mRNA_E-siliculosus-1a_F_contig1601.3461.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: D8LMV2_ECTSI (GSH-dependent dehydroascorbate reductase, monomeric enzymes catalyzing the reduction of DHA into asc n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV2_ECTSI) HSP 1 Score: 648 bits (1672), Expect = 9.500e-233 Identity = 326/329 (99.09%), Postives = 327/329 (99.39%), Query Frame = 1
Query: 40 MVSPTVVASCLALLALARGFVSPIVTRTPGAQIAATSRASSVRHRAVARRGDLSMRKTGKFVLSKKALNDDSGPTSITVNMKSGEMIKEEKKEAPKEEMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARGTQAK 1026
MVSPTVVASCLALLA ARGFVSPIVTRTPGAQIAATSRASSVRHRAVARRGDLSMRKTGKFVLSKKALNDDSGPTSITVNMKSGEMIKEEKKEAPKEEMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKC+KNLNPKEDPMLI DAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARGTQAK
Sbjct: 1 MVSPTVVASCLALLAPARGFVSPIVTRTPGAQIAATSRASSVRHRAVARRGDLSMRKTGKFVLSKKALNDDSGPTSITVNMKSGEMIKEEKKEAPKEEMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCIKNLNPKEDPMLIADAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARGTQAK 329
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A835ZA14_9STRA (Glutathione dehydrogenase (ascorbate) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA14_9STRA) HSP 1 Score: 326 bits (836), Expect = 6.730e-106 Identity = 163/272 (59.93%), Postives = 204/272 (75.00%), Query Frame = 1
Query: 217 KFVLSKKALNDDSGPTSITVNMKSGEMIKEEKKEAPKEEMAKAGPGLLEPD-MELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDA-VAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARGTQAK 1026
KF +S KA G I +N+K+G++ K+ APKE +A PG +E MEL+CKA D +LGDCPFTHY HMVL+YKGLP L P APDAKPDWLVED+EG+MPCLV EAYTES+ IV Y+EYF+PEPTLS + + A +A+A E TSG+F +A+CVKNL+ +D ++ +ELK VDA L+K GP+LCG++LTLADCSFAPKLYH T LA FKNT+I+PD +LHKYMD I++H AF +SSYPPDV+VWGWN+ARGT AK
Sbjct: 61 KFKISPKAQILADGV--IEMNVKTGQITKD----APKEVKNQAKPGSVEVGTMELYCKAGPDSKSLGDCPFTHYAHMVLRYKGLPVTLVPCAPDAKPDWLVEDHEGKMPCLVHDGEAYTESSEIVRYIEYFFPEPTLSPQGASAQMAEAMEATSGLFPLMARCVKNLDAAQDAEMVRAIESELKGVDALLRKNGGPFLCGKDLTLADCSFAPKLYHTKTALAQFKNTIINPDFAALHKYMDTIFAHPAFVESSYPPDVVVWGWNSARGTSAK 326
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A4D9D9T1_9STRA (Glutathione dehydrogenase (ascorbate) n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9T1_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.560e-74 Identity = 115/217 (53.00%), Postives = 151/217 (69.59%), Query Frame = 1
Query: 370 MELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYP-EPTLSIKDS--DAVAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNAR 1011
+EL CKA DG ALGDCPF HYV MVL+YKGL ++L P+ P+ KP+WLVE Y G+MPCLV +EAYT+S I Y+EYF+P E L+++D + + K TSGVFG+ A+ +KN++ ++DP L EL KVD+FL+ KGP+L GE +TL D + APKLYH +AHFKN +I P L +L YM ++ + F +SSYPPDVI WGW NAR
Sbjct: 31 IELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDEKPELAEEVKTATSGVFGAFARYMKNMDKEQDPPLQAALFEELDKVDSFLQTTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHMFDMDIFQESSYPPDVITWGWGNAR 247
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: W7U001_9STRA (Glutathione dehydrogenase (ascorbate) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U001_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.390e-74 Identity = 116/217 (53.46%), Postives = 151/217 (69.59%), Query Frame = 1
Query: 370 MELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYP-EPTLSIKDS--DAVAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNAR 1011
+EL CKA DG ALGDCPF HYV MVL+YKGL ++L P+ P+ KP+WLVE Y G+MPCLV +EAYT+S I Y+EYF+P E L+++D + + K TSGVFG+ A+ +KN++ ++DP L + EL KVD L+K KGP+L GE +TL D + APKLYH +AHFKN +I P L +L YM I+ + F +SSYPPDVI WGW NAR
Sbjct: 99 IELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNAR 315
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A7S2SQ66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ66_9STRA) HSP 1 Score: 211 bits (538), Expect = 9.060e-62 Identity = 116/275 (42.18%), Postives = 162/275 (58.91%), Query Frame = 1
Query: 208 KTGKFVLSKKALNDDSGPTSITVNMKSGEMIKEEKKEAPKEEMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMAELKKVDAFLKKGKGP------YLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARG 1014
K GKF +S A S S+ V SG+ + + +E P+ + A + + LF KA DG ++GDCPF H V MVL+ KGL + L+P APD KP WLV+ Y+G+MPCLV EAYTES++IVDY+ +F+ EP L+ +A A+E TS F +LAK +KN + DP L E EL K+D L+ + ++ G ++DC+ APKLYH HFKN I + +L KY+ +++H AF K+ YP DV++WGW NARG
Sbjct: 19 KKGKFKVSDWAT---SAGDSVVVGDGSGK-TEIQAREQPRVQAAVSSSAKPVQQLHLFVKAGPDGESVGDCPFAHSVRMVLEAKGLEYVLSPCAPDGKPQWLVDGYDGKMPCLVHDGEAYTESSHIVDYLNFFFQEPKLAAP----MAAAQEATSQFFPALAKYLKNTDESADPDLREALETELTKIDMHLQDLQAQHDTEDLFIAGPTFGISDCALAPKLYHMDVAAKHFKNFQIPTECTALEKYLAKVFAHPAFAKTQYPEDVVLWGWGNARG 285
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A7S2SR18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR18_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.000e-61 Identity = 102/221 (46.15%), Postives = 139/221 (62.90%), Query Frame = 1
Query: 370 MELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMAELKKVDAFLKKGKGP------YLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARG 1014
+ LF KA DG ++GDCPF H V MVL+ KGL + L+P APD KP WLV+ Y+G+MPCLV EAYTES++IVDY+ +F+ EP L+ +A A+E TS F +LAK +KN + DP L E EL K+D L+ + ++ G ++DC+ APKLYH HFKN I + +L KY+ +++H AF K+ YP DV++WGW NARG
Sbjct: 6 LHLFVKAGPDGESVGDCPFAHSVRMVLEAKGLEYVLSPCAPDGKPQWLVDGYDGKMPCLVHDGEAYTESSHIVDYLNFFFQEPKLAAP----MAAAQEATSQFFPALAKYLKNTDESADPDLREALETELTKIDMHLQDLQAQHDTEDLFIAGPTFGISDCALAPKLYHMDVAAKHFKNFQIPTECTALEKYLAKVFAHPAFAKTQYPEDVVLWGWGNARG 222
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A7S3KYN6_9STRA (Glutathione dehydrogenase (ascorbate) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYN6_9STRA) HSP 1 Score: 177 bits (450), Expect = 7.570e-49 Identity = 95/233 (40.77%), Postives = 135/233 (57.94%), Query Frame = 1
Query: 331 EMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCVKNLNPKEDPMLIEDAMA---ELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVI--SPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNARG 1014
E+ + G E M L+ KA DG ++GDCPF H+V MVL+ KGL ++L P D KP WLVE Y+G+MP L KE Y ES I +YV++F+ +P L + D + A+ G+F ++AK +K+ P D E A L+K+++ L GPY+ G +L DC APKLYH T + FKN I + ++ YM A++ +F K++YP +VI WGW NARG
Sbjct: 51 EVRREGATPTEGGMTLYLKAGPDGKSVGDCPFAHFVRMVLEEKGLDYELQPCVADTKPAWLVEFYDGKMPALRHRKECYVESDVIAEYVDFFFRDPPLKV-DRPLMEAAETAVEGLFPAIAKYLKH-TPDGDADDGEKKTALERSLEKLNSHLAAVDGPYMTGHSFSLVDCGLAPKLYHMKTGVNGFKNGAIDFATQFPAVDAYMTAVFDRPSFQKTAYPTEVITWGWGNARG 281
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: B7G1X6_PHATC (Glutathione dehydrogenase (ascorbate) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1X6_PHATC) HSP 1 Score: 176 bits (446), Expect = 1.800e-48 Identity = 97/238 (40.76%), Postives = 144/238 (60.50%), Query Frame = 1
Query: 331 EMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLS--IKDSDAVAKAKEVTSGVFGSLAKCVKNLNPKEDP-----MLIEDAMAELKKVDAFLKKGKGPYLCG--EELTLADCSFAPKLYHASTCLAHFKNTVI--SPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNAR 1011
E+ + G E M L+ KAAADG +GDCPF H+V +VL+ KGL ++L P D KP WL E YEG++P L KE Y ES I DY+++F+P+P+L K+ D +A++ SG F S+AK +K++ +D +E + L++ L+ GPYL G E+LTL DCS +PKLYH T + FK+ I + ++++Y+D++ E+F K+ Y DVI+WGW+N R
Sbjct: 30 EIRREGATPTEGGMTLYLKAAADGTLVGDCPFAHFVRLVLEEKGLQYELKPCTEDTKPAWLTEYYEGKLPALRHRKECYVESDVIADYLDFFFPDPSLKGGKKEMD---EAEDAISGFFPSVAKYLKHIPDGDDEDQEMKCSLESVLLRLEE-HLQLENRTGPYLVGNGEKLTLLDCSLSPKLYHLRTGIEAFKDNAIDLAQKFPAVNEYLDSMLKRESFQKTVYDKDVIIWGWSNTR 263
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A7S0AQ91_9STRA (Glutathione dehydrogenase (ascorbate) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AQ91_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.030e-47 Identity = 99/238 (41.60%), Postives = 134/238 (56.30%), Query Frame = 1
Query: 331 EMAKAGPGLLEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCVKNL--NPKEDPMLIEDAMAELKKVDAFLK-----KGKGPYLCGE--ELTLADCSFAPKLYHASTCLAHFKNTVI--SPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNAR 1011
E+ + G L M L+ KA DG ++GDCPF HYV +VL KGL + L P + KP WL++ Y+G MP L KE Y ES I Y+++F+ EP LS K VAKA+EVT G+F S+AK +K+ +ED L M L +++ L + GPY G TL D S APKLYH T L FK I + L YMD++++ ++F S YP + +VWGW+NAR
Sbjct: 17 EIPEEGATPLPGGMTLYLKAGPDGTSVGDCPFAHYVRIVLNEKGLEYDLKPSTQETKPQWLIDYYDGSMPALRHRKECYVESDVIAQYLDFFFQEPPLSDKKR-FVAKAQEVTDGLFPSIAKYLKHTPDGDEEDEALKLSLMDALSRLEDHLGDESDGERTGPYFVGNGSTFTLVDASLAPKLYHMQTGLKEFKGNAIDVAAVFPQLRGYMDSVFARQSFVDSIYPEETVVWGWSNAR 253
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Match: A0A6U3NUI9_9STRA (Glutathione dehydrogenase (ascorbate) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NUI9_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.960e-47 Identity = 90/220 (40.91%), Postives = 129/220 (58.64%), Query Frame = 1
Query: 370 MELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYPEPTLSIKDSDAVAKAKEVTSGVFGSLAKCVKNL--NPKEDPMLIEDAMAELKKVDAFLKKGKGPYLCGE--ELTLADCSFAPKLYHASTCLAHFKNTVI--SPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNAR 1011
M L+ KA DG ++GDCPF HYV +VL KGL + + P D KP WL++ YEG MP L KE YTES I Y+++F+ EP LS K +A +E G F ++AK +K+ +D L ++ L +++ L + GP+L G+ E TLAD S APKL+H L FK+ I S ++ +YM AI+ +F ++ YP + +VWGW+NAR
Sbjct: 1 MTLYIKAGPDGKSVGDCPFAHYVRIVLHEKGLEYDVRPSTQDTKPQWLIDYYEGSMPALRHRKECYTESDVIAQYLDFFFQEPPLSGKKK-LMAATQEAIDGFFPAVAKYLKHTPDGDDDDAALKQNLEGVLGRIEQHLSEKSGPFLVGDGAEFTLADASLAPKLFHMQVGLQKFKDNAINVSEQFPAVQEYMTAIFDRPSFKETLYPEETVVWGWSNAR 219 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1601.3461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1601.3461.1 >prot_E-siliculosus-1a_F_contig1601.3461.1 ID=prot_E-siliculosus-1a_F_contig1601.3461.1|Name=mRNA_E-siliculosus-1a_F_contig1601.3461.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=330bp MVSPTVVASCLALLALARGFVSPIVTRTPGAQIAATSRASSVRHRAVARRback to top mRNA from alignment at E-siliculosus-1a_F_contig1601:7336..14779- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1601.3461.1 ID=mRNA_E-siliculosus-1a_F_contig1601.3461.1|Name=mRNA_E-siliculosus-1a_F_contig1601.3461.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7444bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1601:7336..14779- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1601:7336..14779- >mRNA_E-siliculosus-1a_F_contig1601.3461.1 ID=mRNA_E-siliculosus-1a_F_contig1601.3461.1|Name=mRNA_E-siliculosus-1a_F_contig1601.3461.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1980bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1601:7336..14779- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |