mRNA_E-siliculosus-1a_F_contig16166.3532.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig16166.3532.1
Unique NamemRNA_E-siliculosus-1a_F_contig16166.3532.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: A0A5S3PU37_9FLAO (ABC-2 transporter permease n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PU37_9FLAO)

HSP 1 Score: 458 bits (1178), Expect = 6.440e-159
Identity = 238/291 (81.79%), Postives = 265/291 (91.07%), Query Frame = 1
Query:    4 STTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            +T+E  A  LV KGD+QLAIVIP+NLS DL++KV+ENV  ++AKFG+E DSI   KT ++ KEVRLYFDPATQY FKSSIK+GIDQMIAKVETQSIY+AFQ+Q+ +DPSE IFDTESFI+FKEI PE    A+IPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVL GKT+VYL VSL+QFGLMLLIGVY FP+IGLPKLD++GK+ +LF+VAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP
Sbjct:   83 NTSETEAAALVNKGDFQLAIVIPENLSKDLDKKVNENVTGMLAKFGLEEDSIVPLKTILSPKEVRLYFDPATQYTFKSSIKNGIDQMIAKVETQSIYKAFQQQVTDDPSEVIFDTESFITFKEIGPEDREKAVIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLAGKTLVYLCVSLLQFGLMLLIGVYLFPNIGLPKLDVAGKVPMLFVVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: A0A831QJS7_9FLAO (ABC transporter permease n=2 Tax=root TaxID=1 RepID=A0A831QJS7_9FLAO)

HSP 1 Score: 427 bits (1099), Expect = 6.440e-147
Identity = 217/292 (74.32%), Postives = 252/292 (86.30%), Query Frame = 1
Query:    1 LSTTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            L +TEA+AK L+ KGDYQL IVIP+NLS DL  KV ENV  I+ KFG E DS+   K+++  KE++LYFDPATQ+AF++SIKSGIDQM++K+ETQ+IY+AFQE+L  DPSE  FDTE F+ FKEIVP      +IPN+TQHNIPAW+LFAIFFIILPLSINMVKEKNQGTFVRLRT P+SYAT LGGKTIV+LGV+L+QF LMLL+GVY FP IGLPKLD+SGK+ +LF+VA FAGLAA+GLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMP FMQ LS +SP
Sbjct:   82 LQSTEAAAKALIQKGDYQLGIVIPENLSKDLNSKVAENVEGILEKFGDEEDSLPLVKSKLKPKEIKLYFDPATQFAFRNSIKSGIDQMVSKIETQTIYKAFQEELMTDPSENFFDTEPFLIFKEIVPTEGKKTIIPNATQHNIPAWSLFAIFFIILPLSINMVKEKNQGTFVRLRTQPMSYATFLGGKTIVFLGVALVQFALMLLVGVYLFPLIGLPKLDVSGKLPMLFIVALFAGLAAVGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPKFMQVLSNISP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: A0A7K0E758_9FLAO (ABC transporter permease subunit n=1 Tax=Kriegella sp. EG-1 TaxID=2664451 RepID=A0A7K0E758_9FLAO)

HSP 1 Score: 426 bits (1096), Expect = 1.840e-146
Identity = 210/288 (72.92%), Postives = 257/288 (89.24%), Query Frame = 1
Query:   13 EASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            E  A++ +  G YQLAI+IP+NL+ DL  K+ ENVA I+AKFG++ + + Q+K+EI  KEV+LYFDPATQ++F++SIKSGI+QM++K+ET++IY+AFQE++ +DP E+IFDTESFISFKEI+P    +A+IPNSTQHNIPAW+LFAIFFIILPLSINMVKEKNQGTFVRLRT+P+SYATVLGGK +V+L VSLIQF LMLL+G+Y FP IGLP+LD+SG++ LLF+VAFFAGLAA+GLGLLLGTIAKSQEQSAPFGATFVVILAA+GGVWVPVFAMP  MQTLS LSP
Sbjct:   86 ENEAQKQIQNGKYQLAIIIPENLTSDLNLKISENVAGILAKFGVDEEEVPQEKSEINSKEVKLYFDPATQFSFRNSIKSGINQMVSKIETKTIYKAFQEEISDDPLEEIFDTESFISFKEIIPNSGKEAMIPNSTQHNIPAWSLFAIFFIILPLSINMVKEKNQGTFVRLRTHPVSYATVLGGKAVVFLVVSLIQFALMLLVGIYLFPLIGLPQLDVSGRLPLLFVVAFFAGLAAVGLGLLLGTIAKSQEQSAPFGATFVVILAAIGGVWVPVFAMPKLMQTLSNLSP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: A0A1G6WAL5_9FLAO (ABC-2 type transport system permease protein n=1 Tax=Pricia antarctica TaxID=641691 RepID=A0A1G6WAL5_9FLAO)

HSP 1 Score: 424 bits (1090), Expect = 1.500e-145
Identity = 215/292 (73.63%), Postives = 251/292 (85.96%), Query Frame = 1
Query:    1 LSTTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            +  +EAS KELV  G YQL IVIP+NLS DL  KV ENV  I+ KFG E + I   K+++  KE++LYFDPATQ+AF++SIKSGIDQM++K+ETQ+IY+AFQE+L ++PSE IFDTE F+ FKEIVP     A+IPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRT+P+SYAT LGGKT+V+L V+L+QF LMLL+G+Y FP IGLPKLD+SGK+ LLF VAFF GLAA+GLGLLLGTIAK+QEQSAPFGATFVVILAALGGVWVPVFAMP FMQ LSK+SP
Sbjct:   82 MQASEASVKELVQTGTYQLGIVIPENLSKDLNLKVAENVEGILEKFGAEEERIPLVKSKLEPKEIKLYFDPATQFAFRNSIKSGIDQMVSKIETQTIYKAFQEELTDNPSEDIFDTEPFLLFKEIVPSDGEKAIIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTHPVSYATFLGGKTLVFLAVALVQFALMLLVGIYLFPLIGLPKLDVSGKLHLLFFVAFFVGLAAVGLGLLLGTIAKTQEQSAPFGATFVVILAALGGVWVPVFAMPKFMQVLSKISP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: G0LBJ2_ZOBGA (ABC-2 type exporter, permease component n=14 Tax=Zobellia TaxID=112040 RepID=G0LBJ2_ZOBGA)

HSP 1 Score: 423 bits (1087), Expect = 4.270e-145
Identity = 212/292 (72.60%), Postives = 255/292 (87.33%), Query Frame = 1
Query:    1 LSTTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            ++ T+  AK  V KGDYQLAIVIP+NLS +LE K++ENV  I++KF    +SI + K+    KEV+LYFDPATQ +FKSS++S ID+MI+K+ET++IY+AFQEQL +DPSE+IF+TE FI+F EIVP    +ALIPNSTQHNIPAWTLFAIFFIILPL+INMVKEKNQGTFVRLRTNP+SYATVLGGKTIV++GVSL+QF LML +G++ FP IGLPKLD+SG++ LLF+VAFFAGLAA+GLGLLLGT+AK+QEQSAPFGATFVVILAA+GGVWVPVFAMP FMQ LS LSP
Sbjct:   82 MAATDEEAKAQVLKGDYQLAIVIPENLSSELEVKINENVDGILSKFSDNEESIPEPKSIAKSKEVKLYFDPATQQSFKSSVRSNIDKMISKIETETIYKAFQEQLTDDPSEEIFETEQFITFTEIVPSKHKEALIPNSTQHNIPAWTLFAIFFIILPLAINMVKEKNQGTFVRLRTNPVSYATVLGGKTIVFVGVSLVQFALMLAVGIFLFPLIGLPKLDVSGRLPLLFVVAFFAGLAAVGLGLLLGTVAKTQEQSAPFGATFVVILAAIGGVWVPVFAMPKFMQLLSNLSP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: UPI00193ADC64 (ABC transporter permease n=1 Tax=Aurantibacter crassamenti TaxID=1837375 RepID=UPI00193ADC64)

HSP 1 Score: 420 bits (1080), Expect = 4.940e-144
Identity = 208/290 (71.72%), Postives = 255/290 (87.93%), Query Frame = 1
Query:    7 TTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            + E  A+EL+  G YQLAIVIP+NLS DL  K+ ENV+ I+ KFG++   ++ +K+ I  KEV+LYFDPATQ++F++SIKSGI+QM++K+ET++IY+AFQE++ EDP E+IFDTESFISFKEI+P     A+IPNSTQHNIPAW+LFAIFFIILPLSINMVKEKNQGTFVRLRT+P++YATVLGGK +V+L VSL+QF LMLL+G+Y FP IGLP+LD+SG++ LLF+VAFFAGLAA+GLGLLLGTIAKSQEQ+APFGATFVVILAA+GGVWVPVFAMP  MQTLS LSP
Sbjct:   84 SNENQAQELIQNGKYQLAIVIPENLSDDLNLKIAENVSGILEKFGVDEGELSAEKSNIKAKEVKLYFDPATQFSFRNSIKSGINQMVSKIETKTIYKAFQEEISEDPYEEIFDTESFISFKEIIPNSGKQAMIPNSTQHNIPAWSLFAIFFIILPLSINMVKEKNQGTFVRLRTHPVAYATVLGGKALVFLVVSLVQFALMLLVGIYLFPLIGLPQLDVSGRLPLLFVVAFFAGLAAVGLGLLLGTIAKSQEQTAPFGATFVVILAAIGGVWVPVFAMPKLMQTLSNLSP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: M7MII9_9FLAO (ABC-type multidrug transport system, permease component n=4 Tax=Xanthomarina TaxID=1868329 RepID=M7MII9_9FLAO)

HSP 1 Score: 419 bits (1076), Expect = 2.000e-143
Identity = 211/292 (72.26%), Postives = 255/292 (87.33%), Query Frame = 1
Query:    1 LSTTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            L  TE +AK LVFKG YQLAIVIP+NLS  LEQKV +NV  I++KFG+E ++ +  K  +  KEV+LYFDPATQ +FKSS+K+GID+M++K+ETQSIY+AFQEQ+ +DP+E IF+TE+FI+FKEI+P+     +IPNS QHN+PAWTLFAIFFII+PLSIN+VKEK+QGTFVRLRTNP+SYATVLGGKT++YL V LIQF LMLL+G+Y FP+IGLP LD+SG++ LLF+VA FAGLAAIGLGLLLGTIAK+QEQSAPFGATFVVILAALGGVWVPVF MP FMQTLS +SP
Sbjct:   82 LENTEEAAKNLVFKGAYQLAIVIPENLSSGLEQKVAQNVDGIISKFGLEEETDSLTKIPVESKEVKLYFDPATQVSFKSSVKNGIDKMVSKIETQSIYKAFQEQITDDPTEVIFETENFITFKEILPKTDNKDIIPNSVQHNVPAWTLFAIFFIIVPLSINIVKEKSQGTFVRLRTNPVSYATVLGGKTLIYLTVCLIQFVLMLLVGLYVFPAIGLPTLDVSGRLPLLFVVAIFAGLAAIGLGLLLGTIAKTQEQSAPFGATFVVILAALGGVWVPVFIMPKFMQTLSNISP 373          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: A0A3G2LAQ4_9FLAO (ABC transporter permease n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A3G2LAQ4_9FLAO)

HSP 1 Score: 419 bits (1076), Expect = 2.070e-143
Identity = 214/290 (73.79%), Postives = 255/290 (87.93%), Query Frame = 1
Query:   10 TEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDA-LIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            TE  A+ LV  GDYQLAIVIPQNLS +L+QKV+ENV+ I+ +FG+E ++I   K+ I  KEV+LYFDPATQ +F+++IKSGIDQM++K+ET+SIY+AFQE+L +DP EKIFDT+ FI+FKEI P   ++  +IPNSTQHNIPAWTLFAIFFIILPLSINMVKEKN GTFVRLRTNP+SYATVLGGKTIV+L V+LIQF LML++GVY FP +GLP+L ++GK++ LFLVAFFAGLAA+GLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMP FMQ LS +SP
Sbjct:   85 TEEKAEALVQNGDYQLAIVIPQNLSKNLKQKVEENVSGILDRFGMEEENIPLAKSIIEPKEVKLYFDPATQISFRNAIKSGIDQMVSKIETESIYKAFQEELTDDPQEKIFDTQPFITFKEIAPGSVSENNVIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNLGTFVRLRTNPVSYATVLGGKTIVFLSVALIQFALMLIVGVYLFPLLGLPQLSVAGKLSFLFLVAFFAGLAAVGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPKFMQVLSGISP 374          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: A0A428K4M3_9FLAO (ABC transporter permease n=1 Tax=Mangrovimonas spongiae TaxID=2494697 RepID=A0A428K4M3_9FLAO)

HSP 1 Score: 418 bits (1075), Expect = 2.740e-143
Identity = 211/288 (73.26%), Postives = 252/288 (87.50%), Query Frame = 1
Query:   13 EASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            E  AK+LVFKG YQLAIVIP  L+  L+ K+D+NV  ++AKF +E ++  ++ T I QKEVRLYFDPATQ +FKSS+K+GID+MI+K+ETQSIYQAFQEQ+ +DPSEKIF+T+SFI+FKE++PE   +  IPNS QHN+PAWTLFAIFFII+PLSIN+VKEK+QGTFVRLRTNP+SYATVLGGKTI+YL V LIQF LMLL+GVY FP+IGLP LD+SG++ LLF+VAFFAGLAAIGLGLLLGTIAK+QEQSAPFGAT VVILAA+GGVWVPVF MP  MQTLS +SP
Sbjct:   86 ETEAKDLVFKGKYQLAIVIPDGLTTGLQSKIDQNVEELLAKFSLE-ENTKKENTVIEQKEVRLYFDPATQLSFKSSVKNGIDKMISKIETQSIYQAFQEQISDDPSEKIFETDSFITFKEVLPENKQEDYIPNSVQHNVPAWTLFAIFFIIVPLSINIVKEKSQGTFVRLRTNPVSYATVLGGKTIIYLIVCLIQFILMLLVGVYLFPAIGLPTLDVSGRLPLLFIVAFFAGLAAIGLGLLLGTIAKTQEQSAPFGATLVVILAAMGGVWVPVFIMPKIMQTLSHISP 372          
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Match: UPI00040B271A (ABC transporter permease n=1 Tax=Aquimarina muelleri TaxID=279356 RepID=UPI00040B271A)

HSP 1 Score: 418 bits (1075), Expect = 2.930e-143
Identity = 215/289 (74.39%), Postives = 252/289 (87.20%), Query Frame = 1
Query:   13 EASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEADSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQAFQEQLGE-DPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFAIFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQFGLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIAKSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP 876
            E  AK+LVFKGDYQLAI+IP+ LS+DL++KV++NV  I+AKFG+E D   + K  I  KEVRLYFDPATQ  FKSS+K+GID+MI+K+ETQSIY+AFQ+Q+ E D +E IF+T+SFISFKEIVP+     +IPNS QHNIPAWTLFAIFFII+PLSIN+VKEKNQGTFVRLRTNP+SYATVLGGKTIVYL V LIQF LMLLIG++ FP +GLP LD++G++  LF+VAFFAGLAAIGLGLLLGTIAK+QEQSAPFGATFVVILAALGGVWVPVF MP FMQTLS +SP
Sbjct:   86 EEEAKDLVFKGDYQLAIIIPEKLSLDLDKKVNQNVEGILAKFGLEEDVEVEIKETILNKEVRLYFDPATQQTFKSSVKNGIDKMISKIETQSIYKAFQDQVSEGDDTEAIFETDSFISFKEIVPKKGDKEIIPNSVQHNIPAWTLFAIFFIIVPLSINIVKEKNQGTFVRLRTNPVSYATVLGGKTIVYLVVCLIQFVLMLLIGIFLFPKMGLPTLDVAGRLFNLFIVAFFAGLAAIGLGLLLGTIAKTQEQSAPFGATFVVILAALGGVWVPVFVMPKFMQTLSNISP 374          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16166.3532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PU37_9FLAO6.440e-15981.79ABC-2 transporter permease n=1 Tax=Maribacter alga... [more]
A0A831QJS7_9FLAO6.440e-14774.32ABC transporter permease n=2 Tax=root TaxID=1 RepI... [more]
A0A7K0E758_9FLAO1.840e-14672.92ABC transporter permease subunit n=1 Tax=Kriegella... [more]
A0A1G6WAL5_9FLAO1.500e-14573.63ABC-2 type transport system permease protein n=1 T... [more]
G0LBJ2_ZOBGA4.270e-14572.60ABC-2 type exporter, permease component n=14 Tax=Z... [more]
UPI00193ADC644.940e-14471.72ABC transporter permease n=1 Tax=Aurantibacter cra... [more]
M7MII9_9FLAO2.000e-14372.26ABC-type multidrug transport system, permease comp... [more]
A0A3G2LAQ4_9FLAO2.070e-14373.79ABC transporter permease n=2 Tax=Flavobacteriaceae... [more]
A0A428K4M3_9FLAO2.740e-14373.26ABC transporter permease n=1 Tax=Mangrovimonas spo... [more]
UPI00040B271A2.930e-14374.39ABC transporter permease n=1 Tax=Aquimarina muelle... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig16166contigE-siliculosus-1a_F_contig16166:3..878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size876
Model size876
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00002,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.V
EggNOG OGs1HYPT@117743,4NGFA@976,COG0842@1,COG0842@2
EggNOG free text desc.Transporter
KEGG ModuleM00254
KEGG TC3.A.1
KEGG koko:K01992
Seed eggNOG ortholog143224.JQMD01000002_gene3503
Seed ortholog evalue8.2e-117
Seed ortholog score426.8
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928131.6850429-CDS-E-siliculosus-1a_F_contig16166:2..8781622928131.6850429-CDS-E-siliculosus-1a_F_contig16166:2..878Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16166 3..878 +
1696318816.7222013-CDS-E-siliculosus-1a_F_contig16166:2..8781696318816.7222013-CDS-E-siliculosus-1a_F_contig16166:2..878Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig16166 3..878 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig16166.3532.1prot_E-siliculosus-1a_F_contig16166.3532.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig16166 3..878 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig16166.3532.1

>prot_E-siliculosus-1a_F_contig16166.3532.1 ID=prot_E-siliculosus-1a_F_contig16166.3532.1|Name=mRNA_E-siliculosus-1a_F_contig16166.3532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=292bp
LSTTEASAKELVFKGDYQLAIVIPQNLSIDLEQKVDENVASIMAKFGIEA
DSITQKKTEIAQKEVRLYFDPATQYAFKSSIKSGIDQMIAKVETQSIYQA
FQEQLGEDPSEKIFDTESFISFKEIVPEGTTDALIPNSTQHNIPAWTLFA
IFFIILPLSINMVKEKNQGTFVRLRTNPISYATVLGGKTIVYLGVSLIQF
GLMLLIGVYFFPSIGLPKLDISGKITLLFLVAFFAGLAAIGLGLLLGTIA
KSQEQSAPFGATFVVILAALGGVWVPVFAMPSFMQTLSKLSP
back to top

mRNA from alignment at E-siliculosus-1a_F_contig16166:3..878+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig16166.3532.1 ID=mRNA_E-siliculosus-1a_F_contig16166.3532.1|Name=mRNA_E-siliculosus-1a_F_contig16166.3532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=876bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16166:3..878+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTAAGTACAACAGAGGCTAGCGCTAAAGAGCTTGTTTTTAAGGGTGACTA TCAACTAGCTATTGTTATTCCTCAAAACCTTTCCATTGATTTAGAACAAA AGGTGGATGAGAATGTAGCGAGCATTATGGCCAAGTTCGGTATAGAAGCT GATAGTATTACTCAAAAGAAAACCGAAATAGCCCAAAAGGAAGTCCGGCT CTATTTTGACCCTGCTACCCAATATGCTTTCAAAAGTTCGATCAAGAGTG GTATAGATCAAATGATTGCTAAAGTAGAAACACAAAGCATATATCAAGCA TTTCAAGAGCAGTTGGGTGAAGACCCTTCTGAGAAAATTTTTGACACCGA AAGTTTTATTTCTTTTAAAGAAATAGTTCCCGAGGGTACCACTGATGCCT TAATTCCAAATTCCACCCAACACAACATCCCTGCTTGGACGCTCTTTGCA ATTTTCTTCATCATTCTCCCCTTATCCATCAATATGGTAAAAGAGAAGAA CCAAGGAACTTTTGTTCGGCTGCGTACGAATCCTATTTCATATGCTACGG TTTTAGGTGGAAAGACCATCGTTTATTTAGGTGTTTCTTTAATCCAATTC GGTTTGATGCTACTCATTGGAGTTTATTTTTTCCCAAGTATTGGATTACC AAAACTGGATATCTCTGGTAAAATAACACTGCTTTTTTTAGTTGCCTTTT TTGCTGGTTTAGCTGCGATAGGTTTAGGGCTTTTATTAGGTACTATCGCA AAATCGCAAGAACAATCTGCACCTTTTGGAGCAACTTTTGTTGTCATATT GGCGGCCTTAGGCGGGGTTTGGGTTCCGGTATTTGCTATGCCAAGTTTTA TGCAAACCTTGTCAAAATTATCCCCC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16166:3..878+

>mRNA_E-siliculosus-1a_F_contig16166.3532.1 ID=mRNA_E-siliculosus-1a_F_contig16166.3532.1|Name=mRNA_E-siliculosus-1a_F_contig16166.3532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1752bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16166:3..878+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTAAGTACAACAGAGGCTAGCGCTAAAGAGCTTGTTTTTAAGGGTGACTA
TCAACTAGCTATTGTTATTCCTCAAAACCTTTCCATTGATTTAGAACAAA
AGGTGGATGAGAATGTAGCGAGCATTATGGCCAAGTTCGGTATAGAAGCT
GATAGTATTACTCAAAAGAAAACCGAAATAGCCCAAAAGGAAGTCCGGCT
CTATTTTGACCCTGCTACCCAATATGCTTTCAAAAGTTCGATCAAGAGTG
GTATAGATCAAATGATTGCTAAAGTAGAAACACAAAGCATATATCAAGCA
TTTCAAGAGCAGTTGGGTGAAGACCCTTCTGAGAAAATTTTTGACACCGA
AAGTTTTATTTCTTTTAAAGAAATAGTTCCCGAGGGTACCACTGATGCCT
TAATTCCAAATTCCACCCAACACAACATCCCTGCTTGGACGCTCTTTGCA
ATTTTCTTCATCATTCTCCCCTTATCCATCAATATGGTAAAAGAGAAGAA
CCAAGGAACTTTTGTTCGGCTGCGTACGAATCCTATTTCATATGCTACGG
TTTTAGGTGGAAAGACCATCGTTTATTTAGGTGTTTCTTTAATCCAATTC
GGTTTGATGCTACTCATTGGAGTTTATTTTTTCCCAAGTATTGGATTACC
AAAACTGGATATCTCTGGTAAAATAACACTGCTTTTTTTAGTTGCCTTTT
TTGCTGGTTTAGCTGCGATAGGTTTAGGGCTTTTATTAGGTACTATCGCA
AAATCGCAAGAACAATCTGCACCTTTTGGAGCAACTTTTGTTGTCATATT
GGCGGCCTTAGGCGGGGTTTGGGTTCCGGTATTTGCTATGCCAAGTTTTA
TGCAAACCTTGTCAAAATTATCCCCCCTAAGTACAACAGAGGCTAGCGCT
AAAGAGCTTGTTTTTAAGGGTGACTATCAACTAGCTATTGTTATTCCTCA
AAACCTTTCCATTGATTTAGAACAAAAGGTGGATGAGAATGTAGCGAGCA
TTATGGCCAAGTTCGGTATAGAAGCTGATAGTATTACTCAAAAGAAAACC
GAAATAGCCCAAAAGGAAGTCCGGCTCTATTTTGACCCTGCTACCCAATA
TGCTTTCAAAAGTTCGATCAAGAGTGGTATAGATCAAATGATTGCTAAAG
TAGAAACACAAAGCATATATCAAGCATTTCAAGAGCAGTTGGGTGAAGAC
CCTTCTGAGAAAATTTTTGACACCGAAAGTTTTATTTCTTTTAAAGAAAT
AGTTCCCGAGGGTACCACTGATGCCTTAATTCCAAATTCCACCCAACACA
ACATCCCTGCTTGGACGCTCTTTGCAATTTTCTTCATCATTCTCCCCTTA
TCCATCAATATGGTAAAAGAGAAGAACCAAGGAACTTTTGTTCGGCTGCG
TACGAATCCTATTTCATATGCTACGGTTTTAGGTGGAAAGACCATCGTTT
ATTTAGGTGTTTCTTTAATCCAATTCGGTTTGATGCTACTCATTGGAGTT
TATTTTTTCCCAAGTATTGGATTACCAAAACTGGATATCTCTGGTAAAAT
AACACTGCTTTTTTTAGTTGCCTTTTTTGCTGGTTTAGCTGCGATAGGTT
TAGGGCTTTTATTAGGTACTATCGCAAAATCGCAAGAACAATCTGCACCT
TTTGGAGCAACTTTTGTTGTCATATTGGCGGCCTTAGGCGGGGTTTGGGT
TCCGGTATTTGCTATGCCAAGTTTTATGCAAACCTTGTCAAAATTATCCC
CC
back to top