mRNA_E-siliculosus-1a_F_contig160.3450.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5JFQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ1_9PHAE) HSP 1 Score: 437 bits (1123), Expect = 2.370e-137 Identity = 238/325 (73.23%), Postives = 252/325 (77.54%), Query Frame = 2
Query: 293 VGHVFGYKTPTTDETEHLRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
VGH PT DE +LRTHQ TRAGDNLL +AGCPQ SPEIGG GAA VELV +VD+RLDRGVIFQDV+ RFANMQ RYTFSR+SPN QG+E LLERIAATVDR+EGGIQESLM LKRLQAPN P PHLV +DMTL FLCPVDMEKVPCGM GEGYRFRERRS VKKLAPVLQ G DVD+S FLQAVK+GLVEEIVDGALDE LFRV NGDENA ADMQ DA ASYEVLKEFMEK LDRG NT+GLDGY DFREKMQRVSDGRG MVW+RTENVR+WRDSLSSAAPSR
Sbjct: 616 VGHNDYQGCPTRDEIVYLRTHQETRAGDNLLDTAGCPQRSPEIGGQGAAIVELVSIVDVRLDRGVIFQDVETRFANMQSRYTFSRSSPNYQGEEALLERIAATVDRVEGGIQESLMYLKRLQAPNCPCPHLV----------------------EDMTLRFLCPVDMEKVPCGMNGEGYRFRERRSGVKKLAPVLQ------------RGESDVDLSYFLQAVKDGLVEEIVDGALDEGILFRVANGDENAGADMQRDARASYEVLKEFMEK-LDRGNNTEGLDGYTDFREKMQRVSDGRGVMVWLRTENVREWRDSLSSAAPSR 905
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 349 bits (896), Expect = 3.510e-105 Identity = 188/337 (55.79%), Postives = 238/337 (70.62%), Query Frame = 2
Query: 344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERI---------------------AATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
L +A R GD LL + CPQCS + GGLGAAA++LVR VDIRLDR VIF++VKARF ++ +Y+ S + SQ + L+ +I + +D++ QESLM ++ LQAPNY YP LVVVKE+ + GK+S LSKLR L KDMTLHFLCPVDM KVPCG GEGYRF+E R WVKK++PVLQVAVVTA+VAL A GLDV++S+FLQ VK+GLV E+VD LDEEAL R V+GD++ A++Q D ASYE LK+FM+K+ +DR KN + DGYIDFR++M+RV+DGRG MVWVR +NV+KW DS S AAP+R
Sbjct: 461 LFVDKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVARAVRSVKKEMKDGFIMISERLDKVLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 797
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 350 bits (897), Expect = 7.180e-102 Identity = 188/326 (57.67%), Postives = 238/326 (73.01%), Query Frame = 2
Query: 353 HQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPL---LERIAATV----DRIEGGI-------QESLMCLKRLQAPNYPYPHLVVVKEIET-------QGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
+ TR GD +L + C QCSP+ GLGAAA++LVRMVDIRLDR VIF++VKARF +++G+Y+FS ++ +S + L +E +A T+ D ++G + QESLM L+ LQAPNYPYP LV ++EI + +G + LSKLRG+ K+MTLHFLCPVDM KVPCG G+GYRFRE R WVKKL+PVLQVA+VTAKVA+KA GLDVD+SDFL+ V +GLV+E+VD LDE+ L RVV+G+E+ DMQ ASYE L E M K L+R K+ + DGY+DFRE MQR+SDGRG VWVR ENV+KW DS SSAAPSR
Sbjct: 912 NMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGK-LERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPSR 1236
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 340 bits (872), Expect = 3.590e-100 Identity = 189/366 (51.64%), Postives = 235/366 (64.21%), Query Frame = 2
Query: 344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGI--------------------------------------------------QESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
L A R GD LL + CPQCS + GGLGAAA++LVR VDIRLDR VIF DVKARF ++ +Y+ S + SQ + L+ +I ++GG +ESLM ++ LQAPNY YP LVVVKE+ + GK+S LSKLR L KDMTLHFLCPVDM KVPCG GEGYRF+E R WVKK++PVLQVAVVTAKVAL A GLDVD+S+FL+ VK+GLV E+VD +DEEAL R V+GD++ A++Q D ASYE LK+FM+K+ +DR KN + DGYIDFR++M+RV+DGRG MVWVR +NV+KW DS S AAP+R
Sbjct: 600 LFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 965
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE) HSP 1 Score: 339 bits (869), Expect = 4.870e-100 Identity = 172/239 (71.97%), Postives = 196/239 (82.01%), Query Frame = 2
Query: 551 SPNSQGQEPLLERIAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
+P S G++ L + I + RIEGGIQESLMCLK LQ PNYPYPHLVVVKEIETQG R L+K RG+AMKDMTLHFL PVDM KVPCG+ GEGYRFRE R WVKKL+PVLQVAVVTAKVALKA GLDVD+S+FLQAVK G VEE+ D LDEEAL RVV+G+E A AD+Q D SYE LK+FM+K+L+R KN K DGYIDFREKMQR SDG+G +VWVR ENV+KWRDSLS+A+P R
Sbjct: 692 TPGSNGEDVLAQMIRI-LGRIEGGIQESLMCLKNLQGPNYPYPHLVVVKEIETQGNRGLLTKARGIAMKDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATAGLDVDISEFLQAVKEGAVEEVADCTLDEEALSRVVSGEEVAGADLQRDTRVSYEALKKFMDKELNRRKNAKEGDGYIDFREKMQRESDGKGGIVWVRIENVQKWRDSLSTASPLR 929
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 340 bits (873), Expect = 4.420e-99 Identity = 181/329 (55.02%), Postives = 233/329 (70.82%), Query Frame = 2
Query: 344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGI--------------QESLMCLKRLQAPNYPYPHLVVVKEIETQGKRSP-------LSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
L ++ T+AG LL +GCPQCSP+ GLGAAA++LV MVDIRLDR VIF+DVK RF ++ +Y+FS ++ +S ++ L++++ ++ G+ QESLM LK LQA NYPYP LV V+EI + G S L+KLRG+ K+M LHFLCPVDM KVPCG GEGYRFRE R WVKKL+PVLQVAVVTAKVALKA GLDVD+S+FL+ V++G V+E+VD LDE+ L RVV G+E+A +M+ + ASYE L+ FM K L+R K+ + DGY+DFR+ MQR+SDGRG VWVR ENV +W DS S+A PSR
Sbjct: 809 LLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVARTLKDGLDDLKGRLGKVLDSTQESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGK-LERRKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNAVPSR 1136
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 325 bits (833), Expect = 1.340e-92 Identity = 189/400 (47.25%), Postives = 239/400 (59.75%), Query Frame = 2
Query: 344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLER------------------------------------------------------------------------------------IAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
L ++ATR GD L + CPQCS + GGLGAAA++L+R VDIRLDR VIF +VKARF +++ +Y+F+ + + +E L R I+ +D++ QESLM L+ LQAPNY YP LVVVKE+ + +G++S LSKL G+ KDMTL FLCPVDM +VPCG GEGYRF+E RSWVKK++PVLQVAVVTAKVAL A GL VD+SDFL+ VK+GLVEE+VD LD+EAL R V GD+N AD+Q D ASYE LK+FM+K+ ++R KNT+ DGYIDFR++M+RV DGRG MVWVR ENV+KW DS S AAP+R
Sbjct: 913 LFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKVEXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAAPTR 1312
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 321 bits (822), Expect = 1.520e-92 Identity = 179/332 (53.92%), Postives = 225/332 (67.77%), Query Frame = 2
Query: 368 AGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERI------------------------AATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFME-KKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
AGD L CP+CSP+ GLGAAA++L+RMVDIRLDRGVI ++VKARF ++ +Y F+ + +S ++ + ++ A +D++ QESL LK LQAPNY YP LVVVKE+ + GK+S LSKLRGL KDM LHFLCPVDM VPCG GEGY+F+E R+WVK+++P LQV VVTAKVAL A GL+VD+SDFL+ VK+GLVEE+VD LDE+AL R V+GD+ AD+Q D ASYE LK FME ++ R KN + DGYI+FRE+M+R+ DGRG VWVR ENVRKW S SS APSR
Sbjct: 703 AGDKFL-ERRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKMDEVKAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPSR 1032
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE) HSP 1 Score: 313 bits (802), Expect = 4.260e-92 Identity = 183/363 (50.41%), Postives = 230/363 (63.36%), Query Frame = 2
Query: 380 LLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFAN----------------MQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGI-------------------------------------------QESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
LL SAGC QCSP+I G GAAA++L+RMVDIRL+R V+F +VKARF + R+ ++ P SQ Q L+ ++ +E GI QESLM ++ LQAPNY YP LVVVKE+ + GK+S LSKLR L KDMTLHFLCPVDM KVPCG GEGYRF+E R WVKK++PVLQVAVVTAKVAL A GLDVD+S+FL+ VK+GLV E+VD LDE AL R V+GD++ A++Q+D ASYE LK+FM+++ +DR KN + DGYID R++M+RV+DGRG MVWVR +NV+KW DS S AAP+R
Sbjct: 380 LLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEHIFSRPTLSVAVLCLSSRHVCTKQDP-SQEQGELIRKMDDVATAVEVGISNLEGVVKGGFHDTNTELRGVKKEVKDGFSMISGRLDKVLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRLLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQTDTRASYEALKKFMDQEQVDRVKNARDGDGYIDLRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 740
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 318 bits (816), Expect = 2.690e-90 Identity = 181/324 (55.86%), Postives = 222/324 (68.52%), Query Frame = 2
Query: 353 HQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERI----------AATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQG--------KRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFME-KKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
++ RAGD L CP+CSPE GLGAAA++LV +VDIRLDR VIF++VKARF ++ +Y FS + +S+ ++ LL +I +D + QESLM LK LQAPNY YP LVVVK+ G KR SKLRG+ KDMTLHFLCPVDM +VPCG GEGYRFRE R WVKK++PVLQV +VTAKVAL A GL+VDVS FL+ V++GL+ EIVD LDE+AL R V+GD D+Q D ASYE LK FME ++ R KN + DGYIDFR+KM+ + DGRG VW+R ENV+KW DS SS APSR
Sbjct: 982 NKVNRAGDKFL-ERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-FSCPTGSSKTEDELLRKIEDMAIAMKVMTGRLDTVLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSNSSPAPSR 1303 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig160.3450.1 >prot_E-siliculosus-1a_F_contig160.3450.1 ID=prot_E-siliculosus-1a_F_contig160.3450.1|Name=mRNA_E-siliculosus-1a_F_contig160.3450.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp MAFDGVCVGHVFGYKTPTTDETEHLRTHQATRAGDNLLGSAGCPQCSPEIback to top mRNA from alignment at E-siliculosus-1a_F_contig160:8738..12471+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig160.3450.1 ID=mRNA_E-siliculosus-1a_F_contig160.3450.1|Name=mRNA_E-siliculosus-1a_F_contig160.3450.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3734bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig160:8738..12471+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig160:8738..12471+ >mRNA_E-siliculosus-1a_F_contig160.3450.1 ID=mRNA_E-siliculosus-1a_F_contig160.3450.1|Name=mRNA_E-siliculosus-1a_F_contig160.3450.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig160:8738..12471+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |