mRNA_E-siliculosus-1a_F_contig161.3507.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: D7FNL6_ECTSI (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI) HSP 1 Score: 1081 bits (2795), Expect = 0.000e+0 Identity = 691/754 (91.64%), Postives = 695/754 (92.18%), Query Frame = 1
Query: 424 EHSAQSKRKPHLXXXXXXXXXXXXXXXXLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVALCQGAAEESPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECAKVARHTVGESFHALMTLCQGAPSAAPAHCAKAAFRAGADRXXXXXXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQAQPDGEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDGDVEVLCAADGQPGGEQTADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEQCREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHMDSSTVVRASVALRGSDGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDAGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSKAL 2685
EHS QSKRKPHL LDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRV LCQGAAEESPT XXXXXXXXXXXXXXXXXXXXXXXXXXXXX A SAAPAHCAKAAFRAGADR XXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQ QPD EAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSD DVEVLCAADGQPGGE+TADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVE+CREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIH DSSTVVRASVALRGS+GAVANAHGRFNTSD GVVHFSHLSFSGSGNLTLQFFIDGNDSKD GAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEG SGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGI+VAYV SPSTEPL ALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSKAL
Sbjct: 13 EHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDGNDSKDVGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSKAL 766
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A836CJW3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.020e-47 Identity = 128/317 (40.38%), Postives = 164/317 (51.74%), Query Frame = 1
Query: 1735 GAGAPSASEVEQCREAVPRPSRLHITDLGHEGE--TLFPDQPMHATLEVWDQWGGKIHMDSSTVVRASVALRGSDGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDAGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSK 2679
G GA +A ++E CR A P + + + +L H GE L+ + A LEV DQWG + DS T VRAS+A RGS+GA GR N + DGVV FSHL+FS GNLTL+F D G A++ A RV+ ET+ A R C AV L CP SD A + A E + V W + C L G VA P +A +WY P +E L TG G+PT A ERLG+ ASG ++RRAYYR+SL WHPDRW R+ + RAQ VFELV +AY + + +K
Sbjct: 469 GGGA-TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRF--------DVGGAHLASALLRVV--ETKEAAFARACGAVVRALRCP-------------SDAAA---ARRAAAAELNAADEIFALVPPPLS--WNAIVCGGALRNQGFRVA----PGWRR-AAWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYAELRAGAK 751
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A7S2SUI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.180e-34 Identity = 107/317 (33.75%), Postives = 152/317 (47.95%), Query Frame = 1
Query: 1756 SEVEQCREAVPRPSRLHITDLGHE---GETLFPDQPMHATLEVWDQWGGKIHMDSSTVVRASVALRGSDGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDAGAANVPLAAARVIV---EETEHGAILRRCRAVFSRLACPWPVKGEGTS----GEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSS 2676
S VE CR A PS + I + + G+ +F +H TL+V DQ+G + D+ T+V A++ S GA+ R N S GVV +L FS G L F I GN + RV+V E+ G + + F++L P +S G+ + + + PSS EA+S+ C ++LEE G+ V S +WY P +E L+TG GLPT W RLG+ AS R++R+AYYRQSL+WHPDRW Y +H AQD FE++ +AY +VS S
Sbjct: 7 SLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR----------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMSS-------------CSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 291
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A7S2SUF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA) HSP 1 Score: 144 bits (362), Expect = 6.160e-32 Identity = 107/317 (33.75%), Postives = 152/317 (47.95%), Query Frame = 1
Query: 1756 SEVEQCREAVPRPSRLHITDLGHE---GETLFPDQPMHATLEVWDQWGGKIHMDSSTVVRASVALRGSDGAVANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDAGAANVPLAAARVIV---EETEHGAILRRCRAVFSRLACPWPVKGEGTS----GEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSS 2676
S VE CR A PS + I + + G+ +F +H TL+V DQ+G + D+ T+V A++ S GA+ R N S GVV +L FS G L F I GN + RV+V E+ G + + F++L P +S G+ + + + PSS EA+S+ C ++LEE G+ V S +WY P +E L+TG GLPT W RLG+ AS R++R+AYYRQSL+WHPDRW Y +H AQD FE++ +AY +VS S
Sbjct: 367 SLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGNR----------VQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDHDPLRVQEKVSYMTWPSS---LEAMSS-------------CSRILEEAGVRVT-----SGWGGDLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLS 651
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A5D6XN52_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.160e-11 Identity = 90/325 (27.69%), Postives = 139/325 (42.77%), Query Frame = 1
Query: 1741 GAPSASEVEQCREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHMDSSTVVRASVALRGSDGAVANAHGRFNTSDDGVVHF-SHLSF-SGSGNLTLQFFID-GNDSKDAGAANVPLA------AARV-IVEETEHGAILRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWY-VMTCQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHS--ARAQDVFELVGDAYEWMVSSS 2676
GA + S V +CR VP P+ L I + + L P + L V DQ+G + M S T V++ ++G A D V+H +H +GS T FFI+ G G A P AR+ I E+ + RRCRA+F++L C G Q PS++ V + + V+ C+ E+ + + + ST + A+ +H L T A +P+ AW LG+D A+ ++R AY+R+SL WHPD+W + S RA V+ V AY ++ +
Sbjct: 575 GAVTRSLVLECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFG--VEMQSWTGGYLRVSVTPTEGTAPEA-------GDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTFGPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLEC-------------------GADRTEQPGPSANDTVGEVFHLFELPSRHYLDVLGCEGFWLEHSGGMRVLGATSTRFVLAI--HHASYRFL-TNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAYNELLQDA 868
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: K3WQH3_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH3_GLOUD) HSP 1 Score: 68.9 bits (167), Expect = 3.280e-8 Identity = 72/320 (22.50%), Postives = 134/320 (41.88%), Query Frame = 1
Query: 1762 VEQCREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWG--------GKIHMDSS-TVVRASVALRGSDGA--VANAHGRFNTSDDGVVHFSHLSFSGSGNLTLQFFIDGNDSKDAGAANVPLAAARVIVEETEHGAI-LRRCRAVFSRLACPWPVKGEGTSGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYV--MTCQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRW--VRYAIHSARAQDVFELVGDAYEWMVSS 2673
+++CR AV P+ I + ++ L P+ + +L V DQ+G G +H+ ++ T ++ S+G V +H +G F +SF+ +G + F S + R+ + E + + +RC+A+F+R C S + +D P V S+ +Y+ M+C+ E+ + + + S L + H T A +P + W LG+ A+ ++RRAY+R+SL WHPD+W + A+A+ ++ L+ AY + +S
Sbjct: 404 IQECRYAVATPASTEIAQVSYQCRELIPNCLITISLRVLDQFGEEMPAWTGGYVHIAATPTTDTSNTEHMTSEGRILVGQSHALI---VNGTAVFKDISFAEAGEFIITFRPPSASSSSLIGVFLEEKIVRIRIHEDKLAQLRTKRCKALFARFQC---------SRDDTAD-------PFHVLDLSN---------------RFYLDAMSCEAFWHEHTGGLRFQGTTSQRLLYVI---HRASYHFLTDASIPHAEMSPWACLGLASSANRSQIRRAYHRKSLEWHPDKWSSADTIMLRAQAEKIYALITHAYHVLFNS 686
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A2R5GI11_9STRA (DnaJ family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.270e-8 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 2335 AWYVMT--CQQVLEENGISVAYVSSPSTEPLSALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH-SARAQDVFELVGDA 2652
AW+++ C+ L + G+ + + SP L G L G G+PT + A E LGV+ +A+ +LR+AYYR SL WHPDRWV + ++A DVF+ + A
Sbjct: 1092 AWWLLARGCEDELADIGVQL--LRSPQPIAHGVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATA 1198
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A7S3MAI0_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAI0_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.090e-6 Identity = 37/127 (29.13%), Postives = 54/127 (42.52%), Query Frame = 1
Query: 2431 LW--YHPGIETLETGAGLPTRDQPAWERLGVDRDASG------------------------------------------RELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVSSSK 2679
LW Y G+++L TG G+P + ERLG+ +A G +E+RRAYYR+SL WHPDRW +++ Q FEL+ +AY + + K
Sbjct: 237 LWAEYRLGVDSLWTGVGMPRLEMSPMERLGLSTNAEGLIVSDHPDNDKXXXXXXXXXXXXXXXXSNALGNTRKRERAMQKEIRRAYYRKSLQWHPDRWAGMGMYALPVQAAFELINEAYNSLTNEEK 363
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: A0A2P4YAI0_9STRA (J domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAI0_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 3.780e-5 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 2500 WERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQDVFELVGDAYE 2658
+ERLGV R+A+ R++R AY R +L WHPDRW + + A A+D+F+L+ ++YE
Sbjct: 4 YERLGVPRNATDRQIRSAYKRLALKWHPDRWTNNSANPQEQASAEDIFKLLAESYE 59
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Match: G4YHG0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YHG0_PHYSP) HSP 1 Score: 58.2 bits (139), Expect = 8.520e-5 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 2500 WERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIH---SARAQDVFELVGDAYE 2658
+ERLGV RDA+ R++R AY R +L WHPDRW + + A A+++F+L+ ++YE
Sbjct: 453 YERLGVPRDATERQIRSAYKRLALKWHPDRWANNSTNPQEQASAEEIFKLLAESYE 508 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig161.3507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig161.3507.1 >prot_E-siliculosus-1a_F_contig161.3507.1 ID=prot_E-siliculosus-1a_F_contig161.3507.1|Name=mRNA_E-siliculosus-1a_F_contig161.3507.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=900bp MGSVSKQVRPSPGHKSRSSSKHSRRLCCLLVCAVVVPCSCQGSLRVAKECback to top mRNA from alignment at E-siliculosus-1a_F_contig161:50667..54458- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig161.3507.1 ID=mRNA_E-siliculosus-1a_F_contig161.3507.1|Name=mRNA_E-siliculosus-1a_F_contig161.3507.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3792bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig161:50667..54458- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig161:50667..54458- >mRNA_E-siliculosus-1a_F_contig161.3507.1 ID=mRNA_E-siliculosus-1a_F_contig161.3507.1|Name=mRNA_E-siliculosus-1a_F_contig161.3507.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5400bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig161:50667..54458- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |