mRNA_E-siliculosus-1a_F_contig1606.3482.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: A0A6H5JY02_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY02_9PHAE) HSP 1 Score: 742 bits (1915), Expect = 3.480e-259 Identity = 369/388 (95.10%), Postives = 376/388 (96.91%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTVTFQPPCLVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHHQDSP 1732
+VAQGMVWVWGENGP AGLESALTPAQLIPDLDDKEGIESGRVM+A VGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSV +DSTVTFQPPCLVINEAKDSAGKLLLILYG P+RPGWVRLLGRSAYVHTFAPNSK+AKEQAK DKRNGVKKSRLQATA+VVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAG DSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNRE LFNVYENHTKSCTSCQGALKNVKKMLTTAK AVISFTWAVLRGARAVGTAAAAGSPSA VIN VTARAMLPAVALTFASVGA+K LEKLRGMFYTYSFHHQDSP
Sbjct: 195 KVAQGMVWVWGENGPDAGLESALTPAQLIPDLDDKEGIESGRVMLARVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVSSDSTVTFQPPCLVINEAKDSAGKLLLILYGIPTRPGWVRLLGRSAYVHTFAPNSKKAKEQAKEDKRNGVKKSRLQATANVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGYDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREDLFNVYENHTKSCTSCQGALKNVKKMLTTAKTAAVISFTWAVLRGARAVGTAAAAGSPSARVINTVTARAMLPAVALTFASVGAIKILEKLRGMFYTYSFHHQDSP 582
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: A0A6H5KEF5_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEF5_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 1.210e-164 Identity = 245/391 (62.66%), Postives = 293/391 (74.94%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTVTFQPPCLVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCD---SSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHHQDSP 1732
QVAQG++WVW ENGP AGLESALTP LIP+LDD+EG+ SGRV+ V DLAYGWDT +EN VDP+HV +HHGVAGDRY PIDL+P WPV GF F+F D+ + +TF PPCLV+ E D++G L L+LYG P++PGW RL+GR AYVH +AP SKEAK K +KR G K S L A + +K P WL H T LFL+QD+VFLHHQEK LAS G D SS+YG+AV+ PA ADRAV+A+R+WI HGSGGPAWDK+CD TLP RE+NRE LF+ YE HTK+C++C ALKNV ++L +K V+ FTW +LRGARAV T AA GS SA VINAVTARAMLPAVAL AS+GAVKALEK R ++YTYSFHHQD+P
Sbjct: 174 QVAQGIIWVWAENGPDAGLESALTPPHLIPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENFVDPAHVPSAHHGVAGDRYKDVRPIDLEPDEEWPVTATSGFRFKFDDEVAGTHNKITFVPPCLVLVENADNSGTLKLMLYGIPTKPGWSRLVGRQAYVHKYAPKSKEAKALHKKNKRLGKKTSGLLVAARITSKFPQWLIHATSGLFLYQDMVFLHHQEKTLASVGYDGTRSSSYGRAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREQNREVLFDYYEGHTKTCSTCLRALKNVNRLLAASKTATVVFFTWGLLRGARAVSTPAAVGSRSAGVINAVTARAMLPAVALMLASLGAVKALEKFRSLYYTYSFHHQDNP 564
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: D8LGA1_ECTSI (Rieske (2Fe-2S) region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA1_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 9.300e-150 Identity = 228/391 (58.31%), Postives = 279/391 (71.36%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTVTFQPPCLVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCD---SSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHHQDSP 1732
QVAQ ++WVW ENGP AGLESALTP L+P+LDD+EG+ SGRV+ V DLAYGWDT +EN+VDPSHV +HHGVAGDRY PIDL+P WPV T T V+ E D AG+L + LYG P++PGW RL+GR AYVH +AP SKEAK K +KR G K S L AS+++K+P WL H + +FL+QD+V LHHQ+K LAS G D +S+YG+AV+ PA ADRAV+A+R+WI HGSGGPAWDK+CD TLP RE RE LF+ YE HTK+C++C ALKN+ K+L +K +S TW +LRGARAV T A GS SA V+NAVTARA+LPAVALT AS+GAVK LEKLRG++YTYSFHHQD+P
Sbjct: 111 QVAQDIIWVWAENGPDAGLESALTPPHLLPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENLVDPSHVPCAHHGVAGDRYKDVRPIDLEPDKEWPV-------------------TAT------VLVENADDAGELKMTLYGVPTKPGWCRLVGRQAYVHKYAPKSKEAKALRKENKRLGKKPSELMVAASIMSKIPQWLMHASAGIFLYQDMVLLHHQDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNINKLLAASKTATAVSCTWGLLRGARAVSTPTAVGSRSASVVNAVTARAILPAVALTLASLGAVKVLEKLRGLYYTYSFHHQDNP 476
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: A0A6H5KG92_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG92_9PHAE) HSP 1 Score: 309 bits (792), Expect = 1.500e-91 Identity = 173/394 (43.91%), Postives = 233/394 (59.14%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPCLVINEAKDSAGKLL-LILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVV------TKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHHQD 1726
QVAQ MVWVWG+NGP A L+S LT L+ L+DK+GI+SGRV+ V Q DLAY W+TF ENV+DP+HV VSHHG+ G R P+DL+ + + P TK+GF + A V TF PP LV + GK + L+ Y P+RPGW R+ R + E K DK+ +L A S V + +W+QH+ +F+HQD+ L+HQEKI+AS+G + + ++ P +D+ + LR+WI K GSGGP W K D +LP R N + ++++YE HTK CT+C GALK V++ +T AK + V S TWAVLR A A+ T+ A SP P N V A+AMLP V L AS+ K L LR MFY Y + HQ+
Sbjct: 175 QVAQDMVWVWGKNGPDAVLDSVLTKPALVSALEDKKGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHHGLMGKRSMA-KPLDLEATPQ-PAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELEDGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVG--ENKGDDNKDKKRAPSLLQLVARISPVKLKLAPNEQRAWIQHIFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTACLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILA-SPGTPPSNFVAAKAMLPGVLLMLASLKTTKMLGSLRRMFYVYKYVHQE 563
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: UPI001F54AD60 (Rieske 2Fe-2S domain-containing protein n=1 Tax=Trichocoleus sp. FACHB-40 TaxID=2692870 RepID=UPI001F54AD60) HSP 1 Score: 248 bits (632), Expect = 6.580e-70 Identity = 158/398 (39.70%), Postives = 214/398 (53.77%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPC--LVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAV-----------ALTFASVGAVKALEKLRGMFYTYSFHH 1720
Q QG++WVW E+G A +ES ++IP+L++ +S RV+ DL YGWD FMENV DP+HV VSHHG+ G RY D+ P R + T++GF F + + V FQPPC +++ KD GKL+L LY +P+RPGW R +G +V E K K GV +P WL HV GSLFLHQD VFLH+QEKILA G D + AV+ P + D+ V+A RQW++K GG WD C+ LP +R+++ LF+V+ HT+ C CQ ALKN+ ++ A AV+ F V+ ARAV AA AP+ TA ++L V A+ FA VG + L+K +FY Y F H
Sbjct: 85 QERQGLLWVWAESGQEAQVESQSRAPRIIPELEE----DSDRVVQLFWNVRDLPYGWDFFMENVADPAHVPVSHHGIVGSRYKDAKYYDM-PRIR-EMSTQEGFSFAITPTAPTIEQVVHDFQPPCHMRIVSTFKDG-GKLILALYASPTRPGWCRHIGGQVFVKN---------EAGKRPKGLGV----------FGLPMPIWLGHVLGSLFLHQDAVFLHYQEKILAKRGKD--RWLDAVYTPNSQDKMVIAFRQWLSKRAGGGIPWDSGCNSELPSAQRDKQKLFDVWATHTQHCQVCQDALKNINRLSVLAYVAAVVCFGLGVMVDARAVAMKVAA----APIEQ--TATSVLTVVPPTGFWLALGSAILFAIVGYL--LKKFSRLFYVYEFEH 446
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: A0A8J6SPF2_9CYAN (Rieske 2Fe-2S domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SPF2_9CYAN) HSP 1 Score: 248 bits (632), Expect = 2.430e-69 Identity = 158/398 (39.70%), Postives = 214/398 (53.77%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPC--LVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAV-----------ALTFASVGAVKALEKLRGMFYTYSFHH 1720
Q QG++WVW E+G A +ES ++IP+L++ +S RV+ DL YGWD FMENV DP+HV VSHHG+ G RY D+ P R + T++GF F + + V FQPPC +++ KD GKL+L LY +P+RPGW R +G +V E K K GV +P WL HV GSLFLHQD VFLH+QEKILA G D + AV+ P + D+ V+A RQW++K GG WD C+ LP +R+++ LF+V+ HT+ C CQ ALKN+ ++ A AV+ F V+ ARAV AA AP+ TA ++L V A+ FA VG + L+K +FY Y F H
Sbjct: 135 QERQGLLWVWAESGQEAQVESQSRAPRIIPELEE----DSDRVVQLFWNVRDLPYGWDFFMENVADPAHVPVSHHGIVGSRYKDAKYYDM-PRIR-EMSTQEGFSFAITPTAPTIEQVVHDFQPPCHMRIVSTFKDG-GKLILALYASPTRPGWCRHIGGQVFVKN---------EAGKRPKGLGV----------FGLPMPIWLGHVLGSLFLHQDAVFLHYQEKILAKRGKD--RWLDAVYTPNSQDKMVIAFRQWLSKRAGGGIPWDSGCNSELPSAQRDKQKLFDVWATHTQHCQVCQDALKNINRLSVLAYVAAVVCFGLGVMVDARAVAMKVAA----APIEQ--TATSVLTVVPPTGFWLALGSAILFAIVGYL--LKKFSRLFYVYEFEH 496
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: A0A7Z9C162_9CYAN (Rieske (2Fe-2S) region n=1 Tax=Planktothrix paucivesiculata PCC 9631 TaxID=671071 RepID=A0A7Z9C162_9CYAN) HSP 1 Score: 243 bits (621), Expect = 5.690e-68 Identity = 144/386 (37.31%), Postives = 203/386 (52.59%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPC-LVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHH 1720
Q QG++WVWGE+G A ES L +L+P+L++ S +++ G D+ YGWD FMENV DP+HV VSHHG+ G+RY D+ +R + T+DGF FE + + V FQPPC + I GK++L LY TP+RPGW R G + SK+ K+ A +P+WL HV SLF+HQDLVFLH+QEK LA + + VF+P D+ V+ RQW+ K +GG W +NC+ LPP + N++ LF+V+ HT++C CQ ALKN+ ++ + A++ F AV+ AR V A V L A+ FA+ G L+K +FY Y F H
Sbjct: 132 QERQGLLWVWGESGSQAQQESQLRAPRLVPELEEN----SDQIVKLPWGFRDIPYGWDFFMENVSDPAHVPVSHHGIVGNRYKDAKYYDM--ISRRKISTQDGFAFEIKPTASSLQEAVHDFQPPCHMRIFSTNIDGGKMILALYATPTRPGWCRNFGCQVLI-----KSKQGKKPA--------------GLGFFALSMPTWLNHVLASLFMHQDLVFLHYQEKTLAKR--KDKRWLEEVFIPNPQDKMVITFRQWLEKRAAGGIPWPENCNSNLPPADLNKQQLFDVWTMHTQNCQVCQNALKNINRLTVFSNMAAILCFGLAVMVDARTVHQLMAMPPMGFWV---------LLGSAIAFATSGYF--LKKFSRLFYIYEFEH 479
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: Q3MEA6_TRIV2 (Rieske (2Fe-2S) region n=6 Tax=Nostocaceae TaxID=1162 RepID=Q3MEA6_TRIV2) HSP 1 Score: 243 bits (621), Expect = 8.540e-68 Identity = 148/392 (37.76%), Postives = 203/392 (51.79%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPC-LVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKA------LEKLRGMFYTYSFHH 1720
Q QG++WVW E G A +ES L +++P+L+D SG+V+ + DL YGWD FMENV DP+HV VSHHG+ GDRY D+ P P+ T+DGF FE + + FQPPC + I + G+L+L LY TP+RPGW R +G +V P K+ Q + LP WL HV SLFLHQD+VFLH+QEKI+A + + AV+ P D+ V+ LRQW+ GG W + +PP E++++ LF+V+ HT+ CT CQ ALKN+ ++ A +A I AV+ AR V AA G A + LP V A GA+ L++ +FY Y F H
Sbjct: 141 QERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDN----SGKVIKSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYKDAKFYDMIPVR--PISTQDGFAFEIQPTQGKTVQGIHDFQPPCHMRIVSTSEDGGQLILALYATPTRPGWCRHIGCQVFVKN--PQGKKP-----------------QGLSFFGLPLPVWLVHVLASLFLHQDMVFLHYQEKIIAQK--KNGKWLNAVYTPNPQDKMVITLRQWLKNRAGGGIPWAEGYSSDIPPAEKDKQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAICLFLAVILDARTVAMQAALG---ASIFT-------LPPVGFWLALGGAILLAVVGYQLKRFSRLFYVYEFEH 495
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: A0A8J6XU05_9CYAN (Rieske 2Fe-2S domain-containing protein n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J6XU05_9CYAN) HSP 1 Score: 239 bits (611), Expect = 2.090e-66 Identity = 149/398 (37.44%), Postives = 208/398 (52.26%), Query Frame = 2
Query: 563 SCQVA------QGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPC--LVINEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAA---AGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHH 1720
SC VA QG++WVW E+G A +ES L +++P+L+ +S +V+ DLAYGWD FMENV DP+HV VSHHG+ G RY D+ + T++GF FE + + V FQPPC +++ KD GKL+L+LY TP+RPGW R +G V A + A +P+WL HV GSLFLHQDLVFLH+Q+K LA G + AV+ P D+ +A R+W+ GG W + C + LPP E +++ LF+V+ HT++C CQ ALKN+ ++ A AV+ V+ ARAV AA AG + V+ + FA+VG + L+KL +FY Y F H
Sbjct: 127 SCAVAFPTQERQGLLWVWSESGTHAFVESQLKTPRIVPELEH----DSDKVVQLFWNVRDLAYGWDFFMENVADPAHVPVSHHGIVGSRYKDAKYYDMIRVRE--MSTQEGFSFEITPTAPTIEQAVHDFQPPCHMRIVSTFKDG-GKLILVLYATPTRPGWCRHIGCQVLVKNEAGKPPKG-------------------LAFFALPMPTWLGHVLGSLFLHQDLVFLHYQQKNLAKRG--KGKWLDAVYTPNPQDKMTIAFRKWLENRAGGGIPW-QGCSQNLPPAEEDKQKLFDVWTTHTQNCRVCQNALKNINRLAVLAYVAAVVCLCVGVIVDARAVAMRAALASAGQTATSVLIPPAGFWWALGGTILFATVGYL--LKKLSRLFYVYKFEH 493
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Match: K9QN36_NOSS7 (Rieske (2Fe-2S) domain-containing protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) TaxID=28072 RepID=K9QN36_NOSS7) HSP 1 Score: 239 bits (610), Expect = 2.750e-66 Identity = 146/386 (37.82%), Postives = 202/386 (52.33%), Query Frame = 2
Query: 569 QVAQGMVWVWGENGPGAGLESALTPAQLIPDLDDKEGIESGRVMIASVGQNDLAYGWDTFMENVVDPSHVTVSHHGVAGDRYTGPSPIDLKPSARWPVPTKDGFEFEFRDDSVPADSTV-TFQPPCLV-INEAKDSAGKLLLILYGTPSRPGWVRLLGRSAYVHTFAPNSKEAKEQAKADKRNGVKKSRLQATASVVTKLPSWLQHVTGSLFLHQDLVFLHHQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREALFNVYENHTKSCTSCQGALKNVKKMLTTAKATAVISFTWAVLRGARAVGTAAAAGSPSAPVINAVTARAMLPAVALTFASVGAVKALEKLRGMFYTYSFHH 1720
Q QG++WVW E+G A +ES L +LI +L+D SG+V + DL YGWD FMENV DP+HV VSHHG+ GDRY D+ P + + T++GF F + + + V FQPPC + I G+L+L LY TP+RPGW R +G F NS+ K Q + LP+WL HV SLFLHQD+VFLH+QEK +A + AVF P D+ V+ LRQW+ K GG W + LP E +++ LF+V+ HT+ CT CQ ALKN+K++ +A AV+ A++ AR V AA G + + L + + A +G L++L +FY Y F H
Sbjct: 136 QECQGLLWVWAESGEQAQIESQLRTPRLIAELEDS----SGKVEKSPWNFRDLPYGWDYFMENVADPAHVPVSHHGIVGDRYKDAKYYDMIPVRK--MSTEEGFAFALQPTTGNIEQAVHDFQPPCYMRIATTTKDGGQLILALYATPTRPGWCRHIG----CQVFVKNSQGKKPQ---------------GLSFFGLPLPTWLIHVLASLFLHQDMVFLHYQEKTIAQRR--KGKWLDAVFTPNPQDKMVITLRQWLEKRAGGGIPWAEGYSHDLPTAETDKQKLFDVWTTHTQHCTVCQKALKNIKRLSVSAYVVAVVCLFLAIMLDARVVAMQAALGKSMFAIFPPIGFWLTLGS-GILLAIIGY--QLKRLSRLFYVYEFEH 491 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1606.3482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1606.3482.1 >prot_E-siliculosus-1a_F_contig1606.3482.1 ID=prot_E-siliculosus-1a_F_contig1606.3482.1|Name=mRNA_E-siliculosus-1a_F_contig1606.3482.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=210bp MVGWCACLLAAGLSVASGFHLPASSGAPLRVVSSAAKGSSAVDSDSSPGVback to top mRNA from alignment at E-siliculosus-1a_F_contig1606:2331..20582+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1606.3482.1 ID=mRNA_E-siliculosus-1a_F_contig1606.3482.1|Name=mRNA_E-siliculosus-1a_F_contig1606.3482.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=18252bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1606:2331..20582+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1606:2331..20582+ >mRNA_E-siliculosus-1a_F_contig1606.3482.1 ID=mRNA_E-siliculosus-1a_F_contig1606.3482.1|Name=mRNA_E-siliculosus-1a_F_contig1606.3482.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1260bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1606:2331..20582+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |