mRNA_E-siliculosus-1a_F_contig160.3453.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: D8LJJ8_ECTSI (Protein phosphatase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ8_ECTSI) HSP 1 Score: 635 bits (1638), Expect = 2.530e-224 Identity = 335/347 (96.54%), Postives = 336/347 (96.83%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKRSNAGKGVAGRRAQRAAEDSESNADSLSQGETSEEAADQATAEPTGGSKET 1387
MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVA ATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDD LPPEECKVSPAPETRSFPRSPQDEFL+VACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDM GSRDNMSAVLVAFPGLKRS GKGVAGRRAQRAAEDSESNADSLSQGETSEEAADQA EPTG SKET
Sbjct: 1 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDALPPEECKVSPAPETRSFPRSPQDEFLVVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDM----GSRDNMSAVLVAFPGLKRSETGKGVAGRRAQRAAEDSESNADSLSQGETSEEAADQAAGEPTGDSKET 343
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A6H5KCZ0_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ0_9PHAE) HSP 1 Score: 409 bits (1052), Expect = 1.410e-137 Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 2
Query: 455 MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDE 1090
MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLE+ALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVA ATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDE
Sbjct: 1 MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLERALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDE 212
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A835ZAX4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX4_9STRA) HSP 1 Score: 347 bits (889), Expect = 1.240e-110 Identity = 182/342 (53.22%), Postives = 237/342 (69.30%), Query Frame = 2
Query: 350 GTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTE--KDTTVLEKALYAAFLACDRSVKASQ---------------------------DANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKRSNAGKGVAGRRAQRAAE 1288
GT LDKPVT+K+TE +T +GL FGASAMQGWRV+MEDSHTI+ + GL HSFVAV+DGHGG++CA YAG+ MMR + T ++ Y ++ +L KALY A+L D +++ + +A +RSG TA+++ +TP H+V+AHAGDSRA++ SG +VAAAT DHKPY+ E+ARIE AGG VSM+RVDGDLAVSRALGDFQYK DL P CKV+ P+T + R+P DE L++ CDG+WDVM+++DC + EIF +GE+ +GLACEE++D CL +GSRDNMS V+VAF LK G+GVAGRRA R AE
Sbjct: 10 GTFLDKPVTDKDTEEDTSEDGLRFGASAMQGWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAYVAQPAGGRNVELLCKALYTAYLDIDEALQKMRSRAFVTLLLPLLLTLLPPVPLLPPQVPEAQSASERSGCTALSAVITPNHIVVAHAGDSRAIICSGGRVAAATEDHKPYDAEEKARIEAAGGHVSMRRVDGDLAVSRALGDFQYKSRDLLPRNCKVTCVPDTLVYRRTPGDELLLLCCDGVWDVMNNDDCQRCAMEIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKAGK-GRGVAGRRAAREAE 350
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA) HSP 1 Score: 314 bits (804), Expect = 1.410e-98 Identity = 170/323 (52.63%), Postives = 221/323 (68.42%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKD-DDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKR--------SNAGKGVAGRRAQRAAE 1288
MGTLLDKP+T KET + NGL +GAS+MQGWRV+MED HTI ++ GL+ HS VAV+DGHGG A +AG+ ++ + + AEY S ++T++LEKAL F+A D +K D GD SG TA+ + +TP+H+V A AGDSR ++ + +V A + DHKP ER RIE AGG VSM+RVDGDLAV+RALGDFQYKD DLP + KV+ P+ R+ PRS DE L++ACDGIWDVMS++DC VR+I+ EGE+ GL CEE+LD CL +GSRDNMS V+V FP + + G GV RR++RA E
Sbjct: 1 MGTLLDKPITTKET-SNVEHNGLTYGASSMQGWRVEMEDQHTIEVHLTGLQDHSLVAVYDGHGGQFAAKFAGKTLVAEFLSSESVAEYNRSGFRETSLLEKALKETFVAVDEKLKTEADVQC-GDCSGCTAICAVITPSHIVCASAGDSRGIMVTSGQVRALSEDHKPDGAIERERIESAGGCVSMRRVDGDLAVARALGDFQYKDRPDLPVDRQKVTCVPDVRTTPRSSGDEVLVLACDGIWDVMSNQDCCDCVRQIYQEGETDSGLVCEELLDTCLTKGSRDNMSVVMVQFPAMLEPPPGTAAGAERGGGVMARRSKRAEE 321
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A4D9CRJ3_9STRA (PPM-type phosphatase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRJ3_9STRA) HSP 1 Score: 283 bits (725), Expect = 8.170e-87 Identity = 158/315 (50.16%), Postives = 216/315 (68.57%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANV-AGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPR-SPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGL--KRSNAGKGVAGRRAQR 1279
MG+ L KP+TEKE+ E+ ++GL FGA+AMQGWRV+MED+HT++ + LEGHSF+AV+DGHGG A YAG++M V T + EY T KD L+ A+++AFL D S+K + + D SG TA+ + +TP+HVV+A+AGDSRAV+ + + + DHKPY + ER RIE AGG+VSM+RVDGDLA+SR+LGDFQ+KD +LPPE KV+ PE + R S +D L++ACDG+WDV + + V +I +GE M L EE+LD CL + S+DNMSAV+V F L + G+GV GRR +R
Sbjct: 1 MGSHLAKPITEKESY-ESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMADFVRRTVAYTEY--KTTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDSEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRR 312
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A6U5FKN3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FKN3_9STRA) HSP 1 Score: 281 bits (720), Expect = 4.360e-86 Identity = 158/315 (50.16%), Postives = 215/315 (68.25%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLE------KALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKD-DDLPPEECKVSPAPETRSFPRSPQ-DEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKRSNAGKGVAGR 1267
MGTLLDKPVTEK TE SNGL++GAS+MQGWRV+MED H + N+ L+G SF AVFDGHGG+ + YA N++R + ET + +Y E +++ ++ AL AFL D ++ + + + +GDRSG T++A VTP H++ A+AGDSRA G + DHKP N E RI++AGG VSM+RVDGDLAVSRALGD QYK +DLP E+ KV+ P+ R + DE++I+ACDGIWDV+S+++ + V +IF+EGE ++G CEE+LD+CL + SRDNM+A +VAFPG+ G GVA R
Sbjct: 1 MGTLLDKPVTEKNTELGE-SNGLKYGASSMQGWRVEMEDEHILATNLPKLDGTSFFAVFDGHGGSFTSYYAKGNLVRLLSETESYTKYVELSQEKRDEMDGLKLFKSALEQAFLNVDVELRETPE-HLKGDRSGCTSIAVAVTPKHIICANAGDSRACYCKGGAAVPLSYDHKPTNSEEHNRIDRAGGYVSMRRVDGDLAVSRALGDLQYKTRNDLPAEQQKVTALPDFIVHERDNRLDEYIIIACDGIWDVVSNDESVEIVSQIFMEGEKNIGFVCEEMLDLCLAKNSRDNMTACVVAFPGVHIGEGG-GVAAR 312
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A7S2PS74_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS74_9STRA) HSP 1 Score: 279 bits (714), Expect = 4.090e-85 Identity = 159/323 (49.23%), Postives = 214/323 (66.25%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY------AESTEKDTTVLEKALYAAFLACDRSVKAS--QDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDD-DLPPEECKVSPAPETRSFPRSPQ-DEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKRSNAGKGVAGRRAQRAA 1285
MG++LDKP+TEKETE + +N + +G S MQGWRV+MEDSHT+V ++ L F +DGHGG+ +AYAG+++M E EF +Y A + + +++ AL AFL D + A +D +P DRSG T + VT H++ ++AGDSRA + + DHKP + E +RI++AGG VSM+RVDGDLAVSRALGDFQYKD DLP EE KV+ P+ +PR P+ DEF++VACDGIWDV+S+++C V++I EGE+ MGL CEE+LD CL SRDNM+A++VAFP K G GVA RR R A
Sbjct: 1 MGSMLDKPITEKETE-KGEANSVVYGVSGMQGWRVEMEDSHTLVGSIPALPTMGFFGCYDGHGGSYTSAYAGDHLMNIFSERPEFKQYLALTQAARDSSEGIDLIKAALNNAFLQIDEKMLAESEEDRDPR-DRSGCTCIVVVVTEKHLICSNAGDSRACYSRDGHAVPLSFDHKPNDAEEHSRIDRAGGYVSMRRVDGDLAVSRALGDFQYKDRADLPAEEQKVTAKPDLIVYPRDPEKDEFMVVACDGIWDVVSNDECVNMVQKILDEGETDMGLVCEEVLDSCLELNSRDNMTALIVAFPSAKFGKGG-GVAARRDARKA 320
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A7S2B8Y2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8Y2_9STRA) HSP 1 Score: 268 bits (686), Expect = 3.770e-81 Identity = 146/309 (47.25%), Postives = 202/309 (65.37%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFP-GLKRSNAGKGVAGRR 1270
MG LLDKP T+ E NG+++G S+MQGWR +MED+HTI + GL H+ AVFDGHGG A YA E+++ + + Y + D +L +AL AFL D +++ A + +RSG TA+A+ ++P+H+V+A+AGDSR+ + G + A + DHKPYN E+ RIE AGG VSMKRVDG+LAVSRALGDFQ+KD +L ++ KV+ P+ RS DEF+I+ACDGIWDVM++E T+ + +GE+S L CEE++ CL + SRDNMS V + FP G + AG+GV G R
Sbjct: 1 MGNLLDKPNTDYLEAEEGEGNGIKYGVSSMQGWRTEMEDAHTITPEIPGLTDHALYAVFDGHGGQYAARYASEHLVDELKIAPSYIAYVDGGNADPALLGQALQEAFLNLDSNLRDETRAM-QNERSGCTAIATVISPSHIVVANAGDSRSAMQVGSETVALSEDHKPYNAEEKNRIEAAGGCVSMKRVDGELAVSRALGDFQFKDANLDAKDTKVTAFPDITIVQRSEADEFVILACDGIWDVMTNEQATKQMTSYCEQGEASPRLMCEEMMCDCLERSSRDNMSVVTLIFPAGEALTKAGEGVMGLR 308
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A485LRV3_9STRA (Aste57867_24961 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRV3_9STRA) HSP 1 Score: 266 bits (679), Expect = 3.840e-80 Identity = 157/314 (50.00%), Postives = 195/314 (62.10%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKD-DDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKRSNAGKGVAGRRAQRAA 1285
MG L P+TEKET G NG+ +G S MQGWR MED+H ++ +G S AVFDGHGG L A + ++ +F E E KDT + AL AFL D + + D SG TA+ASFV TH+++A++GDSR VLA+ V + DHKP N GER RIE AGG V RV+GDLAVSRALGDF YK DL PEE +VS P+ + RS +EFL++ACDGIWDVMS+ED VR + +GE++MGL CEE+LD CL GSRDNMS V+V F G K AG+GV G R +R A
Sbjct: 1 MGNFLSSPLTEKETHAGLG-NGVSYGVSCMQGWRATMEDAHISRTSIPAFDGCSVFAVFDGHGGKLVADESAIKLI-------DFLEKQEVNGKDTEQIGAALSRAFLELDEEHRKLKQIQTGEDHSGCTAIASFVNDTHIIVANSGDSRGVLATDGGVVPMSYDHKPNNPGERQRIENAGGAVRNNRVNGDLAVSRALGDFVYKQRGDLRPEEQQVSAEPDVKIEARSKDNEFLLLACDGIWDVMSNEDACAYVRGLMAQGENNMGLICEEVLDHCLSLGSRDNMSVVIVKFAGAKI-GAGEGVMGIRKERQA 305
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Match: A0A024UCH5_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCH5_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.150e-78 Identity = 159/315 (50.48%), Postives = 200/315 (63.49%), Query Frame = 2
Query: 347 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAAATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKD-DDLPPEECKVSPAPETRSFPRSPQDEFLIVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMCLFQGSRDNMSAVLVAFPGLKRSNAGKGVAGRRAQRAAE 1288
MG L P+TEK+T TG NGLEFG S MQGWR MED+H ++ + S AVFDGHGG L A + +N++ V+E E + KD + ++L AFLA D + ++ D SG TA+A+FVT +V+A++GDSR+VLA+ V + DHKP N GER RIE AGG V RV+GDLAVSRALGDF YK DLP +VS P+ + R+ +DEFL++ACDGIWDVMS+ED VR + +GES+MGL CEE+LD CL GSRDNMS V+V FPG K G GVAG R R AE
Sbjct: 1 MGNFLSSPITEKDTHVGTG-NGLEFGVSCMQGWRATMEDAHVARTSIPAFDRCSIFAVFDGHGGKLVADESAQNLI-DVLEK----EVMDVKNKDD--IGRSLTRAFLALDDDHRRLKEVIGGEDHSGCTAIAAFVTDLFIVVANSGDSRSVLATDGGVIPMSYDHKPNNTGERQRIENAGGSVRNNRVNGDLAVSRALGDFIYKQRPDLPAAAQQVSAEPDVKVAERTKEDEFLLLACDGIWDVMSNEDAVALVRSLMAQGESNMGLICEEVLDHCLSLGSRDNMSIVVVKFPGAKIGQ-GDGVAGIRKIREAE 306 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig160.3453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig160.3453.1 >prot_E-siliculosus-1a_F_contig160.3453.1 ID=prot_E-siliculosus-1a_F_contig160.3453.1|Name=mRNA_E-siliculosus-1a_F_contig160.3453.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=348bp MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANVAGLback to top mRNA from alignment at E-siliculosus-1a_F_contig160:28972..39062+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig160.3453.1 ID=mRNA_E-siliculosus-1a_F_contig160.3453.1|Name=mRNA_E-siliculosus-1a_F_contig160.3453.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10091bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig160:28972..39062+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig160:28972..39062+ >mRNA_E-siliculosus-1a_F_contig160.3453.1 ID=mRNA_E-siliculosus-1a_F_contig160.3453.1|Name=mRNA_E-siliculosus-1a_F_contig160.3453.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2088bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig160:28972..39062+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |