mRNA_E-siliculosus-1a_F_contig160.3450.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig160.3450.1
Unique NamemRNA_E-siliculosus-1a_F_contig160.3450.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5JFQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ1_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 2.370e-137
Identity = 238/325 (73.23%), Postives = 252/325 (77.54%), Query Frame = 2
Query:  293 VGHVFGYKTPTTDETEHLRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            VGH      PT DE  +LRTHQ TRAGDNLL +AGCPQ SPEIGG GAA VELV +VD+RLDRGVIFQDV+ RFANMQ RYTFSR+SPN QG+E LLERIAATVDR+EGGIQESLM LKRLQAPN P PHLV                      +DMTL FLCPVDMEKVPCGM GEGYRFRERRS VKKLAPVLQ             G  DVD+S FLQAVK+GLVEEIVDGALDE  LFRV NGDENA ADMQ DA ASYEVLKEFMEK LDRG NT+GLDGY DFREKMQRVSDGRG MVW+RTENVR+WRDSLSSAAPSR
Sbjct:  616 VGHNDYQGCPTRDEIVYLRTHQETRAGDNLLDTAGCPQRSPEIGGQGAAIVELVSIVDVRLDRGVIFQDVETRFANMQSRYTFSRSSPNYQGEEALLERIAATVDRVEGGIQESLMYLKRLQAPNCPCPHLV----------------------EDMTLRFLCPVDMEKVPCGMNGEGYRFRERRSGVKKLAPVLQ------------RGESDVDLSYFLQAVKDGLVEEIVDGALDEGILFRVANGDENAGADMQRDARASYEVLKEFMEK-LDRGNNTEGLDGYTDFREKMQRVSDGRGVMVWLRTENVREWRDSLSSAAPSR 905          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 3.510e-105
Identity = 188/337 (55.79%), Postives = 238/337 (70.62%), Query Frame = 2
Query:  344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERI---------------------AATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            L   +A R GD LL  + CPQCS + GGLGAAA++LVR VDIRLDR VIF++VKARF ++  +Y+ S  +  SQ +  L+ +I                     +  +D++    QESLM ++ LQAPNY YP LVVVKE+       +  GK+S LSKLR L  KDMTLHFLCPVDM KVPCG  GEGYRF+E R WVKK++PVLQVAVVTA+VAL A  GLDV++S+FLQ VK+GLV E+VD  LDEEAL R V+GD++  A++Q D  ASYE LK+FM+K+ +DR KN +  DGYIDFR++M+RV+DGRG MVWVR +NV+KW DS S AAP+R
Sbjct:  461 LFVDKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVARAVRSVKKEMKDGFIMISERLDKVLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 797          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 7.180e-102
Identity = 188/326 (57.67%), Postives = 238/326 (73.01%), Query Frame = 2
Query:  353 HQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPL---LERIAATV----DRIEGGI-------QESLMCLKRLQAPNYPYPHLVVVKEIET-------QGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            +  TR GD +L  + C QCSP+  GLGAAA++LVRMVDIRLDR VIF++VKARF +++G+Y+FS ++ +S  +  L   +E +A T+    D ++G +       QESLM L+ LQAPNYPYP LV ++EI +       +G +  LSKLRG+  K+MTLHFLCPVDM KVPCG  G+GYRFRE R WVKKL+PVLQVA+VTAKVA+KA  GLDVD+SDFL+ V +GLV+E+VD  LDE+ L RVV+G+E+   DMQ    ASYE L E M K L+R K+ +  DGY+DFRE MQR+SDGRG  VWVR ENV+KW DS SSAAPSR
Sbjct:  912 NMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGK-LERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPSR 1236          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 3.590e-100
Identity = 189/366 (51.64%), Postives = 235/366 (64.21%), Query Frame = 2
Query:  344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGI--------------------------------------------------QESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            L    A R GD LL  + CPQCS + GGLGAAA++LVR VDIRLDR VIF DVKARF ++  +Y+ S  +  SQ +  L+ +I      ++GG                                                   +ESLM ++ LQAPNY YP LVVVKE+       +  GK+S LSKLR L  KDMTLHFLCPVDM KVPCG  GEGYRF+E R WVKK++PVLQVAVVTAKVAL A  GLDVD+S+FL+ VK+GLV E+VD  +DEEAL R V+GD++  A++Q D  ASYE LK+FM+K+ +DR KN +  DGYIDFR++M+RV+DGRG MVWVR +NV+KW DS S AAP+R
Sbjct:  600 LFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 965          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 4.870e-100
Identity = 172/239 (71.97%), Postives = 196/239 (82.01%), Query Frame = 2
Query:  551 SPNSQGQEPLLERIAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            +P S G++ L + I   + RIEGGIQESLMCLK LQ PNYPYPHLVVVKEIETQG R  L+K RG+AMKDMTLHFL PVDM KVPCG+ GEGYRFRE R WVKKL+PVLQVAVVTAKVALKA  GLDVD+S+FLQAVK G VEE+ D  LDEEAL RVV+G+E A AD+Q D   SYE LK+FM+K+L+R KN K  DGYIDFREKMQR SDG+G +VWVR ENV+KWRDSLS+A+P R
Sbjct:  692 TPGSNGEDVLAQMIRI-LGRIEGGIQESLMCLKNLQGPNYPYPHLVVVKEIETQGNRGLLTKARGIAMKDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATAGLDVDISEFLQAVKEGAVEEVADCTLDEEALSRVVSGEEVAGADLQRDTRVSYEALKKFMDKELNRRKNAKEGDGYIDFREKMQRESDGKGGIVWVRIENVQKWRDSLSTASPLR 929          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 4.420e-99
Identity = 181/329 (55.02%), Postives = 233/329 (70.82%), Query Frame = 2
Query:  344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGI--------------QESLMCLKRLQAPNYPYPHLVVVKEIETQGKRSP-------LSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            L  ++ T+AG  LL  +GCPQCSP+  GLGAAA++LV MVDIRLDR VIF+DVK RF  ++ +Y+FS ++ +S  ++ L++++      ++ G+              QESLM LK LQA NYPYP LV V+EI + G  S        L+KLRG+  K+M LHFLCPVDM KVPCG  GEGYRFRE R WVKKL+PVLQVAVVTAKVALKA  GLDVD+S+FL+ V++G V+E+VD  LDE+ L RVV G+E+A  +M+ +  ASYE L+ FM K L+R K+ +  DGY+DFR+ MQR+SDGRG  VWVR ENV +W DS S+A PSR
Sbjct:  809 LLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVARTLKDGLDDLKGRLGKVLDSTQESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGK-LERRKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNAVPSR 1136          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 1.340e-92
Identity = 189/400 (47.25%), Postives = 239/400 (59.75%), Query Frame = 2
Query:  344 LRTHQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLER------------------------------------------------------------------------------------IAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            L  ++ATR GD  L  + CPQCS + GGLGAAA++L+R VDIRLDR VIF +VKARF +++ +Y+F+  + +   +E  L R                                                                                    I+  +D++    QESLM L+ LQAPNY YP LVVVKE+       + +G++S LSKL G+  KDMTL FLCPVDM +VPCG  GEGYRF+E RSWVKK++PVLQVAVVTAKVAL A  GL VD+SDFL+ VK+GLVEE+VD  LD+EAL R V GD+N  AD+Q D  ASYE LK+FM+K+ ++R KNT+  DGYIDFR++M+RV DGRG MVWVR ENV+KW DS S AAP+R
Sbjct:  913 LFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKVEXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAAPTR 1312          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.520e-92
Identity = 179/332 (53.92%), Postives = 225/332 (67.77%), Query Frame = 2
Query:  368 AGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERI------------------------AATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFME-KKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            AGD  L    CP+CSP+  GLGAAA++L+RMVDIRLDRGVI ++VKARF  ++ +Y F+  + +S  ++  + ++                        A  +D++    QESL  LK LQAPNY YP LVVVKE+       +  GK+S LSKLRGL  KDM LHFLCPVDM  VPCG  GEGY+F+E R+WVK+++P LQV VVTAKVAL A  GL+VD+SDFL+ VK+GLVEE+VD  LDE+AL R V+GD+   AD+Q D  ASYE LK FME ++  R KN +  DGYI+FRE+M+R+ DGRG  VWVR ENVRKW  S SS APSR
Sbjct:  703 AGDKFL-ERRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKMDEVKAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPSR 1032          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 4.260e-92
Identity = 183/363 (50.41%), Postives = 230/363 (63.36%), Query Frame = 2
Query:  380 LLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFAN----------------MQGRYTFSRASPNSQGQEPLLERIAATVDRIEGGI-------------------------------------------QESLMCLKRLQAPNYPYPHLVVVKEI-------ETQGKRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFMEKK-LDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            LL SAGC QCSP+I G GAAA++L+RMVDIRL+R V+F +VKARF                  +  R+  ++  P SQ Q  L+ ++      +E GI                                           QESLM ++ LQAPNY YP LVVVKE+       +  GK+S LSKLR L  KDMTLHFLCPVDM KVPCG  GEGYRF+E R WVKK++PVLQVAVVTAKVAL A  GLDVD+S+FL+ VK+GLV E+VD  LDE AL R V+GD++  A++Q+D  ASYE LK+FM+++ +DR KN +  DGYID R++M+RV+DGRG MVWVR +NV+KW DS S AAP+R
Sbjct:  380 LLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEHIFSRPTLSVAVLCLSSRHVCTKQDP-SQEQGELIRKMDDVATAVEVGISNLEGVVKGGFHDTNTELRGVKKEVKDGFSMISGRLDKVLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRLLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQTDTRASYEALKKFMDQEQVDRVKNARDGDGYIDLRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 740          
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 2.690e-90
Identity = 181/324 (55.86%), Postives = 222/324 (68.52%), Query Frame = 2
Query:  353 HQATRAGDNLLGSAGCPQCSPEIGGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQEPLLERI----------AATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQG--------KRSPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAPVLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFRVVNGDENASADMQSDASASYEVLKEFME-KKLDRGKNTKGLDGYIDFREKMQRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR 1267
            ++  RAGD  L    CP+CSPE  GLGAAA++LV +VDIRLDR VIF++VKARF  ++ +Y FS  + +S+ ++ LL +I             +D +    QESLM LK LQAPNY YP LVVVK+    G        KR   SKLRG+  KDMTLHFLCPVDM +VPCG  GEGYRFRE R WVKK++PVLQV +VTAKVAL A  GL+VDVS FL+ V++GL+ EIVD  LDE+AL R V+GD     D+Q D  ASYE LK FME ++  R KN +  DGYIDFR+KM+ + DGRG  VW+R ENV+KW DS SS APSR
Sbjct:  982 NKVNRAGDKFL-ERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-FSCPTGSSKTEDELLRKIEDMAIAMKVMTGRLDTVLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSNSSPAPSR 1303          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig160.3450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFQ1_9PHAE2.370e-13773.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K516_9PHAE3.510e-10555.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUD0_ECTSI7.180e-10257.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K1K4_9PHAE3.590e-10051.64Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L846_9PHAE4.870e-10071.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC9_ECTSI4.420e-9955.02LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI1.340e-9247.25LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI1.520e-9253.92LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5JYD1_9PHAE4.260e-9250.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI2.690e-9055.86LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig160contigE-siliculosus-1a_F_contig160:8738..12471 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size999
Model size2277
Exons4
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
CAZyGH1
EC3.2.1.21
EggNOG OGs2CYK8@1,2S4YE@2759
GOsGO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG koko:K01188
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
Seed eggNOG ortholog2880.D7FUD0
Seed ortholog evalue1.7e-94
Seed ortholog score352.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig160.3450.1prot_E-siliculosus-1a_F_contig160.3450.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig160 9009..11464 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928115.4600797-UTR-E-siliculosus-1a_F_contig160:8737..90081622928115.4600797-UTR-E-siliculosus-1a_F_contig160:8737..9008Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig160 8738..9008 +
1696318810.0738633-UTR-E-siliculosus-1a_F_contig160:8737..90081696318810.0738633-UTR-E-siliculosus-1a_F_contig160:8737..9008Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig160 8738..9008 +
1622928115.5220032-UTR-E-siliculosus-1a_F_contig160:11464..124711622928115.5220032-UTR-E-siliculosus-1a_F_contig160:11464..12471Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig160 11465..12471 +
1696318810.1342535-UTR-E-siliculosus-1a_F_contig160:11464..124711696318810.1342535-UTR-E-siliculosus-1a_F_contig160:11464..12471Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig160 11465..12471 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928115.471133-CDS-E-siliculosus-1a_F_contig160:9008..92191622928115.471133-CDS-E-siliculosus-1a_F_contig160:9008..9219Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 9009..9219 +
1696318810.0875561-CDS-E-siliculosus-1a_F_contig160:9008..92191696318810.0875561-CDS-E-siliculosus-1a_F_contig160:9008..9219Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 9009..9219 +
1622928115.4842176-CDS-E-siliculosus-1a_F_contig160:9596..96671622928115.4842176-CDS-E-siliculosus-1a_F_contig160:9596..9667Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 9597..9667 +
1696318810.1058724-CDS-E-siliculosus-1a_F_contig160:9596..96671696318810.1058724-CDS-E-siliculosus-1a_F_contig160:9596..9667Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 9597..9667 +
1622928115.4981182-CDS-E-siliculosus-1a_F_contig160:10507..108341622928115.4981182-CDS-E-siliculosus-1a_F_contig160:10507..10834Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 10508..10834 +
1696318810.1155312-CDS-E-siliculosus-1a_F_contig160:10507..108341696318810.1155312-CDS-E-siliculosus-1a_F_contig160:10507..10834Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 10508..10834 +
1622928115.5094657-CDS-E-siliculosus-1a_F_contig160:11074..114641622928115.5094657-CDS-E-siliculosus-1a_F_contig160:11074..11464Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 11075..11464 +
1696318810.1248252-CDS-E-siliculosus-1a_F_contig160:11074..114641696318810.1248252-CDS-E-siliculosus-1a_F_contig160:11074..11464Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig160 11075..11464 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig160.3450.1

>prot_E-siliculosus-1a_F_contig160.3450.1 ID=prot_E-siliculosus-1a_F_contig160.3450.1|Name=mRNA_E-siliculosus-1a_F_contig160.3450.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp
MAFDGVCVGHVFGYKTPTTDETEHLRTHQATRAGDNLLGSAGCPQCSPEI
GGLGAAAVELVRMVDIRLDRGVIFQDVKARFANMQGRYTFSRASPNSQGQ
EPLLERIAATVDRIEGGIQESLMCLKRLQAPNYPYPHLVVVKEIETQGKR
SPLSKLRGLAMKDMTLHFLCPVDMEKVPCGMKGEGYRFRERRSWVKKLAP
VLQVAVVTAKVALKAAGGLDVDVSDFLQAVKNGLVEEIVDGALDEEALFR
VVNGDENASADMQSDASASYEVLKEFMEKKLDRGKNTKGLDGYIDFREKM
QRVSDGRGAMVWVRTENVRKWRDSLSSAAPSR*
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mRNA from alignment at E-siliculosus-1a_F_contig160:8738..12471+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig160.3450.1 ID=mRNA_E-siliculosus-1a_F_contig160.3450.1|Name=mRNA_E-siliculosus-1a_F_contig160.3450.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3734bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig160:8738..12471+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCTGCTTTGCGTAGCCGTTTGACCGTCCAATGCCTACTTGACAACATGTC AAATTTGCCCTATAATACGCCGTTGACGATGCTTTATGAAATCTTGACGC GATATGTGCGTGTGGTCGATTCTTTTGTGTGGCTATCCCTTGGTCGTGGT GAAGGACGTGACCAAGTGAGCTAGCAGACTCACTTTGTTTTCAACAGCGT CGCATTGCAAGCCCTTCAATCCAGAGCTACTAGTAGACCACAACGACTAG CAACGTAGGTGCCTCTTTAGAATGGCCTTCGATGGAGTGTGTGTGGGCCA TGTGTTTGGCTACAAGACGCCAACAACGGACGAAACCGAGCACCTTCGCA CCCACCAGGCAACTCGCGCAGGAGACAACCTTCTGGGCAGCGCTGGATGC CCACAATGTAGTCCCGAGATTGGGGGGCTAGGGGCGGCGGCCGTTGAACT TGTACGCATGGTCGATATCCGACTTGACCGAGGTATAGTGCTTGGGTGAT GTCTACATATGTTTTCATCTCGGTTCCGAGGGAACCAAGTTTGTTCAATC CGCAAATGCTGCATCTCGCATGGGTCTGGTAGTAGCTGCCACCTGCCGGT TTTGGAGCACATTTTGTGCTCGTCGGCACAAGTTTTGGTGTTGATCTTGT CGTCGCCACATGACGACGTTGTCGTGTTTGACAAATGTGTAGGCAACTTC GTGTACTCGTTTTCACCAATCGAACGTGGCTTCAATGGATTGCACCGCAT GTCACTGGGCGCTGATTGGGCTACCCCATGGATTCCTCATGCGTACTGCA AGCGGACAGATGTGGAATGACCCCCGCCCCATGGACTTTCGTCGCGATCA CTCCCACAGGCGTGATTTTCCAAGATGTCAAGGCAAGGTTTGCCAACATG CAGGGCCGGTACACATTCTCTCGTGCGTCGGTGAGCGTGGGGTCCATGGC CGCGTTTGGATACGGTTTTGGCAAGATACTTGATTTATTGTAGTTCCGAC GATGGCTTGCTGCGATGGGTTTGCGGGATGCGGAACAGCGCCTCCCACCA AATACTTGGTGTTGTATTCTACAAGCCCCTTTTTTTGCTCACCTATCATG GCCTTTTTTGCGCTGATGGCAGAAATACTATTATCTTTGCGACCGCCATG ATCACCAAAGTCAGAAAAGTCCATATCAACACCACCATCCTCATGGCAAG TTCTTCGATGGCCACGTCGTACGGTCATGATGTGCTGTTGTGCCGATATC ATTACCCACCACCAATCATACGCGCCCTCTCGCAAGTTTGTTTGTACTTG AACGATTTGCTCCTGCCCATGGCACGTCTCTACTGGTGTGCCGTCTGTGG AGACGGGCTATTTTGTACCGAACTGGCCGAGCCATAGACGGCGAGCCCGG CACTCACTCTTCCCTAACTATATCACCGTTTACCTTGGAGCTTTGTCGCG TTAGAATCGAAAATAAACGTGCACAAGGAGCACAGATACCATGCGCTTCC TCATAGAAGACCAACTCTTCGGCCTGCGTGTAAATGGGTGGTTTGGAAAC ACCGCGCAACAATTGAAACATTAGCAAGCATACCCAGCGTCGAGAACATT TTCCGTGCCTTCCTCCACCTTCGCCTCTTGCTCGCTATTTTTTTAACCGA ACGAAGAGCATGGCATGGATGCACGATTTGTGTAGTCCCATCGCAGCCAT GATGTTCGCGGAGACGGAAGGTGGTCCACCACCCTGATTTTCCCCTGCCG CCATTTTCTTACAATCGCAGCCGAACTCCCAGGGCCAGGAGCCGTTGCTT GAAAGGATTGCCGCCACTGTGGATCGGATTGAGGGAGGCATCCAGGAAAG CCTCATGTGCCTCAAGAGGTTACAGGCCCCAAACTACCCTTATCCGCACC TGGTGGTGGTGAAGGAAATCGAGACTCAGGGAAAGAGGAGCCCTCTCAGC AAGCTTCGCGGCCTAGCGATGAAGGACATGACGCTGCACTTCTTGTGCCC GGTCGACATGGAAAAGGTACCATGCGGCATGAAAGGCGAAGGCTACCGGT TTCGCGAGAGGCGCAGCTGGGTCAAGAAGCTTGCGCCAGTTCTGCAGGTA CGTAAGACACATGTTGTTGTGTCACCTCGCCGATCGCAGGCTAAAGCCTG GTTGGTGCAGATGCGGTTCAATTATTGAGTCGGAGTGTTGGTTGGAGGCA CACCCGCAGACCTTCCCATTGGGGCTTTGATGTCGGAGTTGGTAGATTTG GAGAATAAACTCTGAGAAGTGAGCAACGACGAATTGCTTCCAACCGATCT GTTTCTTTGTTTTTTCACGCGCGCTACGCCGTCCCAGGTGGCAGTGGTGA CCGCGAAGGTCGCCCTGAAAGCAGCTGGGGGGCTGGACGTGGATGTCTCG GACTTCCTGCAGGCCGTCAAGAATGGGCTGGTCGAGGAGATAGTAGACGG TGCTCTCGACGAGGAAGCCCTCTTCCGTGTTGTCAATGGAGACGAAAACG CCAGCGCTGACATGCAAAGCGATGCAAGCGCGTCGTACGAAGTCTTGAAA GAGTTCATGGAGAAGAAACTCGACAGAGGGAAGAACACCAAGGGCCTCGA CGGCTACATAGACTTTCGGGAGAAGATGCAGCGCGTCAGTGACGGACGGG GAGCAATGGTATGGGTGCGTACAGAAAACGTTCGAAAGTGGCGAGACTCT CTCTCTTCTGCTGCACCATCGAGGTAGATGGCGAGTTTCGCTGGTGTACC GATATGTAGAATATTATTGTGGCCGCTACCGTCAGGACCCTCACTGGAGG AGGCCAACAAGAAATACCTGGCGATTGCTGAATGTGGTTTGGGGGCTCGT GGCGGAATCTCCGTACCACAGAAGTGCGATGAAAAATTAAAGAGCACTGT AGAGGAAGACCAAAAGGCAAAAGTTGTGCGCTCTTCACGTGCAAGCTTGT GGCGAGGTGTCATTGATGTCTGTGGTGGGTTCCTGTTTCTGTTGGATTGG CGTCAAAATTGCTTCAGCGGATTCAATATTTTTGCCGCAACGCCATCACT CCGCACCTTGGGTTGTGAATAGTTTGATTTGCGTTGAGGGTTTCAAGATC ATTCCCCCGCAAATCTGGTTGTGGGAGGGAGTGGCCCACGGTAGTGGCTG AAACTTCGTCAAATGGTAACTTGCCGTGTCCAACTCGTTGTAAACCTCGG TCGTCTCTTTGATGCGTCCAAGGTTTGGCGTTTTCTTGTCATCGATTTCT CCAGGGGGCTCTGCGTGTTGGTTGTTTGATTTTCAGCCTGCATCTTTTGC AGGTGTTGCGGACAGAAATTAGGTGTGAGTTACTTCTATCCACACCGTCG CCCTAGCGACTTCGGTAGCTCGCAACGTATTTTCCATGAAGTTCTTCACC CACGGCTACTGTAGCTGGGTTCCGCCCTCAGCAAAGGGCAGTACGTGGCA TGCGACACGCGTACACATATTTCATTGTTTGAAGTCGATGTTCTTTACTT GGATCTCGGAGAAAGGAGGGACGGGATTGTGCCAAGCGAAAGTCCGAGCA GAACCTAGCGTTATGGTCGCTCGGGAAAGGAAGCATTGTTTAGCACATGA GGCTGGTGGGGAGGGGGGAAGCGGAGGAAAGGTTTACAGTTGTAAAAAGT CTGCAGTTCGATCTTTGTATCAAACCTGGTAATAGTACGTTCAAGCGCGA GGCGCGTCTGGGAGCGGAGTCTTCTGAACACAGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig160:8738..12471+

>mRNA_E-siliculosus-1a_F_contig160.3450.1 ID=mRNA_E-siliculosus-1a_F_contig160.3450.1|Name=mRNA_E-siliculosus-1a_F_contig160.3450.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig160:8738..12471+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCTTCGATGGAGTGTGTGTGGGCCATGTGTTTGGCTACAAGACGCC
AACAACGGACGAAACCGAGCACCTTCGCACCCACCAGGCAACTCGCGCAG
GAGACAACCTTCTGGGCAGCGCTGGATGCCCACAATGTAGTCCCGAGATT
GGGGGGCTAGGGGCGGCGGCCGTTGAACTTGTACGCATGGTCGATATCCG
ACTTGACCGAGATGGCCTTCGATGGAGTGTGTGTGGGCCATGTGTTTGGC
TACAAGACGCCAACAACGGACGAAACCGAGCACCTTCGCACCCACCAGGC
AACTCGCGCAGGAGACAACCTTCTGGGCAGCGCTGGATGCCCACAATGTA
GTCCCGAGATTGGGGGGCTAGGGGCGGCGGCCGTTGAACTTGTACGCATG
GTCGATATCCGACTTGACCGAGGCGTGATTTTCCAAGATGTCAAGGCAAG
GTTTGCCAACATGCAGGGCCGGTACACATTCTCTCGTGCGTCGGCGTGAT
TTTCCAAGATGTCAAGGCAAGGTTTGCCAACATGCAGGGCCGGTACACAT
TCTCTCGTGCGTCGCCGAACTCCCAGGGCCAGGAGCCGTTGCTTGAAAGG
ATTGCCGCCACTGTGGATCGGATTGAGGGAGGCATCCAGGAAAGCCTCAT
GTGCCTCAAGAGGTTACAGGCCCCAAACTACCCTTATCCGCACCTGGTGG
TGGTGAAGGAAATCGAGACTCAGGGAAAGAGGAGCCCTCTCAGCAAGCTT
CGCGGCCTAGCGATGAAGGACATGACGCTGCACTTCTTGTGCCCGGTCGA
CATGGAAAAGGTACCATGCGGCATGAAAGGCGAAGGCTACCGGTTTCGCG
AGAGGCGCAGCTGGGTCAAGAAGCTTGCGCCAGTTCTGCAGCCGAACTCC
CAGGGCCAGGAGCCGTTGCTTGAAAGGATTGCCGCCACTGTGGATCGGAT
TGAGGGAGGCATCCAGGAAAGCCTCATGTGCCTCAAGAGGTTACAGGCCC
CAAACTACCCTTATCCGCACCTGGTGGTGGTGAAGGAAATCGAGACTCAG
GGAAAGAGGAGCCCTCTCAGCAAGCTTCGCGGCCTAGCGATGAAGGACAT
GACGCTGCACTTCTTGTGCCCGGTCGACATGGAAAAGGTACCATGCGGCA
TGAAAGGCGAAGGCTACCGGTTTCGCGAGAGGCGCAGCTGGGTCAAGAAG
CTTGCGCCAGTTCTGCAGGTGGCAGTGGTGACCGCGAAGGTCGCCCTGAA
AGCAGCTGGGGGGCTGGACGTGGATGTCTCGGACTTCCTGCAGGCCGTCA
AGAATGGGCTGGTCGAGGAGATAGTAGACGGTGCTCTCGACGAGGAAGCC
CTCTTCCGTGTTGTCAATGGAGACGAAAACGCCAGCGCTGACATGCAAAG
CGATGCAAGCGCGTCGTACGAAGTCTTGAAAGAGTTCATGGAGAAGAAAC
TCGACAGAGGGAAGAACACCAAGGGCCTCGACGGCTACATAGACTTTCGG
GAGAAGATGCAGCGCGTCAGTGACGGACGGGGAGCAATGGTATGGGTGCG
TACAGAAAACGTTCGAAAGTGGCGAGACTCTCTCTCTTCTGCTGCACCAT
CGAGGTAGGTGGCAGTGGTGACCGCGAAGGTCGCCCTGAAAGCAGCTGGG
GGGCTGGACGTGGATGTCTCGGACTTCCTGCAGGCCGTCAAGAATGGGCT
GGTCGAGGAGATAGTAGACGGTGCTCTCGACGAGGAAGCCCTCTTCCGTG
TTGTCAATGGAGACGAAAACGCCAGCGCTGACATGCAAAGCGATGCAAGC
GCGTCGTACGAAGTCTTGAAAGAGTTCATGGAGAAGAAACTCGACAGAGG
GAAGAACACCAAGGGCCTCGACGGCTACATAGACTTTCGGGAGAAGATGC
AGCGCGTCAGTGACGGACGGGGAGCAATGGTATGGGTGCGTACAGAAAAC
GTTCGAAAGTGGCGAGACTCTCTCTCTTCTGCTGCACCATCGAGGTAG
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