA
AGTACGACATGAAGTTCATCCAGGGGGTCCGCAGGCGGCAGTTTTGGGCG
TCCCTGATGATGTGCTACACTCACCTTAGGAGGGGGATGATCAAGCCCAT
GATGTTCCAGGTGTCCTTCGGGGTATTGTCGTTCTTGGATAACCCGCTCG
TCCGCATCTACCTTCTGGGCCGGGAAGCCAAGGGCAACCTCGCGAGGCCG
TTCAAGAAGCAGGGGCTGATGGAGAGCCTGAGCGGGCCGATGGAAGCCAT
GGCTGCTAAGGTGTCCTTCGGGGTATTGTCGTTCTTGGATAACCCGCTCG
TCCGCATCTACCTTCTGGGCCGGGAAGCCAAGGGCAACCTCGCGAGGCCG
TTCAAGAAGCAGGGGCTGATGGAGAGCCTGAGCGGGCCGATGGAAGCCAT
GGCTGCTAAGGCGGCGGCTGAGGCGCAAGCGGCAGAGGCGAAAGCTACAG
AGGCGAGATCAGAGGAAGACAAGGGCAGCCCTACCGCCGGGGGTGGCGAG
GATGAGGAGGATGAGGAGGATGATGATGACGGGGGAGAGATGCCAGACAT
CGAGATTTTGACCAATGGCAACGAGAGCGACGACGTTGTGGAAGAGGGCG
GTTGAGCGGCGGCTGAGGCGCAAGCGGCAGAGGCGAAAGCTACAGAGGCG
AGATCAGAGGAAGACAAGGGCAGCCCTACCGCCGGGGGTGGCGAGGATGA
GGAGGATGAGGAGGATGATGATGACGGGGGAGAGATGCCAGACATCGAGA
TTTTGACCAATGGCAACGAGAGCGACGACGTTGTGGAAGAGGGCGGTTGA
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