mRNA_E-siliculosus-1a_F_contig1604.3477.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: A0A6H5JFQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ1_9PHAE) HSP 1 Score: 678 bits (1749), Expect = 2.230e-235 Identity = 359/437 (82.15%), Postives = 375/437 (85.81%), Query Frame = 3
Query: 45 GM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDGGLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDK--VGSPANL 1349
GM PVEVE+GVCLTSC S TMY XXXXXXX SSNGQGEG SGPEASG RWACDWLD +DENPSPG LDRLVNKRDGGLRGAR++LPRSWDIALTFLEALERGRDPV+M VPKL DSGEEGAKTAEPKL VYQG+TVEELRGKWQETVLELE I+EAVNN ENALEGA SIREFDGSLVRH+TFVFLDVVWLAKILKPLLNHKEEE FDG LKREGILEPRLAQV+WPAGL E+VLPTLASLGLTFPLENDPAEGLVVLLRLDP RPE VREVV+TFRSGLTP LTA WKIFLGV PGAIEKVLTRCC+LG VRT WRSGVLVHGRLG QDE GTFAVVVQYSSDGNELTA VYGDRSSPALWTA+S+V S VRSMLLEFPGLRSRG LECPQHGDAMALT K + SP+ L
Sbjct: 201 GMQPVEVEDGVCLTSCSSMTMYXXXXXXXXCSTSSNGQGEGDSGPEASGRRWACDWLDKKDENPSPGPLDRLVNKRDGGLRGARIMLPRSWDIALTFLEALERGRDPVKMEVPKLVDSGEEGAKTAEPKLDVYQGITVEELRGKWQETVLELEKIDEAVNNTENALEGARSIREFDGSLVRHNTFVFLDVVWLAKILKPLLNHKEEETFDG-------------------------LKREGILEPRLAQVVWPAGLCEFVLPTLASLGLTFPLENDPAEGLVVLLRLDPDRPEHVREVVDTFRSGLTPVLTAGWKIFLGVQPGAIEKVLTRCCDLGGVRTCWRSGVLVHGRLGVQDERGTFAVVVQYSSDGNELTAPVYGDRSSPALWTAVSFVSSVVRSMLLEFPGLRSRGFLECPQHGDAMALTGKGLIASPSVL 612
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE) HSP 1 Score: 582 bits (1500), Expect = 3.500e-200 Identity = 305/447 (68.23%), Postives = 339/447 (75.84%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDG-GLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGEEGA-KTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKVGS 1337
E++CRTWL+ WVR+GM PV +E VCLTSC + + GE +G S G WACDW + ED+ PSP L RLVNK DG GLRG +MVLPRSWDIALT LEALE GRDPVE+ + K D A KTAE K VYQG+TVEEL KWQ TV ELE V NA+NALEGALSIREFDGSLVR D FVFLDVVWLA+ILKPLLNHK++E FDG V LGD GDARITLD P DI SW RLKREG+LEPRLA +WP GLSEYVLPTLASLGLTFPLENDPAEGLVVLLRL P RP V +V+ TF SGLTPA +ASWKIFLGVPPGAIEKVLTRCC LG VRTFWR GVLVHG LG QD TFAVV++YSS GNELTAQ++G S+PA W ALSYV+SAVR ML++FPGLR +GSL+CPQHGDAM + S
Sbjct: 2 EKSCRTWLSGWVRNGMQPVRLEPNVCLTSCFPVRVDE--------------HGERSAGNHVSTGAWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLHKSLDPDRGNATKTAEGKTDVYQGITVEELGTKWQGTVDELERRGITVTNAKNALEGALSIREFDGSLVRRDKFVFLDVVWLARILKPLLNHKDQENFDGCVNLGDTGDARITLDDPLDIASWDRLKREGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLKPTRPGSVGKVIETFCSGLTPAFSASWKIFLGVPPGAIEKVLTRCCGLGRVRTFWRYGVLVHGGLGVQDGRSTFAVVLEYSSAGNELTAQIFGGISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMPFVNMARS 434
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 582 bits (1499), Expect = 7.900e-195 Identity = 300/445 (67.42%), Postives = 346/445 (77.75%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDG-GLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGEEGA-KTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKV 1331
E+A RTWLASWV GM PV +E GVCLTSCC++ + + GE +G AS WACDW D+ D+ P PGL+ RLVNK DG GLRG +MVLPRSWDIALT LEALERGRDPVE+ V LA+ E A +TA + VYQG+TVE LR KWQE V+ L V NA+NALEGALSIREFDGSLVRH+ FVFLDVVWLA+ILKPLLNHK+EE FDG V LGD GD R+TL+ P DI SW RLK +G+LEPRLA+ +WP GLS+YVLPTLASLGLTFPL+NDPA GLVVLLRL+P RPERV +V++TF TPA + SWKIFLGVP GAIEKVLTRCC+LG V+TFWRSGVLVHG LGD+D FAVV++YSS NELTAQ++GD S+PA W ALSYVISAVR MLL+FPGLRSRGSL+CPQHGDAM L +K+
Sbjct: 384 EQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGE--------------NGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKM 814
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 583 bits (1503), Expect = 2.620e-194 Identity = 299/445 (67.19%), Postives = 345/445 (77.53%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDGG-LRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADS-GEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKV 1331
E A R WLASWVRSGM PV +E GVCLTSCC+T + + GE + +A G W CDW D +D+NPSP LL RLVNK DGG LRGA+MV+PRSWDIALT LEALERGRDPVEM V L D+ G + TA K +Y G+T E+LR KWQE + L + V NA+NALEGAL+IREFDGSLVRH+TFVFLDVVWLA+ILKPLLNHK+EE FDG V LGD GD R+TL+ PSDI SW RLK EG+LEPRLA+ +WP GLSEYV+PT+ASLGLTFPLENDPA GLVVLLRL+ RPE V +V++TF TPAL ASWKIFLGVP GAIEKVLTRCC+LG V+TFWRSGVLVHG +G+QD SG FAVV++YS NELTAQ++GD S+PA W ALSYV+SAV MLL+FPGLRSRGSL+CPQHGDAM L + V
Sbjct: 484 ELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCE--------------DGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMV 914
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE) HSP 1 Score: 572 bits (1475), Expect = 9.830e-194 Identity = 316/460 (68.70%), Postives = 342/460 (74.35%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDG-GLRGARMVLPRSWDIALTFLEALERGR------------DPVEMAVPKLADS-GEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQD-ESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKVGS 1337
EEACRTWLA WVR GM PV VE+GVCLTSCC XXXXXXX QG G AS G WACDW DN DEN SP LL RLVNKRDG GLRGA+MVLPRSWDIALT LEALE G DPVEM V +LAD+ G E + AE K Y G+T+EEL+ KW ETV EL + AV N ENALEGALSIREFDGSLVRH+ FVFLDVVWLA++LKPLLNHK+EE ++GSVKLGD GD ITL P DI SW RLK EGILEPRLAQ +WPAGLSEYVLPTL SLGL F L N+PA GLV LLRL GRP RV +V++TFRS T ASWK FLGVPPGAIEKVLTRCC++G VR FWR GVLVHG GD SG FAVV++YSS GNELTAQVYGD S+PA W ALSYVISAVR MLLEFPGL S+GSL CPQHG AM LT GS
Sbjct: 242 EEACRTWLADWVRDGMQPVRVEDGVCLTSCCVXXXXXXXXXXXXK------QGNDSRGNHASKGTWACDWRDNADENSSPNLLHRLVNKRDGSGLRGAQMVLPRSWDIALTVLEALEHGWQAQHRCQTSQRVDPVEMIVRRLADTDGGEAVELAEAKGDAYHGITMEELKAKWNETVRELAKRDIAVTNPENALEGALSIREFDGSLVRHEMFVFLDVVWLARVLKPLLNHKDEESYNGSVKLGDTGDTCITLRDPLDIASWGRLKGEGILEPRLAQAMWPAGLSEYVLPTLLSLGLGFSLGNNPAGGLVALLRLRSGRPARVGKVMDTFRSKNTAVFAASWKFFLGVPPGAIEKVLTRCCSIGGVRAFWRFGVLVHGSFGDGGGSSGIFAVVLEYSSSGNELTAQVYGDASNPAPWVALSYVISAVRVMLLEFPGLHSKGSLRCPQHGGAMPLTTTPGS 695
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 560 bits (1444), Expect = 3.500e-191 Identity = 295/447 (66.00%), Postives = 328/447 (73.38%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRD-GGLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKVGSP 1340
E ACRTWL+SWVR+GM V +E V LTSC + GE G A WACDW D E + SP LL RLVNK D GGLRG +MVLPRSWD+ALTFL++LE GR PVEM + K DS +TA VYQG+TVEEL +WQ TV EL V NAENALEGALSIREFDGSLV H+ FVFLDVVWLA+ILKPLLNHK++E+FDG V LGD GD RITLD PSDI SW RLK EG+LEPRLA IWP GLSEYVLPTLASLGL FPLENDPAEGLVVLLRL P RPE V EV++TF SGLTPA ASWK+FLGVPPGA+EKVLTRCC LG V+TFWR GVLVHG LG QDE TFAVVV+YSS NEL AQV+GD S P W A+SYV+SAV ML++FPGLR +GSL+CPQHGD M +KV P
Sbjct: 320 EHACRTWLSSWVRNGMDSVRLERHVSLTSCFPIGASE--------------HGESRRGNHALKQGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSGATETAGGTTTVYQGITVEELSARWQGTVDELGRRGITVTNAENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGEVIDTFCSGLTPAFRASWKVFLGVPPGAVEKVLTRCCALGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELVAQVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQHGDGMLFVNKVSPP 752
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 565 bits (1456), Expect = 2.000e-190 Identity = 297/462 (64.29%), Postives = 337/462 (72.94%), Query Frame = 3
Query: 3 EEACRTWLASWVRS-------------------GM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDG-GLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLAD-SGEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTD 1325
E+ACRTWL+ WVR+ GM PV +E VCLTS + + G+ +G S G WACDW D ED+ P P L RLVNK DG GLRG + VLPRSWDIALT LEALE GRDPVE + K D GE+ A+TA K VYQG+TVEEL KWQETV ELE V NA+NALEGALS+REFDGSLVR + FVFLDVVWLA+ILKPLLNHK++E FDG V LGD GD ITLD PSDI SW RLK+EG+LEP+LA +WP GLSEYVLPTLASLGLTFPLENDP EGLVVLLRL P RPE V +V++TF SGLTPA +ASWKIFLGVPPGA+EKVLTRCC LG VRTFWR GVLVHG LG QD TFAVV++YSS NELTA+++GD S+PA W ALSYV+SAVR ML++FPGLR +GSL+CPQHGDAM D
Sbjct: 156 EKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDE--------------HGDRSAGNHGSKGGWACDWRDEEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVD 603
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 547 bits (1410), Expect = 2.730e-183 Identity = 290/453 (64.02%), Postives = 329/453 (72.63%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDG-GLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGE-EGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQD--ESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKVGSPANL 1349
E ACR WL+SWVR+G+ PV +E V LTSC T + + GE +G G WACDW D D NPSP LL RLVNK DG GLRG +MVLPRSWDIALT LEALE GRDPVE+ + K D + +TA + +YQG+TVE+L KWQETV LE V NA+NALEGAL IREFDGSL+R++ F+FLDVVWLAKILKPLLNHK++E FDG V LGD GDARITLD PSDI SW RLK +G+LEPRLA IWP GLSEYVLP LA LGLTFPLE+DPA+GLVVLLRL P RPE V ++TF TPAL+ASWKIFLGVPPGAIEKVLTRCC LG VRTFWR GVLVHG LG+ G FAVV++YSS NEL AQ++GD S+PA W LSYV+SAV MLL+FPGLR RGSL CPQHGD M L +K A L
Sbjct: 340 EHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGE--------------HGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLLANKASPVAGL 778
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 541 bits (1394), Expect = 2.520e-180 Identity = 287/444 (64.64%), Postives = 318/444 (71.62%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRD-GGLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKV 1331
E ACR WL++WVR+GM PV +E V LTSC GE +G +AS WACDW E + SP LL RLVNK D GGLRG +MVLPRSWDIALT LEALE GRDPVEM + K DS +T K VYQ + VEEL W+ETV EL V NAENALEGALSIREFDGSLVRH+ FVFLDVVWLA+ILKPLLNHK++ FDG V LGD GDARITLD SDI SW RLK EG+LEPRLA +WP GLSEYVLPTLASLGLTFPLE DP GLVVLLRL+P RP V E ++TF S TPA +ASW+IFLGVPPGAIEKVLTRCC LGDV+TFWR GVLVHG LGD D G FAVV +YSS NELTAQ++GD S+ A W ALSYV SAV ML++FPGLR GSL+CPQHG M KV
Sbjct: 271 EHACRMWLSTWVRNGMDPVRLEPHVSLTSC--------------FPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKV 700
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 4.370e-180 Identity = 285/444 (64.19%), Postives = 325/444 (73.20%), Query Frame = 3
Query: 3 EEACRTWLASWVRSGM*PVEVENGVCLTSCCSTTMYDXXXXXXXXXXSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDRLVNKRDG-GLRGARMVLPRSWDIALTFLEALERGRDPVEMAVPKLADSGEEGAKTAEPKLQVYQGMTVEELRGKWQETVLELETINEAVNNAENALEGALSIREFDGSLVRHDTFVFLDVVWLAKILKPLLNHKEEEIFDGSVKLGDAGDARITLDAPSDIVSWHRLKREGILEPRLAQVIWPAGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLDPGRPERVREVVNTFRSGLTPALTASWKIFLGVPPGAIEKVLTRCCNLGDVRTFWRSGVLVHGRLGDQDESGTFAVVVQYSSDGNELTAQVYGDRSSPALWTALSYVISAVRSMLLEFPGLRSRGSLECPQHGDAMALTDKV 1331
E +CRTWL+ WVR+GM PV +E VCLTSC + + GE +G G WACDW + ED+ PSP L RLVNK DG GLRGA+MVLPRSWD+AL LEALE GRDPVE+ + K + K VYQG+TVEEL KWQETV ELE V N NALEGALSIREFDGSLVRH+ FVFLDVVWL++ILKPLLNHK++ FDG VKLGD GD RITL SDI SW RLK EG+LEPRLA +WP GLSEYVLPTL S+GLTFPLE DP GLVVLLRL+P RPE V EV++TF S TPA +ASW+IFLGVPPGAIEKVLTRCC LGDV+TFWR GVLVHG LGD D G FAVVV+YSS NELTAQ++GD S+PA W ALSYV+SAV ML++FPGLR +G L+CPQHG+ M +KV
Sbjct: 555 ENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGE--------------HGERSAGNHVWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETGGKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKV 984 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1604.3477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1604.3477.1 >prot_E-siliculosus-1a_F_contig1604.3477.1 ID=prot_E-siliculosus-1a_F_contig1604.3477.1|Name=mRNA_E-siliculosus-1a_F_contig1604.3477.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=443bp MYDGGCLPSCCSTSSNGQGEGGSGPEASGGRWACDWLDNEDENPSPGLLDback to top mRNA from alignment at E-siliculosus-1a_F_contig1604:20320..22165+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1604.3477.1 ID=mRNA_E-siliculosus-1a_F_contig1604.3477.1|Name=mRNA_E-siliculosus-1a_F_contig1604.3477.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1846bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1604:20320..22165+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1604:20320..22165+ >mRNA_E-siliculosus-1a_F_contig1604.3477.1 ID=mRNA_E-siliculosus-1a_F_contig1604.3477.1|Name=mRNA_E-siliculosus-1a_F_contig1604.3477.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2658bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1604:20320..22165+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |